RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 DNMT1P26358 1616 aaKnown RBP15.24■□□□□ 0.03
CDH1-206ENST00000564676 ZMYM3Q14202 1370 aa15.22■□□□□ 0.03
CDH1-206ENST00000564676 ANKRD30AQ9BXX3 1397 aa15.22■□□□□ 0.03
CDH1-206ENST00000564676 KIF15Q9NS87 1388 aa15.22■□□□□ 0.03
CDH1-206ENST00000564676 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
CDH1-206ENST00000564676 SETD1BQ9UPS6 1966 aaKnown RBP15.2■□□□□ 0.02
CDH1-206ENST00000564676 WASHC2CQ9Y4E1 1318 aa15.19■□□□□ 0.02
CDH1-206ENST00000564676 DUOX2Q9NRD8 1548 aa15.19■□□□□ 0.02
CDH1-206ENST00000564676 ITGAEP38570 1179 aa15.19■□□□□ 0.02
CDH1-206ENST00000564676 C3P01024 1663 aa15.19■□□□□ 0.02
CDH1-206ENST00000564676 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
CDH1-206ENST00000564676 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
CDH1-206ENST00000564676 HSPA2P54652 639 aa15.16■□□□□ 0.02
CDH1-206ENST00000564676 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
CDH1-206ENST00000564676 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
CDH1-206ENST00000564676 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
CDH1-206ENST00000564676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDH1-206ENST00000564676 ERBINQ96RT1 1412 aa15.15■□□□□ 0.02
CDH1-206ENST00000564676 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
CDH1-206ENST00000564676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDH1-206ENST00000564676 UHRF1BP1Q6BDS2 1440 aa15.14■□□□□ 0.01
CDH1-206ENST00000564676 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
CDH1-206ENST00000564676 KDM5DQ9BY66 1539 aa15.13■□□□□ 0.01
CDH1-206ENST00000564676 PTPRKQ15262 1439 aa15.13■□□□□ 0.01
CDH1-206ENST00000564676 NPATQ14207 1427 aa15.12■□□□□ 0.01
CDH1-206ENST00000564676 RNF17Q9BXT8 1623 aaKnown RBP15.12■□□□□ 0.01
CDH1-206ENST00000564676 FAM135AQ9P2D6 1515 aa15.12■□□□□ 0.01
CDH1-206ENST00000564676 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
CDH1-206ENST00000564676 PREX1Q8TCU6 1659 aa15.11■□□□□ 0.01
CDH1-206ENST00000564676 FBXO31Q5XUX0 539 aaPredicted RBP15.1■□□□□ 0.01
CDH1-206ENST00000564676 KANK1Q14678 1352 aa15.1■□□□□ 0.01
CDH1-206ENST00000564676 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
CDH1-206ENST00000564676 ROCK1Q13464 1354 aa15.09■□□□□ 0.01
CDH1-206ENST00000564676 ABCC3O15438 1527 aa15.08■□□□□ 0.01
CDH1-206ENST00000564676 MROH1Q8NDA8 1641 aa15.07■□□□□ 0
CDH1-206ENST00000564676 PZPP20742 1482 aa15.07■□□□□ 0
CDH1-206ENST00000564676 TNRQ92752 1358 aa15.06■□□□□ 0
CDH1-206ENST00000564676 ZC3H13Q5T200 1668 aaKnown RBP15.06■□□□□ 0
CDH1-206ENST00000564676 CEP152O94986 1710 aa15.05■□□□□ -0
CDH1-206ENST00000564676 CFAP65Q6ZU64 1925 aaKnown RBP15.04■□□□□ -0
CDH1-206ENST00000564676 PRDM15P57071 1507 aaPredicted RBP15.04■□□□□ -0
CDH1-206ENST00000564676 DEPDC5O75140 1603 aa15.03■□□□□ -0
CDH1-206ENST00000564676 CAMSAP1Q5T5Y3 1602 aa15.01□□□□□ -0.01
CDH1-206ENST00000564676 MYO3AQ8NEV4 1616 aa15.01□□□□□ -0.01
CDH1-206ENST00000564676 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
CDH1-206ENST00000564676 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
CDH1-206ENST00000564676 A2ML1A8K2U0 1454 aa14.99□□□□□ -0.01
CDH1-206ENST00000564676 ERVK-7P63135 1459 aa14.99□□□□□ -0.01
CDH1-206ENST00000564676 VWDEQ8N2E2 1590 aa14.98□□□□□ -0.01
CDH1-206ENST00000564676 LMTK2Q8IWU2 1503 aa14.97□□□□□ -0.01
CDH1-206ENST00000564676 NLRP1Q9C000 1473 aa14.97□□□□□ -0.01
CDH1-206ENST00000564676 SPATA31D1Q6ZQQ2 1576 aa14.97□□□□□ -0.01
CDH1-206ENST00000564676 NUP155O75694 1391 aa14.97□□□□□ -0.01
CDH1-206ENST00000564676 THEMISQ8N1K5 641 aaPredicted RBP14.96□□□□□ -0.01
CDH1-206ENST00000564676 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
CDH1-206ENST00000564676 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
CDH1-206ENST00000564676 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
CDH1-206ENST00000564676 UNC13BO14795 1591 aa14.94□□□□□ -0.02
CDH1-206ENST00000564676 NAIPQ13075 1403 aa14.94□□□□□ -0.02
CDH1-206ENST00000564676 PKD2Q13563 968 aa14.94□□□□□ -0.02
CDH1-206ENST00000564676 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
CDH1-206ENST00000564676 EFCAB6Q5THR3 1501 aa14.92□□□□□ -0.02
CDH1-206ENST00000564676 TRIM52Q96A61 297 aa14.92□□□□□ -0.02
CDH1-206ENST00000564676 PLA2R1Q13018 1463 aa14.92□□□□□ -0.02
CDH1-206ENST00000564676 UGGT1Q9NYU2 1555 aa14.92□□□□□ -0.02
CDH1-206ENST00000564676 HFM1A2PYH4 1435 aa14.92□□□□□ -0.02
CDH1-206ENST00000564676 TET3O43151 1660 aa14.91□□□□□ -0.02
CDH1-206ENST00000564676 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
CDH1-206ENST00000564676 PTPRTO14522 1441 aa14.91□□□□□ -0.02
CDH1-206ENST00000564676 RPRD2Q5VT52 1461 aaKnown RBP14.9□□□□□ -0.02
CDH1-206ENST00000564676 IDI1Q13907 227 aa14.9□□□□□ -0.02
CDH1-206ENST00000564676 GCC2Q8IWJ2 1684 aa14.9□□□□□ -0.02
CDH1-206ENST00000564676 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
CDH1-206ENST00000564676 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
CDH1-206ENST00000564676 NOS1P29475 1434 aa14.89□□□□□ -0.03
CDH1-206ENST00000564676 E9PCH4 1651 aa14.85□□□□□ -0.03
CDH1-206ENST00000564676 SYNMO15061 1565 aa14.85□□□□□ -0.03
CDH1-206ENST00000564676 UBR1Q8IWV7 1749 aa14.84□□□□□ -0.03
CDH1-206ENST00000564676 CHGAP10645 457 aaKnown RBP14.84□□□□□ -0.03
CDH1-206ENST00000564676 TXNDC2Q86VQ3 553 aa14.84□□□□□ -0.03
CDH1-206ENST00000564676 EID1Q9Y6B2 187 aa14.84□□□□□ -0.03
CDH1-206ENST00000564676 PIK3C2BO00750 1634 aa14.84□□□□□ -0.03
CDH1-206ENST00000564676 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.04
CDH1-206ENST00000564676 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CDH1-206ENST00000564676 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
CDH1-206ENST00000564676 POLR1AO95602 1720 aaPredicted RBP14.82□□□□□ -0.04
CDH1-206ENST00000564676 CERKQ8TCT0 537 aa14.81□□□□□ -0.04
CDH1-206ENST00000564676 TMEM2Q9UHN6 1383 aa14.81□□□□□ -0.04
CDH1-206ENST00000564676 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
CDH1-206ENST00000564676 SETD5Q9C0A6 1442 aa14.81□□□□□ -0.04
CDH1-206ENST00000564676 LTKP29376 864 aa14.8□□□□□ -0.04
CDH1-206ENST00000564676 ADGRB3O60242 1522 aa14.79□□□□□ -0.04
CDH1-206ENST00000564676 SLIT1O75093 1534 aa14.79□□□□□ -0.04
CDH1-206ENST00000564676 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
CDH1-206ENST00000564676 SCAF11Q99590 1463 aaKnown RBP14.79□□□□□ -0.04
CDH1-206ENST00000564676 ZNF335Q9H4Z2 1342 aaPredicted RBP14.79□□□□□ -0.04
CDH1-206ENST00000564676 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
CDH1-206ENST00000564676 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
CDH1-206ENST00000564676 MED14O60244 1454 aa14.78□□□□□ -0.04
CDH1-206ENST00000564676 ACIN1Q9UKV3 1341 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms