RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
HERC2-205ENST00000564383 HECW1Q76N89 1606 aa10.4□□□□□ -0.75
HERC2-205ENST00000564383 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
HERC2-205ENST00000564383 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
HERC2-205ENST00000564383 PTPRGP23470 1445 aa10.38□□□□□ -0.75
HERC2-205ENST00000564383 ABCA8O94911 1581 aa10.38□□□□□ -0.75
HERC2-205ENST00000564383 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
HERC2-205ENST00000564383 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
HERC2-205ENST00000564383 MTUS2Q5JR59 1369 aa10.37□□□□□ -0.75
HERC2-205ENST00000564383 CCNB3Q8WWL7 1395 aa10.37□□□□□ -0.75
HERC2-205ENST00000564383 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
HERC2-205ENST00000564383 EHBP1L1Q8N3D4 1523 aa10.35□□□□□ -0.75
HERC2-205ENST00000564383 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
HERC2-205ENST00000564383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.757e-7■■■■■ 34.2
HERC2-205ENST00000564383 NCOA2Q15596 1464 aa10.35□□□□□ -0.75
HERC2-205ENST00000564383 HRCP23327 699 aa10.34□□□□□ -0.75
HERC2-205ENST00000564383 ATP10BO94823 1461 aa10.33□□□□□ -0.76
HERC2-205ENST00000564383 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
HERC2-205ENST00000564383 FGD6Q6ZV73 1430 aa10.31□□□□□ -0.76
HERC2-205ENST00000564383 ILDR1Q86SU0 546 aaPredicted RBP10.3□□□□□ -0.76
HERC2-205ENST00000564383 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
HERC2-205ENST00000564383 MYOM3Q5VTT5 1437 aa10.3□□□□□ -0.76
HERC2-205ENST00000564383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERC2-205ENST00000564383 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
HERC2-205ENST00000564383 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
HERC2-205ENST00000564383 SUPT6HQ7KZ85 1726 aaKnown RBP10.27□□□□□ -0.76
HERC2-205ENST00000564383 PSEN1P49768 467 aa10.27□□□□□ -0.77
HERC2-205ENST00000564383 FAM50AQ14320 339 aaKnown RBP10.27□□□□□ -0.77
HERC2-205ENST00000564383 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
HERC2-205ENST00000564383 UHRF1BP1LA0JNW5 1464 aa10.27□□□□□ -0.77
HERC2-205ENST00000564383 HOXB1P14653 301 aaPredicted RBP10.25□□□□□ -0.77
HERC2-205ENST00000564383 GSE1Q14687 1217 aa10.25□□□□□ -0.77
HERC2-205ENST00000564383 DPY19L2Q6NUT2 758 aa10.25□□□□□ -0.77
HERC2-205ENST00000564383 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
HERC2-205ENST00000564383 PTPRKQ15262 1439 aa10.24□□□□□ -0.77
HERC2-205ENST00000564383 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
HERC2-205ENST00000564383 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
HERC2-205ENST00000564383 PLEKHD1A6NEE1 506 aa10.24□□□□□ -0.77
HERC2-205ENST00000564383 ITGAEP38570 1179 aa10.24□□□□□ -0.77
HERC2-205ENST00000564383 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
HERC2-205ENST00000564383 KDM5BQ9UGL1 1544 aa10.23□□□□□ -0.77
HERC2-205ENST00000564383 KIF14Q15058 1648 aa10.23□□□□□ -0.77
HERC2-205ENST00000564383 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
HERC2-205ENST00000564383 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
HERC2-205ENST00000564383 FKBP8Q14318 412 aa10.22□□□□□ -0.77
HERC2-205ENST00000564383 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
HERC2-205ENST00000564383 ADCY10Q96PN6 1610 aa10.22□□□□□ -0.77
HERC2-205ENST00000564383 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
HERC2-205ENST00000564383 ERBB3P21860 1342 aa10.21□□□□□ -0.78
HERC2-205ENST00000564383 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
HERC2-205ENST00000564383 PTPN23Q9H3S7 1636 aa10.21□□□□□ -0.78
HERC2-205ENST00000564383 G3V3G9 751 aa10.2□□□□□ -0.78
HERC2-205ENST00000564383 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
HERC2-205ENST00000564383 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
HERC2-205ENST00000564383 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
HERC2-205ENST00000564383 PDAP1Q13442 181 aaKnown RBP10.17□□□□□ -0.78
HERC2-205ENST00000564383 CFDP1Q9UEE9 299 aaPredicted RBP10.17□□□□□ -0.78
HERC2-205ENST00000564383 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
HERC2-205ENST00000564383 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
HERC2-205ENST00000564383 ABCC5O15440 1437 aa10.16□□□□□ -0.78
HERC2-205ENST00000564383 SETD5Q9C0A6 1442 aa10.16□□□□□ -0.78
HERC2-205ENST00000564383 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
HERC2-205ENST00000564383 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
HERC2-205ENST00000564383 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
HERC2-205ENST00000564383 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
HERC2-205ENST00000564383 CAMSAP2Q08AD1 1489 aa10.15□□□□□ -0.78
HERC2-205ENST00000564383 HFM1A2PYH4 1435 aa10.15□□□□□ -0.79
HERC2-205ENST00000564383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.14□□□□□ -0.79
HERC2-205ENST00000564383 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
HERC2-205ENST00000564383 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
HERC2-205ENST00000564383 DAPK1P53355 1430 aa10.14□□□□□ -0.79
HERC2-205ENST00000564383 NAIPQ13075 1403 aa10.14□□□□□ -0.79
HERC2-205ENST00000564383 TTC37Q6PGP7 1564 aa10.13□□□□□ -0.79
HERC2-205ENST00000564383 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
HERC2-205ENST00000564383 RIMBP2O15034 1052 aa10.12□□□□□ -0.79
HERC2-205ENST00000564383 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
HERC2-205ENST00000564383 AKNAQ7Z591 1439 aa10.12□□□□□ -0.79
HERC2-205ENST00000564383 ASXL2Q76L83 1435 aa10.11□□□□□ -0.79
HERC2-205ENST00000564383 CHIC2Q9UKJ5 165 aa10.11□□□□□ -0.79
HERC2-205ENST00000564383 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
HERC2-205ENST00000564383 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
HERC2-205ENST00000564383 DNMT1P26358 1616 aaKnown RBP10.11□□□□□ -0.79
HERC2-205ENST00000564383 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
HERC2-205ENST00000564383 CDC42BPAQ5VT25 1732 aa10.1□□□□□ -0.79
HERC2-205ENST00000564383 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
HERC2-205ENST00000564383 ROCK1Q13464 1354 aa10.1□□□□□ -0.79
HERC2-205ENST00000564383 PLCH2O75038 1416 aa10.09□□□□□ -0.79
HERC2-205ENST00000564383 PREX2Q70Z35 1606 aa10.09□□□□□ -0.79
HERC2-205ENST00000564383 VASPP50552 380 aaPredicted RBP10.08□□□□□ -0.8
HERC2-205ENST00000564383 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
HERC2-205ENST00000564383 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
HERC2-205ENST00000564383 RIMBP3CA6NJZ7 1639 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 RIMBP3BA6NNM3 1639 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 RIMBP3Q9UFD9 1639 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.81e-6■□□□□ 9.5
HERC2-205ENST00000564383 CYB5RLQ6IPT4 315 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 NCOA1Q15788 1441 aa10.07□□□□□ -0.8
HERC2-205ENST00000564383 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms