RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
SCAMP2-203ENST00000563663 HRCP23327 699 aa22.5■■□□□ 1.19
SCAMP2-203ENST00000563663 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
SCAMP2-203ENST00000563663 C3P01024 1663 aa22.49■■□□□ 1.19
SCAMP2-203ENST00000563663 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
SCAMP2-203ENST00000563663 KIF3BO15066 747 aa22.48■■□□□ 1.19
SCAMP2-203ENST00000563663 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
SCAMP2-203ENST00000563663 KDM5DQ9BY66 1539 aa22.45■■□□□ 1.19
SCAMP2-203ENST00000563663 CNTLNQ9NXG0 1405 aa22.45■■□□□ 1.18
SCAMP2-203ENST00000563663 ANKRD50Q9ULJ7 1429 aa22.45■■□□□ 1.18
SCAMP2-203ENST00000563663 VWDEQ8N2E2 1590 aa22.45■■□□□ 1.18
SCAMP2-203ENST00000563663 GCC2Q8IWJ2 1684 aa22.43■■□□□ 1.18
SCAMP2-203ENST00000563663 ITGAEP38570 1179 aa22.43■■□□□ 1.18
SCAMP2-203ENST00000563663 GGT6Q6P531 493 aa22.43■■□□□ 1.18
SCAMP2-203ENST00000563663 ABCC3O15438 1527 aa22.43■■□□□ 1.18
SCAMP2-203ENST00000563663 ZC3H13Q5T200 1668 aaKnown RBP22.43■■□□□ 1.18
SCAMP2-203ENST00000563663 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
SCAMP2-203ENST00000563663 CEP152O94986 1710 aa22.42■■□□□ 1.18
SCAMP2-203ENST00000563663 UNC13BO14795 1591 aa22.4■■□□□ 1.18
SCAMP2-203ENST00000563663 NAIPQ13075 1403 aa22.4■■□□□ 1.18
SCAMP2-203ENST00000563663 ZMYM3Q14202 1370 aa22.37■■□□□ 1.17
SCAMP2-203ENST00000563663 HFM1A2PYH4 1435 aa22.37■■□□□ 1.17
SCAMP2-203ENST00000563663 CEBPAP49715 358 aaPredicted RBP22.37■■□□□ 1.17
SCAMP2-203ENST00000563663 CAMSAP1Q5T5Y3 1602 aa22.36■■□□□ 1.17
SCAMP2-203ENST00000563663 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
SCAMP2-203ENST00000563663 LMTK2Q8IWU2 1503 aa22.35■■□□□ 1.17
SCAMP2-203ENST00000563663 PZPP20742 1482 aa22.33■■□□□ 1.17
SCAMP2-203ENST00000563663 SETD1BQ9UPS6 1966 aaKnown RBP22.33■■□□□ 1.17
SCAMP2-203ENST00000563663 LMTK3Q96Q04 1460 aa22.31■■□□□ 1.16
SCAMP2-203ENST00000563663 NPATQ14207 1427 aa22.31■■□□□ 1.16
SCAMP2-203ENST00000563663 WASHC2CQ9Y4E1 1318 aa22.31■■□□□ 1.16
SCAMP2-203ENST00000563663 PREX1Q8TCU6 1659 aa22.3■■□□□ 1.16
SCAMP2-203ENST00000563663 IQGAP3Q86VI3 1631 aa22.3■■□□□ 1.16
SCAMP2-203ENST00000563663 EFCAB6Q5THR3 1501 aa22.28■■□□□ 1.16
SCAMP2-203ENST00000563663 ARHGAP31Q2M1Z3 1444 aa22.28■■□□□ 1.16
SCAMP2-203ENST00000563663 ESF1Q9H501 851 aaKnown RBP22.27■■□□□ 1.16
SCAMP2-203ENST00000563663 SPATA31D1Q6ZQQ2 1576 aa22.27■■□□□ 1.15
SCAMP2-203ENST00000563663 TET3O43151 1660 aa22.26■■□□□ 1.15
SCAMP2-203ENST00000563663 MYO3AQ8NEV4 1616 aa22.26■■□□□ 1.15
SCAMP2-203ENST00000563663 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
SCAMP2-203ENST00000563663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.15
SCAMP2-203ENST00000563663 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
SCAMP2-203ENST00000563663 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
SCAMP2-203ENST00000563663 ERVK-7P63135 1459 aa22.23■■□□□ 1.15
SCAMP2-203ENST00000563663 FBXO31Q5XUX0 539 aaPredicted RBP22.22■■□□□ 1.15
SCAMP2-203ENST00000563663 KANK1Q14678 1352 aa22.21■■□□□ 1.15
SCAMP2-203ENST00000563663 E9PCH4 1651 aa22.21■■□□□ 1.15
SCAMP2-203ENST00000563663 SYNMO15061 1565 aa22.17■■□□□ 1.14
SCAMP2-203ENST00000563663 NUP155O75694 1391 aa22.17■■□□□ 1.14
SCAMP2-203ENST00000563663 UHRF1BP1Q6BDS2 1440 aa22.17■■□□□ 1.14
SCAMP2-203ENST00000563663 RPRD2Q5VT52 1461 aaKnown RBP22.17■■□□□ 1.14
SCAMP2-203ENST00000563663 CEP170BQ9Y4F5 1589 aaPredicted RBP22.17■■□□□ 1.14
SCAMP2-203ENST00000563663 NOS1P29475 1434 aa22.16■■□□□ 1.14
SCAMP2-203ENST00000563663 TNRQ92752 1358 aa22.16■■□□□ 1.14
SCAMP2-203ENST00000563663 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.13
SCAMP2-203ENST00000563663 A2ML1A8K2U0 1454 aa22.11■■□□□ 1.13
SCAMP2-203ENST00000563663 NLRP1Q9C000 1473 aa22.11■■□□□ 1.13
SCAMP2-203ENST00000563663 RAB3GAP2Q9H2M9 1393 aa22.1■■□□□ 1.13
SCAMP2-203ENST00000563663 PIK3C2BO00750 1634 aa22.09■■□□□ 1.13
SCAMP2-203ENST00000563663 STRCQ7RTU9 1775 aa22.09■■□□□ 1.13
SCAMP2-203ENST00000563663 HSPA2P54652 639 aa22.09■■□□□ 1.13
SCAMP2-203ENST00000563663 UBR1Q8IWV7 1749 aa22.07■■□□□ 1.12
SCAMP2-203ENST00000563663 SPHKAPQ2M3C7 1700 aa22.06■■□□□ 1.12
SCAMP2-203ENST00000563663 UGGT1Q9NYU2 1555 aa22.05■■□□□ 1.12
SCAMP2-203ENST00000563663 PTPRTO14522 1441 aa22.04■■□□□ 1.12
SCAMP2-203ENST00000563663 KDM5AP29375 1690 aaKnown RBP22.04■■□□□ 1.12
SCAMP2-203ENST00000563663 PLA2R1Q13018 1463 aa22.03■■□□□ 1.12
SCAMP2-203ENST00000563663 MYO5BQ9ULV0 1848 aa22■■□□□ 1.11
SCAMP2-203ENST00000563663 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
SCAMP2-203ENST00000563663 TRPM2O94759 1503 aa21.99■■□□□ 1.11
SCAMP2-203ENST00000563663 ADGRB3O60242 1522 aa21.98■■□□□ 1.11
SCAMP2-203ENST00000563663 IDI1Q13907 227 aa21.98■■□□□ 1.11
SCAMP2-203ENST00000563663 TRIM52Q96A61 297 aa21.98■■□□□ 1.11
SCAMP2-203ENST00000563663 TMEM131LA2VDJ0 1609 aa21.97■■□□□ 1.11
SCAMP2-203ENST00000563663 CLTCL1P53675 1640 aa21.96■■□□□ 1.11
SCAMP2-203ENST00000563663 NEURL4Q96JN8 1562 aa21.96■■□□□ 1.11
SCAMP2-203ENST00000563663 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
SCAMP2-203ENST00000563663 POLR1AO95602 1720 aaPredicted RBP21.95■■□□□ 1.1
SCAMP2-203ENST00000563663 PKD2Q13563 968 aa21.95■■□□□ 1.1
SCAMP2-203ENST00000563663 SLIT1O75093 1534 aa21.95■■□□□ 1.1
SCAMP2-203ENST00000563663 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
SCAMP2-203ENST00000563663 MPHOSPH9Q99550 1183 aa21.94■■□□□ 1.1
SCAMP2-203ENST00000563663 SLC52A1Q9NWF4 448 aa21.93■■□□□ 1.1
SCAMP2-203ENST00000563663 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
SCAMP2-203ENST00000563663 FOXD1Q16676 465 aa21.9■■□□□ 1.1
SCAMP2-203ENST00000563663 THEMISQ8N1K5 641 aaPredicted RBP21.87■■□□□ 1.09
SCAMP2-203ENST00000563663 MED14O60244 1454 aa21.87■■□□□ 1.09
SCAMP2-203ENST00000563663 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
SCAMP2-203ENST00000563663 ZFYVE9O95405 1425 aa21.86■■□□□ 1.09
SCAMP2-203ENST00000563663 NCKAP5LQ9HCH0 1330 aa21.86■■□□□ 1.09
SCAMP2-203ENST00000563663 KIF1BO60333 1816 aa21.84■■□□□ 1.09
SCAMP2-203ENST00000563663 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.09
SCAMP2-203ENST00000563663 LTKP29376 864 aa21.82■■□□□ 1.08
SCAMP2-203ENST00000563663 IQGAP1P46940 1657 aa21.82■■□□□ 1.08
SCAMP2-203ENST00000563663 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
SCAMP2-203ENST00000563663 SPATA31E1Q6ZUB1 1445 aa21.78■■□□□ 1.08
SCAMP2-203ENST00000563663 NEXMIFQ5QGS0 1516 aa21.78■■□□□ 1.08
SCAMP2-203ENST00000563663 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
SCAMP2-203ENST00000563663 NPHP4O75161 1426 aaPredicted RBP21.77■■□□□ 1.08
SCAMP2-203ENST00000563663 RIMS2Q9UQ26 1411 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms