RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 FAM135AQ9P2D6 1515 aa19.02■□□□□ 0.64
SHCBP1-204ENST00000565887 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
SHCBP1-204ENST00000565887 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
SHCBP1-204ENST00000565887 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
SHCBP1-204ENST00000565887 RIMS1Q86UR5 1692 aaKnown RBP18.98■□□□□ 0.63
SHCBP1-204ENST00000565887 ZMYM3Q14202 1370 aa18.98■□□□□ 0.63
SHCBP1-204ENST00000565887 KANK1Q14678 1352 aa18.98■□□□□ 0.63
SHCBP1-204ENST00000565887 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
SHCBP1-204ENST00000565887 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
SHCBP1-204ENST00000565887 MROH2AA6NES4 1674 aa18.94■□□□□ 0.62
SHCBP1-204ENST00000565887 SETD1BQ9UPS6 1966 aaKnown RBP18.93■□□□□ 0.62
SHCBP1-204ENST00000565887 CEBPAP49715 358 aaPredicted RBP18.93■□□□□ 0.62
SHCBP1-204ENST00000565887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHCBP1-204ENST00000565887 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
SHCBP1-204ENST00000565887 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
SHCBP1-204ENST00000565887 NPATQ14207 1427 aa18.9■□□□□ 0.62
SHCBP1-204ENST00000565887 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
SHCBP1-204ENST00000565887 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
SHCBP1-204ENST00000565887 PRDM15P57071 1507 aaPredicted RBP18.88■□□□□ 0.61
SHCBP1-204ENST00000565887 ZC3H13Q5T200 1668 aaKnown RBP18.88■□□□□ 0.61
SHCBP1-204ENST00000565887 DEPDC5O75140 1603 aa18.87■□□□□ 0.61
SHCBP1-204ENST00000565887 C3P01024 1663 aa18.87■□□□□ 0.61
SHCBP1-204ENST00000565887 NAIPQ13075 1403 aa18.86■□□□□ 0.61
SHCBP1-204ENST00000565887 ABCC3O15438 1527 aa18.85■□□□□ 0.61
SHCBP1-204ENST00000565887 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
SHCBP1-204ENST00000565887 PZPP20742 1482 aa18.84■□□□□ 0.61
SHCBP1-204ENST00000565887 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
SHCBP1-204ENST00000565887 LMTK2Q8IWU2 1503 aa18.83■□□□□ 0.6
SHCBP1-204ENST00000565887 NUP155O75694 1391 aa18.82■□□□□ 0.6
SHCBP1-204ENST00000565887 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
SHCBP1-204ENST00000565887 UHRF1BP1Q6BDS2 1440 aa18.81■□□□□ 0.6
SHCBP1-204ENST00000565887 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
SHCBP1-204ENST00000565887 UNC13BO14795 1591 aa18.79■□□□□ 0.6
SHCBP1-204ENST00000565887 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
SHCBP1-204ENST00000565887 TNRQ92752 1358 aa18.78■□□□□ 0.6
SHCBP1-204ENST00000565887 SETD5Q9C0A6 1442 aa18.77■□□□□ 0.6
SHCBP1-204ENST00000565887 PREX1Q8TCU6 1659 aa18.77■□□□□ 0.6
SHCBP1-204ENST00000565887 HRCP23327 699 aa18.77■□□□□ 0.6
SHCBP1-204ENST00000565887 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
SHCBP1-204ENST00000565887 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.59
SHCBP1-204ENST00000565887 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
SHCBP1-204ENST00000565887 CEP152O94986 1710 aa18.76■□□□□ 0.59
SHCBP1-204ENST00000565887 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
SHCBP1-204ENST00000565887 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
SHCBP1-204ENST00000565887 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
SHCBP1-204ENST00000565887 IQGAP3Q86VI3 1631 aa18.73■□□□□ 0.59
SHCBP1-204ENST00000565887 SPATA31D1Q6ZQQ2 1576 aa18.72■□□□□ 0.59
SHCBP1-204ENST00000565887 ERVK-7P63135 1459 aa18.72■□□□□ 0.59
SHCBP1-204ENST00000565887 THEMISQ8N1K5 641 aaPredicted RBP18.72■□□□□ 0.59
SHCBP1-204ENST00000565887 EFCAB6Q5THR3 1501 aa18.72■□□□□ 0.59
SHCBP1-204ENST00000565887 TET3O43151 1660 aa18.72■□□□□ 0.59
SHCBP1-204ENST00000565887 TRIM26Q12899 539 aaPredicted RBP18.7■□□□□ 0.58
SHCBP1-204ENST00000565887 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
SHCBP1-204ENST00000565887 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-204ENST00000565887 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-204ENST00000565887 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
SHCBP1-204ENST00000565887 NOS1P29475 1434 aa18.67■□□□□ 0.58
SHCBP1-204ENST00000565887 HSPA2P54652 639 aa18.67■□□□□ 0.58
SHCBP1-204ENST00000565887 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-204ENST00000565887 MYO3AQ8NEV4 1616 aa18.65■□□□□ 0.58
SHCBP1-204ENST00000565887 PKD2Q13563 968 aa18.65■□□□□ 0.58
SHCBP1-204ENST00000565887 IDI1Q13907 227 aa18.65■□□□□ 0.58
SHCBP1-204ENST00000565887 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
SHCBP1-204ENST00000565887 RAB3GAP2Q9H2M9 1393 aa18.65■□□□□ 0.58
SHCBP1-204ENST00000565887 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
SHCBP1-204ENST00000565887 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
SHCBP1-204ENST00000565887 UGGT1Q9NYU2 1555 aa18.62■□□□□ 0.57
SHCBP1-204ENST00000565887 E9PCH4 1651 aa18.61■□□□□ 0.57
SHCBP1-204ENST00000565887 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
SHCBP1-204ENST00000565887 HDGFP51858 240 aaKnown RBP18.61■□□□□ 0.57
SHCBP1-204ENST00000565887 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
SHCBP1-204ENST00000565887 PTPRTO14522 1441 aa18.6■□□□□ 0.57
SHCBP1-204ENST00000565887 EID1Q9Y6B2 187 aa18.58■□□□□ 0.56
SHCBP1-204ENST00000565887 KDM5AP29375 1690 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-204ENST00000565887 SYNMO15061 1565 aa18.56■□□□□ 0.56
SHCBP1-204ENST00000565887 NCKAP5LQ9HCH0 1330 aa18.52■□□□□ 0.56
SHCBP1-204ENST00000565887 UBR1Q8IWV7 1749 aa18.52■□□□□ 0.56
SHCBP1-204ENST00000565887 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
SHCBP1-204ENST00000565887 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.56
SHCBP1-204ENST00000565887 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHCBP1-204ENST00000565887 TMEM2Q9UHN6 1383 aa18.52■□□□□ 0.55
SHCBP1-204ENST00000565887 PIK3C2BO00750 1634 aa18.52■□□□□ 0.55
SHCBP1-204ENST00000565887 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.55
SHCBP1-204ENST00000565887 STRCQ7RTU9 1775 aa18.5■□□□□ 0.55
SHCBP1-204ENST00000565887 TRPM2O94759 1503 aa18.5■□□□□ 0.55
SHCBP1-204ENST00000565887 SLIT1O75093 1534 aa18.49■□□□□ 0.55
SHCBP1-204ENST00000565887 ARHGAP23Q9P227 1491 aa18.49■□□□□ 0.55
SHCBP1-204ENST00000565887 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
SHCBP1-204ENST00000565887 FOXD1Q16676 465 aa18.48■□□□□ 0.55
SHCBP1-204ENST00000565887 MED14O60244 1454 aa18.46■□□□□ 0.55
SHCBP1-204ENST00000565887 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.55
SHCBP1-204ENST00000565887 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
SHCBP1-204ENST00000565887 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.54
SHCBP1-204ENST00000565887 TMEM131LA2VDJ0 1609 aa18.45■□□□□ 0.54
SHCBP1-204ENST00000565887 LTKP29376 864 aa18.45■□□□□ 0.54
SHCBP1-204ENST00000565887 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
SHCBP1-204ENST00000565887 PPP1R15AO75807 674 aaPredicted RBP18.44■□□□□ 0.54
SHCBP1-204ENST00000565887 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
SHCBP1-204ENST00000565887 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
SHCBP1-204ENST00000565887 POLR1AO95602 1720 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms