RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
PDXDC1-208ENST00000563522 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
PDXDC1-208ENST00000563522 CCNB3Q8WWL7 1395 aa13.27□□□□□ -0.29
PDXDC1-208ENST00000563522 ATP7AQ04656 1500 aa13.26□□□□□ -0.29
PDXDC1-208ENST00000563522 PLXNC1O60486 1568 aa13.25□□□□□ -0.29
PDXDC1-208ENST00000563522 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
PDXDC1-208ENST00000563522 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
PDXDC1-208ENST00000563522 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-208ENST00000563522 A2MP01023 1474 aa13.24□□□□□ -0.29
PDXDC1-208ENST00000563522 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
PDXDC1-208ENST00000563522 PKD2Q13563 968 aa13.22□□□□□ -0.29
PDXDC1-208ENST00000563522 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
PDXDC1-208ENST00000563522 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.3
PDXDC1-208ENST00000563522 PTPRKQ15262 1439 aa13.21□□□□□ -0.3
PDXDC1-208ENST00000563522 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
PDXDC1-208ENST00000563522 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
PDXDC1-208ENST00000563522 GGT6Q6P531 493 aa13.19□□□□□ -0.3
PDXDC1-208ENST00000563522 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
PDXDC1-208ENST00000563522 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
PDXDC1-208ENST00000563522 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
PDXDC1-208ENST00000563522 MBD5Q9P267 1494 aa13.18□□□□□ -0.3
PDXDC1-208ENST00000563522 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
PDXDC1-208ENST00000563522 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 CEP170BQ9Y4F5 1589 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 ADGBQ8N7X0 1667 aa13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 DHX29Q7Z478 1369 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
PDXDC1-208ENST00000563522 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
PDXDC1-208ENST00000563522 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
PDXDC1-208ENST00000563522 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
PDXDC1-208ENST00000563522 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
PDXDC1-208ENST00000563522 A2ML1A8K2U0 1454 aa13.15□□□□□ -0.3
PDXDC1-208ENST00000563522 ZNF335Q9H4Z2 1342 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-208ENST00000563522 SOCS7O14512 581 aa13.14□□□□□ -0.31
PDXDC1-208ENST00000563522 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
PDXDC1-208ENST00000563522 SPATA31D1Q6ZQQ2 1576 aa13.12□□□□□ -0.31
PDXDC1-208ENST00000563522 CCDC141Q6ZP82 1450 aa13.12□□□□□ -0.31
PDXDC1-208ENST00000563522 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
PDXDC1-208ENST00000563522 TNRQ92752 1358 aa13.1□□□□□ -0.31
PDXDC1-208ENST00000563522 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
PDXDC1-208ENST00000563522 KIF3BO15066 747 aa13.1□□□□□ -0.31
PDXDC1-208ENST00000563522 PZPP20742 1482 aa13.1□□□□□ -0.31
PDXDC1-208ENST00000563522 DNMT1P26358 1616 aaKnown RBP13.09□□□□□ -0.31
PDXDC1-208ENST00000563522 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
PDXDC1-208ENST00000563522 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
PDXDC1-208ENST00000563522 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
PDXDC1-208ENST00000563522 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
PDXDC1-208ENST00000563522 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
PDXDC1-208ENST00000563522 CPS1P31327 1500 aa13.06□□□□□ -0.32
PDXDC1-208ENST00000563522 ARHGEF5Q12774 1597 aa13.06□□□□□ -0.32
PDXDC1-208ENST00000563522 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
PDXDC1-208ENST00000563522 TSPY4P0CV99 314 aa13.05□□□□□ -0.32
PDXDC1-208ENST00000563522 TSPY10P0CW01 314 aa13.05□□□□□ -0.32
PDXDC1-208ENST00000563522 ANKLE2Q86XL3 938 aa13.05□□□□□ -0.32
PDXDC1-208ENST00000563522 THEMISQ8N1K5 641 aaPredicted RBP13.05□□□□□ -0.32
PDXDC1-208ENST00000563522 SHANK2Q9UPX8 1470 aa13.04□□□□□ -0.32
PDXDC1-208ENST00000563522 NEURL4Q96JN8 1562 aa13.03□□□□□ -0.32
PDXDC1-208ENST00000563522 MED14O60244 1454 aa13.03□□□□□ -0.32
PDXDC1-208ENST00000563522 TOM1O60784 492 aa13.02□□□□□ -0.33
PDXDC1-208ENST00000563522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDXDC1-208ENST00000563522 UGGT1Q9NYU2 1555 aa13.01□□□□□ -0.33
PDXDC1-208ENST00000563522 POLR1AO95602 1720 aaPredicted RBP13.01□□□□□ -0.33
PDXDC1-208ENST00000563522 DEPDC5O75140 1603 aa13□□□□□ -0.33
PDXDC1-208ENST00000563522 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
PDXDC1-208ENST00000563522 NPHP4O75161 1426 aaPredicted RBP13□□□□□ -0.33
PDXDC1-208ENST00000563522 RNF17Q9BXT8 1623 aaKnown RBP12.99□□□□□ -0.33
PDXDC1-208ENST00000563522 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
PDXDC1-208ENST00000563522 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
PDXDC1-208ENST00000563522 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
PDXDC1-208ENST00000563522 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
PDXDC1-208ENST00000563522 ABCC3O15438 1527 aa12.98□□□□□ -0.33
PDXDC1-208ENST00000563522 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
PDXDC1-208ENST00000563522 HSPA1LP34931 641 aa12.97□□□□□ -0.33
PDXDC1-208ENST00000563522 EIF2AK4Q9P2K8 1649 aaKnown RBP12.97□□□□□ -0.33
PDXDC1-208ENST00000563522 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
PDXDC1-208ENST00000563522 ERVK-7P63135 1459 aa12.96□□□□□ -0.34
PDXDC1-208ENST00000563522 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.34
PDXDC1-208ENST00000563522 DUOX2Q9NRD8 1548 aa12.93□□□□□ -0.34
PDXDC1-208ENST00000563522 IQGAP1P46940 1657 aa12.93□□□□□ -0.34
PDXDC1-208ENST00000563522 MROH1Q8NDA8 1641 aa12.92□□□□□ -0.34
PDXDC1-208ENST00000563522 MED1Q15648 1581 aaPredicted RBP12.92□□□□□ -0.34
PDXDC1-208ENST00000563522 ARHGAP31Q2M1Z3 1444 aa12.92□□□□□ -0.34
PDXDC1-208ENST00000563522 KANK4Q5T7N3 995 aaPredicted RBP12.91□□□□□ -0.34
PDXDC1-208ENST00000563522 ERBINQ96RT1 1412 aa12.9□□□□□ -0.34
PDXDC1-208ENST00000563522 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
PDXDC1-208ENST00000563522 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
PDXDC1-208ENST00000563522 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-208ENST00000563522 SYNMO15061 1565 aa12.9□□□□□ -0.35
PDXDC1-208ENST00000563522 SLIT1O75093 1534 aa12.89□□□□□ -0.35
PDXDC1-208ENST00000563522 KIF15Q9NS87 1388 aa12.89□□□□□ -0.35
PDXDC1-208ENST00000563522 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
PDXDC1-208ENST00000563522 PRDM15P57071 1507 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-208ENST00000563522 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
PDXDC1-208ENST00000563522 ABCC5O15440 1437 aa12.87□□□□□ -0.35
PDXDC1-208ENST00000563522 KANK1Q14678 1352 aa12.86□□□□□ -0.35
PDXDC1-208ENST00000563522 UBR1Q8IWV7 1749 aa12.86□□□□□ -0.35
PDXDC1-208ENST00000563522 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
PDXDC1-208ENST00000563522 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms