RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
KNOP1-203ENST00000565844 RRP7BPQ9NSQ0 103 aa22.96■■□□□ 1.27
KNOP1-203ENST00000565844 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
KNOP1-203ENST00000565844 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
KNOP1-203ENST00000565844 HFM1A2PYH4 1435 aa22.94■■□□□ 1.26
KNOP1-203ENST00000565844 SETD1BQ9UPS6 1966 aaKnown RBP22.94■■□□□ 1.26
KNOP1-203ENST00000565844 CLTCQ00610 1675 aaKnown RBP22.93■■□□□ 1.26
KNOP1-203ENST00000565844 A2MP01023 1474 aa22.92■■□□□ 1.26
KNOP1-203ENST00000565844 NAIPQ13075 1403 aa22.92■■□□□ 1.26
KNOP1-203ENST00000565844 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
KNOP1-203ENST00000565844 UHRF1BP1Q6BDS2 1440 aa22.87■■□□□ 1.25
KNOP1-203ENST00000565844 ERBINQ96RT1 1412 aa22.87■■□□□ 1.25
KNOP1-203ENST00000565844 MROH2AA6NES4 1674 aa22.87■■□□□ 1.25
KNOP1-203ENST00000565844 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
KNOP1-203ENST00000565844 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
KNOP1-203ENST00000565844 DHX29Q7Z478 1369 aaKnown RBP22.86■■□□□ 1.25
KNOP1-203ENST00000565844 SETD5Q9C0A6 1442 aa22.86■■□□□ 1.25
KNOP1-203ENST00000565844 GGT6Q6P531 493 aa22.85■■□□□ 1.25
KNOP1-203ENST00000565844 CNTLNQ9NXG0 1405 aa22.83■■□□□ 1.25
KNOP1-203ENST00000565844 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
KNOP1-203ENST00000565844 RAB3GAP2Q9H2M9 1393 aa22.79■■□□□ 1.24
KNOP1-203ENST00000565844 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
KNOP1-203ENST00000565844 DEPDC5O75140 1603 aa22.78■■□□□ 1.24
KNOP1-203ENST00000565844 UNC13BO14795 1591 aa22.77■■□□□ 1.24
KNOP1-203ENST00000565844 KIF3BO15066 747 aa22.76■■□□□ 1.23
KNOP1-203ENST00000565844 MYO3AQ8NEV4 1616 aa22.74■■□□□ 1.23
KNOP1-203ENST00000565844 FBXO41Q8TF61 875 aa22.74■■□□□ 1.23
KNOP1-203ENST00000565844 MROH1Q8NDA8 1641 aa22.74■■□□□ 1.23
KNOP1-203ENST00000565844 PRDM15P57071 1507 aaPredicted RBP22.72■■□□□ 1.23
KNOP1-203ENST00000565844 NPATQ14207 1427 aa22.7■■□□□ 1.22
KNOP1-203ENST00000565844 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
KNOP1-203ENST00000565844 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
KNOP1-203ENST00000565844 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
KNOP1-203ENST00000565844 CEP152O94986 1710 aa22.67■■□□□ 1.22
KNOP1-203ENST00000565844 HRCP23327 699 aa22.67■■□□□ 1.22
KNOP1-203ENST00000565844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.223e-8■■□□□ 13.7
KNOP1-203ENST00000565844 TRIM52Q96A61 297 aa22.66■■□□□ 1.22
KNOP1-203ENST00000565844 KDM5DQ9BY66 1539 aa22.66■■□□□ 1.22
KNOP1-203ENST00000565844 ZC3H13Q5T200 1668 aaKnown RBP22.66■■□□□ 1.22
KNOP1-203ENST00000565844 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
KNOP1-203ENST00000565844 VWDEQ8N2E2 1590 aa22.65■■□□□ 1.22
KNOP1-203ENST00000565844 CEP170BQ9Y4F5 1589 aaPredicted RBP22.65■■□□□ 1.22
KNOP1-203ENST00000565844 NUP155O75694 1391 aa22.65■■□□□ 1.22
KNOP1-203ENST00000565844 KANK1Q14678 1352 aa22.65■■□□□ 1.22
KNOP1-203ENST00000565844 CERKQ8TCT0 537 aa22.64■■□□□ 1.22
KNOP1-203ENST00000565844 CFAP65Q6ZU64 1925 aaKnown RBP22.63■■□□□ 1.21
KNOP1-203ENST00000565844 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
KNOP1-203ENST00000565844 DMRT2Q9Y5R5 561 aa22.62■■□□□ 1.21
KNOP1-203ENST00000565844 FBXO31Q5XUX0 539 aaPredicted RBP22.61■■□□□ 1.21
KNOP1-203ENST00000565844 ABCC3O15438 1527 aa22.61■■□□□ 1.21
KNOP1-203ENST00000565844 PZPP20742 1482 aa22.6■■□□□ 1.21
KNOP1-203ENST00000565844 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
KNOP1-203ENST00000565844 TET3O43151 1660 aa22.6■■□□□ 1.21
KNOP1-203ENST00000565844 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
KNOP1-203ENST00000565844 WASHC2CQ9Y4E1 1318 aa22.59■■□□□ 1.21
KNOP1-203ENST00000565844 PTPRTO14522 1441 aa22.58■■□□□ 1.21
KNOP1-203ENST00000565844 LMTK2Q8IWU2 1503 aa22.58■■□□□ 1.2
KNOP1-203ENST00000565844 EFCAB6Q5THR3 1501 aa22.54■■□□□ 1.2
KNOP1-203ENST00000565844 E9PCH4 1651 aa22.54■■□□□ 1.2
KNOP1-203ENST00000565844 TNRQ92752 1358 aa22.54■■□□□ 1.2
KNOP1-203ENST00000565844 SLC4A1APQ9BWU0 796 aaKnown RBP22.53■■□□□ 1.2
KNOP1-203ENST00000565844 A2ML1A8K2U0 1454 aa22.53■■□□□ 1.2
KNOP1-203ENST00000565844 POLR1AO95602 1720 aaPredicted RBP22.52■■□□□ 1.2
KNOP1-203ENST00000565844 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
KNOP1-203ENST00000565844 LTBP4Q8N2S1 1624 aa22.5■■□□□ 1.19
KNOP1-203ENST00000565844 PLA2R1Q13018 1463 aa22.5■■□□□ 1.19
KNOP1-203ENST00000565844 DHX57Q6P158 1386 aaKnown RBP22.48■■□□□ 1.19
KNOP1-203ENST00000565844 PKD2Q13563 968 aa22.47■■□□□ 1.19
KNOP1-203ENST00000565844 ZNF335Q9H4Z2 1342 aaPredicted RBP22.46■■□□□ 1.19
KNOP1-203ENST00000565844 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
KNOP1-203ENST00000565844 ARHGAP31Q2M1Z3 1444 aa22.45■■□□□ 1.18
KNOP1-203ENST00000565844 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.18
KNOP1-203ENST00000565844 FOXD1Q16676 465 aa22.43■■□□□ 1.18
KNOP1-203ENST00000565844 NEURL4Q96JN8 1562 aa22.43■■□□□ 1.18
KNOP1-203ENST00000565844 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
KNOP1-203ENST00000565844 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
KNOP1-203ENST00000565844 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
KNOP1-203ENST00000565844 NLRP1Q9C000 1473 aa22.4■■□□□ 1.18
KNOP1-203ENST00000565844 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
KNOP1-203ENST00000565844 TRPM2O94759 1503 aa22.36■■□□□ 1.17
KNOP1-203ENST00000565844 UBR1Q8IWV7 1749 aa22.36■■□□□ 1.17
KNOP1-203ENST00000565844 SYNMO15061 1565 aa22.35■■□□□ 1.17
KNOP1-203ENST00000565844 NOS1P29475 1434 aa22.33■■□□□ 1.17
KNOP1-203ENST00000565844 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
KNOP1-203ENST00000565844 ANKRD30BQ9BXX2 1392 aa22.32■■□□□ 1.16
KNOP1-203ENST00000565844 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
KNOP1-203ENST00000565844 IQGAP1P46940 1657 aa22.32■■□□□ 1.16
KNOP1-203ENST00000565844 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
KNOP1-203ENST00000565844 PIK3C2BO00750 1634 aa22.3■■□□□ 1.16
KNOP1-203ENST00000565844 IQSEC2Q5JU85 1478 aa22.29■■□□□ 1.16
KNOP1-203ENST00000565844 CCDC144AA2RUR9 1427 aa22.28■■□□□ 1.16
KNOP1-203ENST00000565844 NPHP4O75161 1426 aaPredicted RBP22.28■■□□□ 1.16
KNOP1-203ENST00000565844 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
KNOP1-203ENST00000565844 STRCP1A6NGW2 1772 aa22.26■■□□□ 1.15
KNOP1-203ENST00000565844 KIF1BO60333 1816 aa22.26■■□□□ 1.15
KNOP1-203ENST00000565844 UBAP1LF5GYI3 381 aa22.25■■□□□ 1.15
KNOP1-203ENST00000565844 MED14O60244 1454 aa22.23■■□□□ 1.15
KNOP1-203ENST00000565844 MYO5BQ9ULV0 1848 aa22.2■■□□□ 1.14
KNOP1-203ENST00000565844 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
KNOP1-203ENST00000565844 SLC52A1Q9NWF4 448 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms