RNA–Protein interactions for RNA: ENST00000565124.4

TCF4-227, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-227ENST00000565124 C9orf84Q5VXU9 1444 aa11.45□□□□□ -0.58
TCF4-227ENST00000565124 MIER1Q8N108 512 aa11.45□□□□□ -0.58
TCF4-227ENST00000565124 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
TCF4-227ENST00000565124 EFCAB2Q5VUJ9 269 aa11.44□□□□□ -0.58
TCF4-227ENST00000565124 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
TCF4-227ENST00000565124 CD109Q6YHK3 1445 aa11.43□□□□□ -0.58
TCF4-227ENST00000565124 HRCP23327 699 aa11.42□□□□□ -0.58
TCF4-227ENST00000565124 ADGRL1O94910 1474 aa11.42□□□□□ -0.58
TCF4-227ENST00000565124 ANKRD30AQ9BXX3 1397 aa11.41□□□□□ -0.58
TCF4-227ENST00000565124 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
TCF4-227ENST00000565124 TSPOAP1O95153 1857 aa11.41□□□□□ -0.58
TCF4-227ENST00000565124 PPRC1Q5VV67 1664 aaKnown RBP11.41□□□□□ -0.58
TCF4-227ENST00000565124 NEO1Q92859 1461 aa11.41□□□□□ -0.58
TCF4-227ENST00000565124 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
TCF4-227ENST00000565124 CCER1Q8TC90 406 aaPredicted RBP11.41□□□□□ -0.58
TCF4-227ENST00000565124 KDM6BO15054 1643 aa11.41□□□□□ -0.58
TCF4-227ENST00000565124 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
TCF4-227ENST00000565124 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
TCF4-227ENST00000565124 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.58
TCF4-227ENST00000565124 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
TCF4-227ENST00000565124 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
TCF4-227ENST00000565124 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
TCF4-227ENST00000565124 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
TCF4-227ENST00000565124 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
TCF4-227ENST00000565124 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
TCF4-227ENST00000565124 RICTORQ6R327 1708 aa11.38□□□□□ -0.59
TCF4-227ENST00000565124 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
TCF4-227ENST00000565124 KDM5CP41229 1560 aa11.37□□□□□ -0.59
TCF4-227ENST00000565124 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
TCF4-227ENST00000565124 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
TCF4-227ENST00000565124 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
TCF4-227ENST00000565124 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
TCF4-227ENST00000565124 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
TCF4-227ENST00000565124 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
TCF4-227ENST00000565124 KIF15Q9NS87 1388 aa11.36□□□□□ -0.59
TCF4-227ENST00000565124 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
TCF4-227ENST00000565124 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
TCF4-227ENST00000565124 RTEL1-TNFRSF6BF6WH68 1400 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 UNC13BO14795 1591 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 KIDINS220Q9ULH0 1771 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 KDM5DQ9BY66 1539 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
TCF4-227ENST00000565124 EIF2AK4Q9P2K8 1649 aaKnown RBP11.33□□□□□ -0.6
TCF4-227ENST00000565124 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
TCF4-227ENST00000565124 FAM69CQ0P6D2 419 aa11.32□□□□□ -0.6
TCF4-227ENST00000565124 FRMPD1Q5SYB0 1578 aa11.32□□□□□ -0.6
TCF4-227ENST00000565124 SPAG9O60271 1321 aaKnown RBP11.32□□□□□ -0.6
TCF4-227ENST00000565124 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
TCF4-227ENST00000565124 ZMYM4Q5VZL5 1548 aa11.31□□□□□ -0.6
TCF4-227ENST00000565124 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
TCF4-227ENST00000565124 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
TCF4-227ENST00000565124 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
TCF4-227ENST00000565124 DEPDC5O75140 1603 aa11.3□□□□□ -0.6
TCF4-227ENST00000565124 MAGI2Q86UL8 1455 aa11.3□□□□□ -0.6
TCF4-227ENST00000565124 MLH3Q9UHC1 1453 aa11.3□□□□□ -0.6
TCF4-227ENST00000565124 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
TCF4-227ENST00000565124 IQGAP3Q86VI3 1631 aa11.29□□□□□ -0.6
TCF4-227ENST00000565124 PZPP20742 1482 aa11.28□□□□□ -0.6
TCF4-227ENST00000565124 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
TCF4-227ENST00000565124 RGL2O15211 777 aa11.27□□□□□ -0.61
TCF4-227ENST00000565124 AFAP1Q8N556 730 aa11.27□□□□□ -0.61
TCF4-227ENST00000565124 RNF17Q9BXT8 1623 aaKnown RBP11.27□□□□□ -0.61
TCF4-227ENST00000565124 TRIM52Q96A61 297 aa11.25□□□□□ -0.61
TCF4-227ENST00000565124 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
TCF4-227ENST00000565124 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
TCF4-227ENST00000565124 A2MP01023 1474 aa11.24□□□□□ -0.61
TCF4-227ENST00000565124 MROH1Q8NDA8 1641 aa11.24□□□□□ -0.61
TCF4-227ENST00000565124 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
TCF4-227ENST00000565124 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
TCF4-227ENST00000565124 TET3O43151 1660 aa11.23□□□□□ -0.61
TCF4-227ENST00000565124 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
TCF4-227ENST00000565124 VWDEQ8N2E2 1590 aa11.22□□□□□ -0.61
TCF4-227ENST00000565124 REREQ9P2R6 1566 aa11.22□□□□□ -0.61
TCF4-227ENST00000565124 NUP155O75694 1391 aa11.21□□□□□ -0.61
TCF4-227ENST00000565124 MPHOSPH9Q99550 1183 aa11.21□□□□□ -0.61
TCF4-227ENST00000565124 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
TCF4-227ENST00000565124 CEP152O94986 1710 aa11.21□□□□□ -0.62
TCF4-227ENST00000565124 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
TCF4-227ENST00000565124 ZC3H13Q5T200 1668 aaKnown RBP11.2□□□□□ -0.62
TCF4-227ENST00000565124 SPHKAPQ2M3C7 1700 aa11.18□□□□□ -0.62
TCF4-227ENST00000565124 E9PCH4 1651 aa11.18□□□□□ -0.62
TCF4-227ENST00000565124 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
TCF4-227ENST00000565124 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
TCF4-227ENST00000565124 BBXQ8WY36 941 aaPredicted RBP11.18□□□□□ -0.62
TCF4-227ENST00000565124 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
TCF4-227ENST00000565124 YEATS2Q9ULM3 1422 aa11.18□□□□□ -0.62
TCF4-227ENST00000565124 ANKRD30BQ9BXX2 1392 aa11.17□□□□□ -0.62
TCF4-227ENST00000565124 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
TCF4-227ENST00000565124 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
TCF4-227ENST00000565124 KANK1Q14678 1352 aa11.16□□□□□ -0.62
TCF4-227ENST00000565124 EFCAB6Q5THR3 1501 aa11.16□□□□□ -0.62
TCF4-227ENST00000565124 RPRD2Q5VT52 1461 aaKnown RBP11.16□□□□□ -0.62
TCF4-227ENST00000565124 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
TCF4-227ENST00000565124 AGLP35573 1532 aa11.15□□□□□ -0.62
TCF4-227ENST00000565124 ATP10AO60312 1499 aa11.15□□□□□ -0.62
TCF4-227ENST00000565124 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.62
TCF4-227ENST00000565124 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms