RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 KANK1Q14678 1352 aa11.51□□□□□ -0.57
CDH1-208ENST00000565810 NUP155O75694 1391 aa11.5□□□□□ -0.57
CDH1-208ENST00000565810 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
CDH1-208ENST00000565810 SLC4A1APQ9BWU0 796 aaKnown RBP11.48□□□□□ -0.57
CDH1-208ENST00000565810 WASHC2CQ9Y4E1 1318 aa11.48□□□□□ -0.57
CDH1-208ENST00000565810 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
CDH1-208ENST00000565810 AGLP35573 1532 aa11.47□□□□□ -0.57
CDH1-208ENST00000565810 MPHOSPH9Q99550 1183 aa11.46□□□□□ -0.57
CDH1-208ENST00000565810 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
CDH1-208ENST00000565810 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
CDH1-208ENST00000565810 PKD2Q13563 968 aa11.42□□□□□ -0.58
CDH1-208ENST00000565810 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
CDH1-208ENST00000565810 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.58
CDH1-208ENST00000565810 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
CDH1-208ENST00000565810 KDM5DQ9BY66 1539 aa11.39□□□□□ -0.59
CDH1-208ENST00000565810 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
CDH1-208ENST00000565810 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
CDH1-208ENST00000565810 UNC13BO14795 1591 aa11.38□□□□□ -0.59
CDH1-208ENST00000565810 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
CDH1-208ENST00000565810 ZMYM3Q14202 1370 aa11.38□□□□□ -0.59
CDH1-208ENST00000565810 PZPP20742 1482 aa11.38□□□□□ -0.59
CDH1-208ENST00000565810 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
CDH1-208ENST00000565810 FOXD1Q16676 465 aa11.37□□□□□ -0.59
CDH1-208ENST00000565810 ABCC3O15438 1527 aa11.36□□□□□ -0.59
CDH1-208ENST00000565810 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
CDH1-208ENST00000565810 DEPDC5O75140 1603 aa11.36□□□□□ -0.59
CDH1-208ENST00000565810 PLPPR3Q6T4P5 718 aa11.36□□□□□ -0.59
CDH1-208ENST00000565810 VWDEQ8N2E2 1590 aa11.35□□□□□ -0.59
CDH1-208ENST00000565810 MROH1Q8NDA8 1641 aa11.35□□□□□ -0.59
CDH1-208ENST00000565810 ARHGAP31Q2M1Z3 1444 aa11.35□□□□□ -0.59
CDH1-208ENST00000565810 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
CDH1-208ENST00000565810 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
CDH1-208ENST00000565810 RPRD2Q5VT52 1461 aaKnown RBP11.33□□□□□ -0.6
CDH1-208ENST00000565810 SIGLEC1Q9BZZ2 1709 aa11.33□□□□□ -0.6
CDH1-208ENST00000565810 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
CDH1-208ENST00000565810 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
CDH1-208ENST00000565810 NPATQ14207 1427 aa11.33□□□□□ -0.6
CDH1-208ENST00000565810 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
CDH1-208ENST00000565810 SLC52A1Q9NWF4 448 aa11.32□□□□□ -0.6
CDH1-208ENST00000565810 ANKRD30BQ9BXX2 1392 aa11.31□□□□□ -0.6
CDH1-208ENST00000565810 ZC3H13Q5T200 1668 aaKnown RBP11.3□□□□□ -0.6
CDH1-208ENST00000565810 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
CDH1-208ENST00000565810 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
CDH1-208ENST00000565810 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
CDH1-208ENST00000565810 TET3O43151 1660 aa11.3□□□□□ -0.6
CDH1-208ENST00000565810 PTPRTO14522 1441 aa11.29□□□□□ -0.6
CDH1-208ENST00000565810 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
CDH1-208ENST00000565810 TNRQ92752 1358 aa11.28□□□□□ -0.6
CDH1-208ENST00000565810 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
CDH1-208ENST00000565810 NOS1P29475 1434 aa11.28□□□□□ -0.6
CDH1-208ENST00000565810 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
CDH1-208ENST00000565810 SIN3AQ96ST3 1273 aa11.28□□□□□ -0.6
CDH1-208ENST00000565810 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
CDH1-208ENST00000565810 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.6
CDH1-208ENST00000565810 ERVK-7P63135 1459 aa11.27□□□□□ -0.6
CDH1-208ENST00000565810 IDI1Q13907 227 aa11.27□□□□□ -0.61
CDH1-208ENST00000565810 CAMSAP1Q5T5Y3 1602 aa11.27□□□□□ -0.61
CDH1-208ENST00000565810 MADDQ8WXG6 1647 aa11.27□□□□□ -0.61
CDH1-208ENST00000565810 CEP152O94986 1710 aa11.26□□□□□ -0.61
CDH1-208ENST00000565810 PTPRMP28827 1452 aa11.26□□□□□ -0.61
CDH1-208ENST00000565810 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
CDH1-208ENST00000565810 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
CDH1-208ENST00000565810 RGL3Q3MIN7 710 aa11.24□□□□□ -0.61
CDH1-208ENST00000565810 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
CDH1-208ENST00000565810 MROH2AA6NES4 1674 aa11.24□□□□□ -0.61
CDH1-208ENST00000565810 E9PCH4 1651 aa11.24□□□□□ -0.61
CDH1-208ENST00000565810 TIMELESSQ9UNS1 1208 aa11.23□□□□□ -0.61
CDH1-208ENST00000565810 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
CDH1-208ENST00000565810 TRPM2O94759 1503 aa11.23□□□□□ -0.61
CDH1-208ENST00000565810 SPATA31D1Q6ZQQ2 1576 aa11.23□□□□□ -0.61
CDH1-208ENST00000565810 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
CDH1-208ENST00000565810 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
CDH1-208ENST00000565810 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
CDH1-208ENST00000565810 NLRP1Q9C000 1473 aa11.21□□□□□ -0.61
CDH1-208ENST00000565810 THEMISQ8N1K5 641 aaPredicted RBP11.21□□□□□ -0.61
CDH1-208ENST00000565810 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
CDH1-208ENST00000565810 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
CDH1-208ENST00000565810 UHRF1BP1Q6BDS2 1440 aa11.19□□□□□ -0.62
CDH1-208ENST00000565810 L3MBTL2Q969R5 705 aa11.19□□□□□ -0.62
CDH1-208ENST00000565810 C3P01024 1663 aa11.19□□□□□ -0.62
CDH1-208ENST00000565810 PREX1Q8TCU6 1659 aa11.18□□□□□ -0.62
CDH1-208ENST00000565810 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDH1-208ENST00000565810 DCAF11Q8TEB1 546 aa11.18□□□□□ -0.62
CDH1-208ENST00000565810 SYNMO15061 1565 aa11.18□□□□□ -0.62
CDH1-208ENST00000565810 SPHKAPQ2M3C7 1700 aa11.18□□□□□ -0.62
CDH1-208ENST00000565810 UGGT1Q9NYU2 1555 aa11.17□□□□□ -0.62
CDH1-208ENST00000565810 VGFO15240 615 aaPredicted RBP11.17□□□□□ -0.62
CDH1-208ENST00000565810 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
CDH1-208ENST00000565810 EID1Q9Y6B2 187 aa11.17□□□□□ -0.62
CDH1-208ENST00000565810 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
CDH1-208ENST00000565810 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
CDH1-208ENST00000565810 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
CDH1-208ENST00000565810 CLTCL1P53675 1640 aa11.16□□□□□ -0.62
CDH1-208ENST00000565810 TXNDC2Q86VQ3 553 aa11.15□□□□□ -0.62
CDH1-208ENST00000565810 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
CDH1-208ENST00000565810 ANKLE2Q86XL3 938 aa11.14□□□□□ -0.63
CDH1-208ENST00000565810 TMEM2Q9UHN6 1383 aa11.14□□□□□ -0.63
CDH1-208ENST00000565810 PIK3C2BO00750 1634 aa11.13□□□□□ -0.63
CDH1-208ENST00000565810 NUTM2DQ5VT03 806 aaPredicted RBP11.13□□□□□ -0.63
CDH1-208ENST00000565810 BCANQ96GW7 911 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms