RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 ARHGEF12Q9NZN5 1544 aa10.33□□□□□ -0.76
TCF4-229ENST00000565580 PREX2Q70Z35 1606 aa10.33□□□□□ -0.76
TCF4-229ENST00000565580 ATP10AO60312 1499 aa10.33□□□□□ -0.76
TCF4-229ENST00000565580 C9orf84Q5VXU9 1444 aa10.33□□□□□ -0.76
TCF4-229ENST00000565580 LMTK3Q96Q04 1460 aa10.32□□□□□ -0.76
TCF4-229ENST00000565580 ABCC1P33527 1531 aa10.32□□□□□ -0.76
TCF4-229ENST00000565580 TRAPPC8Q9Y2L5 1435 aa10.32□□□□□ -0.76
TCF4-229ENST00000565580 CDC42BPAQ5VT25 1732 aa10.31□□□□□ -0.76
TCF4-229ENST00000565580 DIP2CQ9Y2E4 1556 aa10.31□□□□□ -0.76
TCF4-229ENST00000565580 ITSN2Q9NZM3 1697 aa10.3□□□□□ -0.76
TCF4-229ENST00000565580 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
TCF4-229ENST00000565580 FER1L4A9Z1Z3 1794 aa10.29□□□□□ -0.76
TCF4-229ENST00000565580 GPATCH8Q9UKJ3 1502 aaKnown RBP10.29□□□□□ -0.76
TCF4-229ENST00000565580 MYT1LQ9UL68 1186 aa10.29□□□□□ -0.76
TCF4-229ENST00000565580 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
TCF4-229ENST00000565580 SAMD9LQ8IVG5 1584 aa10.28□□□□□ -0.76
TCF4-229ENST00000565580 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
TCF4-229ENST00000565580 ZNF777Q9ULD5 760 aaPredicted RBP10.28□□□□□ -0.76
TCF4-229ENST00000565580 HSPA2P54652 639 aa10.27□□□□□ -0.77
TCF4-229ENST00000565580 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
TCF4-229ENST00000565580 MIER1Q8N108 512 aa10.27□□□□□ -0.77
TCF4-229ENST00000565580 MS4A3Q96HJ5 214 aa10.27□□□□□ -0.77
TCF4-229ENST00000565580 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
TCF4-229ENST00000565580 REREQ9P2R6 1566 aa10.26□□□□□ -0.77
TCF4-229ENST00000565580 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
TCF4-229ENST00000565580 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
TCF4-229ENST00000565580 SYCP2Q9BX26 1530 aa10.26□□□□□ -0.77
TCF4-229ENST00000565580 KIDINS220Q9ULH0 1771 aa10.26□□□□□ -0.77
TCF4-229ENST00000565580 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
TCF4-229ENST00000565580 C7P10643 843 aa10.25□□□□□ -0.77
TCF4-229ENST00000565580 HNRNPMP52272 730 aaKnown RBP eCLIP10.25□□□□□ -0.777e-6■■■□□ 17
TCF4-229ENST00000565580 CCNB3Q8WWL7 1395 aa10.25□□□□□ -0.77
TCF4-229ENST00000565580 AGLP35573 1532 aa10.24□□□□□ -0.77
TCF4-229ENST00000565580 CFDP1Q9UEE9 299 aaPredicted RBP10.24□□□□□ -0.77
TCF4-229ENST00000565580 CCDC61Q9Y6R9 512 aa10.23□□□□□ -0.77
TCF4-229ENST00000565580 KIAA1107Q9UPP5 1409 aa10.23□□□□□ -0.77
TCF4-229ENST00000565580 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
TCF4-229ENST00000565580 TIAM1Q13009 1591 aa10.22□□□□□ -0.77
TCF4-229ENST00000565580 LOC105371045A0A1W2PR82 267 aa10.22□□□□□ -0.77
TCF4-229ENST00000565580 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
TCF4-229ENST00000565580 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
TCF4-229ENST00000565580 SPAG9O60271 1321 aaKnown RBP10.22□□□□□ -0.77
TCF4-229ENST00000565580 ZNF644Q9H582 1327 aaPredicted RBP10.22□□□□□ -0.77
TCF4-229ENST00000565580 OTUD5Q96G74 571 aa10.21□□□□□ -0.77
TCF4-229ENST00000565580 METRNQ9UJH8 293 aa10.21□□□□□ -0.77
TCF4-229ENST00000565580 PLEKHH2Q8IVE3 1493 aa10.21□□□□□ -0.78
TCF4-229ENST00000565580 ATP7AQ04656 1500 aa10.2□□□□□ -0.78
TCF4-229ENST00000565580 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
TCF4-229ENST00000565580 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
TCF4-229ENST00000565580 INO80Q9ULG1 1556 aaPredicted RBP10.2□□□□□ -0.78
TCF4-229ENST00000565580 C3P01024 1663 aa10.19□□□□□ -0.78
TCF4-229ENST00000565580 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
TCF4-229ENST00000565580 MBD5Q9P267 1494 aa10.18□□□□□ -0.78
TCF4-229ENST00000565580 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
TCF4-229ENST00000565580 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
TCF4-229ENST00000565580 KIF12Q96FN5 646 aa10.18□□□□□ -0.78
TCF4-229ENST00000565580 SUPT6HQ7KZ85 1726 aaKnown RBP10.18□□□□□ -0.78
TCF4-229ENST00000565580 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
TCF4-229ENST00000565580 NCOA2Q15596 1464 aa10.17□□□□□ -0.78
TCF4-229ENST00000565580 POTEB2H3BUK9 544 aa10.17□□□□□ -0.78
TCF4-229ENST00000565580 ESF1Q9H501 851 aaKnown RBP10.17□□□□□ -0.78
TCF4-229ENST00000565580 A2MP01023 1474 aa10.17□□□□□ -0.78
TCF4-229ENST00000565580 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
TCF4-229ENST00000565580 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
TCF4-229ENST00000565580 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
TCF4-229ENST00000565580 SETD1BQ9UPS6 1966 aaKnown RBP10.15□□□□□ -0.78
TCF4-229ENST00000565580 STRCQ7RTU9 1775 aa10.14□□□□□ -0.79
TCF4-229ENST00000565580 CAMSAP2Q08AD1 1489 aa10.14□□□□□ -0.79
TCF4-229ENST00000565580 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
TCF4-229ENST00000565580 MROH2AA6NES4 1674 aa10.13□□□□□ -0.79
TCF4-229ENST00000565580 LRRC9Q6ZRR7 1453 aa10.13□□□□□ -0.79
TCF4-229ENST00000565580 TIE1P35590 1138 aa10.13□□□□□ -0.79
TCF4-229ENST00000565580 KANK4Q5T7N3 995 aaPredicted RBP10.13□□□□□ -0.79
TCF4-229ENST00000565580 GGT6Q6P531 493 aa10.13□□□□□ -0.79
TCF4-229ENST00000565580 RTEL1-TNFRSF6BF6WH68 1400 aa10.13□□□□□ -0.79
TCF4-229ENST00000565580 CLTCQ00610 1675 aaKnown RBP10.12□□□□□ -0.79
TCF4-229ENST00000565580 ADGBQ8N7X0 1667 aa10.12□□□□□ -0.79
TCF4-229ENST00000565580 CCDC141Q6ZP82 1450 aa10.12□□□□□ -0.79
TCF4-229ENST00000565580 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
TCF4-229ENST00000565580 NPATQ14207 1427 aa10.11□□□□□ -0.79
TCF4-229ENST00000565580 ATN1P54259 1190 aaPredicted RBP10.11□□□□□ -0.79
TCF4-229ENST00000565580 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
TCF4-229ENST00000565580 DHX29Q7Z478 1369 aaKnown RBP10.11□□□□□ -0.79
TCF4-229ENST00000565580 PTPRKQ15262 1439 aa10.1□□□□□ -0.79
TCF4-229ENST00000565580 MAP3K13O43283 966 aa10.1□□□□□ -0.79
TCF4-229ENST00000565580 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
TCF4-229ENST00000565580 SCUBE2Q9NQ36 999 aa10.1□□□□□ -0.79
TCF4-229ENST00000565580 NCOA1Q15788 1441 aa10.09□□□□□ -0.79
TCF4-229ENST00000565580 MAP3K1Q13233 1512 aa10.09□□□□□ -0.79
TCF4-229ENST00000565580 ARHGEF5Q12774 1597 aa10.09□□□□□ -0.79
TCF4-229ENST00000565580 KIF3BO15066 747 aa10.08□□□□□ -0.8
TCF4-229ENST00000565580 BMP2KQ9NSY1 1161 aaPredicted RBP10.08□□□□□ -0.8
TCF4-229ENST00000565580 PTPRTO14522 1441 aa10.07□□□□□ -0.8
TCF4-229ENST00000565580 MYO3AQ8NEV4 1616 aa10.07□□□□□ -0.8
TCF4-229ENST00000565580 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
TCF4-229ENST00000565580 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
TCF4-229ENST00000565580 MYOM3Q5VTT5 1437 aa10.07□□□□□ -0.8
TCF4-229ENST00000565580 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
TCF4-229ENST00000565580 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
TCF4-229ENST00000565580 MIA2Q96PC5 1412 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms