RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
UBFD1-202ENST00000563366 KIAA1107Q9UPP5 1409 aa14.28□□□□□ -0.12
UBFD1-202ENST00000563366 MAST1Q9Y2H9 1570 aa14.28□□□□□ -0.12
UBFD1-202ENST00000563366 ABCC1P33527 1531 aa14.26□□□□□ -0.13
UBFD1-202ENST00000563366 SYCP2Q9BX26 1530 aa14.26□□□□□ -0.13
UBFD1-202ENST00000563366 ANKRD30AQ9BXX3 1397 aa14.26□□□□□ -0.13
UBFD1-202ENST00000563366 ZNF644Q9H582 1327 aaPredicted RBP14.26□□□□□ -0.13
UBFD1-202ENST00000563366 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
UBFD1-202ENST00000563366 EFCAB2Q5VUJ9 269 aa14.25□□□□□ -0.13
UBFD1-202ENST00000563366 MBD5Q9P267 1494 aa14.25□□□□□ -0.13
UBFD1-202ENST00000563366 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
UBFD1-202ENST00000563366 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
UBFD1-202ENST00000563366 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
UBFD1-202ENST00000563366 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
UBFD1-202ENST00000563366 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
UBFD1-202ENST00000563366 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
UBFD1-202ENST00000563366 FANCAO15360 1455 aa14.21□□□□□ -0.13
UBFD1-202ENST00000563366 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
UBFD1-202ENST00000563366 CHIC2Q9UKJ5 165 aa14.21□□□□□ -0.13
UBFD1-202ENST00000563366 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
UBFD1-202ENST00000563366 GLI2P10070 1586 aa14.19□□□□□ -0.14
UBFD1-202ENST00000563366 RRP7BPQ9NSQ0 103 aa14.19□□□□□ -0.14
UBFD1-202ENST00000563366 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
UBFD1-202ENST00000563366 KDM6BO15054 1643 aa14.17□□□□□ -0.14
UBFD1-202ENST00000563366 MAP3K4Q9Y6R4 1608 aa14.17□□□□□ -0.14
UBFD1-202ENST00000563366 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
UBFD1-202ENST00000563366 HNRNPMP52272 730 aaKnown RBP eCLIP14.16□□□□□ -0.143e-6■■■■□ 21.2
UBFD1-202ENST00000563366 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
UBFD1-202ENST00000563366 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
UBFD1-202ENST00000563366 KIF15Q9NS87 1388 aa14.15□□□□□ -0.14
UBFD1-202ENST00000563366 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
UBFD1-202ENST00000563366 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
UBFD1-202ENST00000563366 NEO1Q92859 1461 aa14.14□□□□□ -0.15
UBFD1-202ENST00000563366 DUOX2Q9NRD8 1548 aa14.14□□□□□ -0.15
UBFD1-202ENST00000563366 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
UBFD1-202ENST00000563366 KDM5DQ9BY66 1539 aa14.13□□□□□ -0.15
UBFD1-202ENST00000563366 ARHGEF12Q9NZN5 1544 aa14.13□□□□□ -0.15
UBFD1-202ENST00000563366 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
UBFD1-202ENST00000563366 ZFYVE16Q7Z3T8 1539 aa14.12□□□□□ -0.15
UBFD1-202ENST00000563366 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
UBFD1-202ENST00000563366 UNC13BO14795 1591 aa14.11□□□□□ -0.15
UBFD1-202ENST00000563366 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
UBFD1-202ENST00000563366 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
UBFD1-202ENST00000563366 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
UBFD1-202ENST00000563366 TRIM52Q96A61 297 aa14.1□□□□□ -0.15
UBFD1-202ENST00000563366 GSE1Q14687 1217 aa14.09□□□□□ -0.15
UBFD1-202ENST00000563366 KDM5CP41229 1560 aa14.09□□□□□ -0.15
UBFD1-202ENST00000563366 EIF2AK4Q9P2K8 1649 aaKnown RBP14.08□□□□□ -0.15
UBFD1-202ENST00000563366 SCAPERQ9BY12 1400 aa14.08□□□□□ -0.15
UBFD1-202ENST00000563366 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.15
UBFD1-202ENST00000563366 NUBP1P53384 320 aa14.08□□□□□ -0.16
UBFD1-202ENST00000563366 SPAG9O60271 1321 aaKnown RBP14.08□□□□□ -0.16
UBFD1-202ENST00000563366 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
UBFD1-202ENST00000563366 HECW2Q9P2P5 1572 aa14.06□□□□□ -0.16
UBFD1-202ENST00000563366 RGL2O15211 777 aa14.06□□□□□ -0.16
UBFD1-202ENST00000563366 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
UBFD1-202ENST00000563366 POGZQ7Z3K3 1410 aa14.06□□□□□ -0.16
UBFD1-202ENST00000563366 IQGAP3Q86VI3 1631 aa14.05□□□□□ -0.16
UBFD1-202ENST00000563366 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
UBFD1-202ENST00000563366 PZPP20742 1482 aa14.05□□□□□ -0.16
UBFD1-202ENST00000563366 MAGI2Q86UL8 1455 aa14.04□□□□□ -0.16
UBFD1-202ENST00000563366 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
UBFD1-202ENST00000563366 KIF13AQ9H1H9 1805 aa14.04□□□□□ -0.16
UBFD1-202ENST00000563366 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
UBFD1-202ENST00000563366 DENND4BO75064 1496 aaPredicted RBP14.03□□□□□ -0.16
UBFD1-202ENST00000563366 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
UBFD1-202ENST00000563366 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
UBFD1-202ENST00000563366 MLH3Q9UHC1 1453 aa14.02□□□□□ -0.16
UBFD1-202ENST00000563366 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
UBFD1-202ENST00000563366 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
UBFD1-202ENST00000563366 NUP155O75694 1391 aa14□□□□□ -0.17
UBFD1-202ENST00000563366 TONSLQ96HA7 1378 aa14□□□□□ -0.17
UBFD1-202ENST00000563366 PLCB2Q00722 1185 aa14□□□□□ -0.17
UBFD1-202ENST00000563366 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
UBFD1-202ENST00000563366 PPRC1Q5VV67 1664 aaKnown RBP14□□□□□ -0.17
UBFD1-202ENST00000563366 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
UBFD1-202ENST00000563366 TSPOAP1O95153 1857 aa13.99□□□□□ -0.17
UBFD1-202ENST00000563366 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
UBFD1-202ENST00000563366 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
UBFD1-202ENST00000563366 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
UBFD1-202ENST00000563366 RPRD2Q5VT52 1461 aaKnown RBP13.97□□□□□ -0.17
UBFD1-202ENST00000563366 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.17
UBFD1-202ENST00000563366 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
UBFD1-202ENST00000563366 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
UBFD1-202ENST00000563366 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.18
UBFD1-202ENST00000563366 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
UBFD1-202ENST00000563366 NEUROD1Q13562 356 aa13.95□□□□□ -0.18
UBFD1-202ENST00000563366 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
UBFD1-202ENST00000563366 KANK1Q14678 1352 aa13.95□□□□□ -0.18
UBFD1-202ENST00000563366 TET3O43151 1660 aa13.95□□□□□ -0.18
UBFD1-202ENST00000563366 A2MP01023 1474 aa13.94□□□□□ -0.18
UBFD1-202ENST00000563366 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
UBFD1-202ENST00000563366 FRMPD1Q5SYB0 1578 aa13.93□□□□□ -0.18
UBFD1-202ENST00000563366 RASEFQ8IZ41 740 aa13.93□□□□□ -0.18
UBFD1-202ENST00000563366 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
UBFD1-202ENST00000563366 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
UBFD1-202ENST00000563366 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
UBFD1-202ENST00000563366 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
UBFD1-202ENST00000563366 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
UBFD1-202ENST00000563366 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms