RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
RNF40-206ENST00000564260 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
RNF40-206ENST00000564260 GGT6Q6P531 493 aa25.26■■□□□ 1.63
RNF40-206ENST00000564260 KDM5DQ9BY66 1539 aa25.25■■□□□ 1.63
RNF40-206ENST00000564260 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
RNF40-206ENST00000564260 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
RNF40-206ENST00000564260 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
RNF40-206ENST00000564260 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
RNF40-206ENST00000564260 ITGAEP38570 1179 aa25.22■■□□□ 1.63
RNF40-206ENST00000564260 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
RNF40-206ENST00000564260 HFM1A2PYH4 1435 aa25.2■■□□□ 1.63
RNF40-206ENST00000564260 KANK1Q14678 1352 aa25.19■■□□□ 1.62
RNF40-206ENST00000564260 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
RNF40-206ENST00000564260 MROH1Q8NDA8 1641 aa25.19■■□□□ 1.62
RNF40-206ENST00000564260 ACIN1Q9UKV3 1341 aaKnown RBP25.18■■□□□ 1.62
RNF40-206ENST00000564260 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
RNF40-206ENST00000564260 NAIPQ13075 1403 aa25.16■■□□□ 1.62
RNF40-206ENST00000564260 NPATQ14207 1427 aa25.16■■□□□ 1.62
RNF40-206ENST00000564260 ABCC3O15438 1527 aa25.15■■□□□ 1.62
RNF40-206ENST00000564260 LMTK2Q8IWU2 1503 aa25.15■■□□□ 1.62
RNF40-206ENST00000564260 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.62
RNF40-206ENST00000564260 CLTCQ00610 1675 aaKnown RBP25.13■■□□□ 1.61
RNF40-206ENST00000564260 GCC2Q8IWJ2 1684 aa25.13■■□□□ 1.61
RNF40-206ENST00000564260 UNC13BO14795 1591 aa25.12■■□□□ 1.61
RNF40-206ENST00000564260 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
RNF40-206ENST00000564260 PZPP20742 1482 aa25.11■■□□□ 1.61
RNF40-206ENST00000564260 C3P01024 1663 aa25.1■■□□□ 1.61
RNF40-206ENST00000564260 RPRD2Q5VT52 1461 aaKnown RBP25.03■■□□□ 1.6
RNF40-206ENST00000564260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.03■■□□□ 1.61e-6■■■□□ 16.7
RNF40-206ENST00000564260 SETD1BQ9UPS6 1966 aaKnown RBP25.03■■□□□ 1.6
RNF40-206ENST00000564260 CAMSAP1Q5T5Y3 1602 aa25.02■■□□□ 1.6
RNF40-206ENST00000564260 CEBPAP49715 358 aaPredicted RBP25.02■■□□□ 1.6
RNF40-206ENST00000564260 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
RNF40-206ENST00000564260 EFCAB6Q5THR3 1501 aa25.01■■□□□ 1.59
RNF40-206ENST00000564260 NUP155O75694 1391 aa25■■□□□ 1.59
RNF40-206ENST00000564260 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
RNF40-206ENST00000564260 CEP152O94986 1710 aa24.98■■□□□ 1.59
RNF40-206ENST00000564260 PREX1Q8TCU6 1659 aa24.98■■□□□ 1.59
RNF40-206ENST00000564260 SPATA31D1Q6ZQQ2 1576 aa24.98■■□□□ 1.59
RNF40-206ENST00000564260 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
RNF40-206ENST00000564260 TET3O43151 1660 aa24.97■■□□□ 1.59
RNF40-206ENST00000564260 HRCP23327 699 aa24.97■■□□□ 1.59
RNF40-206ENST00000564260 ERVK-7P63135 1459 aa24.96■■□□□ 1.59
RNF40-206ENST00000564260 TNRQ92752 1358 aa24.95■■□□□ 1.59
RNF40-206ENST00000564260 LMTK3Q96Q04 1460 aa24.95■■□□□ 1.58
RNF40-206ENST00000564260 NLRP1Q9C000 1473 aa24.95■■□□□ 1.58
RNF40-206ENST00000564260 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
RNF40-206ENST00000564260 NOS1P29475 1434 aa24.89■■□□□ 1.58
RNF40-206ENST00000564260 MYO3AQ8NEV4 1616 aa24.88■■□□□ 1.57
RNF40-206ENST00000564260 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
RNF40-206ENST00000564260 A2ML1A8K2U0 1454 aa24.88■■□□□ 1.57
RNF40-206ENST00000564260 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
RNF40-206ENST00000564260 TRIM26Q12899 539 aaPredicted RBP24.87■■□□□ 1.57
RNF40-206ENST00000564260 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
RNF40-206ENST00000564260 CEP170BQ9Y4F5 1589 aaPredicted RBP24.85■■□□□ 1.57
RNF40-206ENST00000564260 RAB3GAP2Q9H2M9 1393 aa24.85■■□□□ 1.57
RNF40-206ENST00000564260 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
RNF40-206ENST00000564260 E9PCH4 1651 aa24.81■■□□□ 1.56
RNF40-206ENST00000564260 PLA2R1Q13018 1463 aa24.8■■□□□ 1.56
RNF40-206ENST00000564260 PTPRTO14522 1441 aa24.79■■□□□ 1.56
RNF40-206ENST00000564260 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
RNF40-206ENST00000564260 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
RNF40-206ENST00000564260 THEMISQ8N1K5 641 aaPredicted RBP24.77■■□□□ 1.56
RNF40-206ENST00000564260 SYNMO15061 1565 aa24.76■■□□□ 1.55
RNF40-206ENST00000564260 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
RNF40-206ENST00000564260 PKD2Q13563 968 aa24.73■■□□□ 1.55
RNF40-206ENST00000564260 MPHOSPH9Q99550 1183 aa24.73■■□□□ 1.55
RNF40-206ENST00000564260 PIK3C2BO00750 1634 aa24.72■■□□□ 1.55
RNF40-206ENST00000564260 TRPM2O94759 1503 aa24.71■■□□□ 1.55
RNF40-206ENST00000564260 IDI1Q13907 227 aa24.71■■□□□ 1.55
RNF40-206ENST00000564260 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
RNF40-206ENST00000564260 HSPA2P54652 639 aa24.69■■□□□ 1.54
RNF40-206ENST00000564260 SPHKAPQ2M3C7 1700 aa24.69■■□□□ 1.54
RNF40-206ENST00000564260 ADGRB3O60242 1522 aa24.68■■□□□ 1.54
RNF40-206ENST00000564260 UBR1Q8IWV7 1749 aa24.66■■□□□ 1.54
RNF40-206ENST00000564260 SLIT1O75093 1534 aa24.66■■□□□ 1.54
RNF40-206ENST00000564260 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
RNF40-206ENST00000564260 STAG3Q9UJ98 1225 aa24.65■■□□□ 1.54
RNF40-206ENST00000564260 ARHGAP23Q9P227 1491 aa24.64■■□□□ 1.54
RNF40-206ENST00000564260 ANKLE2Q86XL3 938 aa24.62■■□□□ 1.53
RNF40-206ENST00000564260 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
RNF40-206ENST00000564260 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
RNF40-206ENST00000564260 MED14O60244 1454 aa24.59■■□□□ 1.53
RNF40-206ENST00000564260 TMEM131LA2VDJ0 1609 aa24.59■■□□□ 1.53
RNF40-206ENST00000564260 EID1Q9Y6B2 187 aa24.58■■□□□ 1.53
RNF40-206ENST00000564260 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
RNF40-206ENST00000564260 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
RNF40-206ENST00000564260 NEURL4Q96JN8 1562 aa24.57■■□□□ 1.52
RNF40-206ENST00000564260 SCAF11Q99590 1463 aaKnown RBP24.56■■□□□ 1.52
RNF40-206ENST00000564260 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
RNF40-206ENST00000564260 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.54■■□□□ 1.52
RNF40-206ENST00000564260 POLR1AO95602 1720 aaPredicted RBP24.53■■□□□ 1.52
RNF40-206ENST00000564260 ZFYVE9O95405 1425 aa24.52■■□□□ 1.52
RNF40-206ENST00000564260 ANKRD30BQ9BXX2 1392 aa24.52■■□□□ 1.52
RNF40-206ENST00000564260 FOXD1Q16676 465 aa24.5■■□□□ 1.51
RNF40-206ENST00000564260 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
RNF40-206ENST00000564260 RPGRIP1LQ68CZ1 1315 aa24.5■■□□□ 1.51
RNF40-206ENST00000564260 NCKAP5LQ9HCH0 1330 aa24.5■■□□□ 1.51
RNF40-206ENST00000564260 NPHP4O75161 1426 aaPredicted RBP24.49■■□□□ 1.51
RNF40-206ENST00000564260 RIMS2Q9UQ26 1411 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms