RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
SNX29-202ENST00000563308 JCADQ9P266 1359 aa16.42■□□□□ 0.22
SNX29-202ENST00000563308 IQGAP1P46940 1657 aa16.42■□□□□ 0.22
SNX29-202ENST00000563308 MED14O60244 1454 aa16.42■□□□□ 0.22
SNX29-202ENST00000563308 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
SNX29-202ENST00000563308 TNRQ92752 1358 aa16.41■□□□□ 0.22
SNX29-202ENST00000563308 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
SNX29-202ENST00000563308 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
SNX29-202ENST00000563308 DEPDC5O75140 1603 aa16.4■□□□□ 0.22
SNX29-202ENST00000563308 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
SNX29-202ENST00000563308 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
SNX29-202ENST00000563308 ABCC1P33527 1531 aa16.4■□□□□ 0.22
SNX29-202ENST00000563308 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
SNX29-202ENST00000563308 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
SNX29-202ENST00000563308 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
SNX29-202ENST00000563308 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
SNX29-202ENST00000563308 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
SNX29-202ENST00000563308 CDK12Q9NYV4 1490 aaPredicted RBP16.37■□□□□ 0.21
SNX29-202ENST00000563308 SPAG9O60271 1321 aaKnown RBP16.36■□□□□ 0.21
SNX29-202ENST00000563308 ROBO1Q9Y6N7 1651 aa16.35■□□□□ 0.21
SNX29-202ENST00000563308 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
SNX29-202ENST00000563308 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
SNX29-202ENST00000563308 SPATA31A6Q5VVP1 1343 aa16.34■□□□□ 0.21
SNX29-202ENST00000563308 IFFO2Q5TF58 517 aa16.33■□□□□ 0.2
SNX29-202ENST00000563308 PREX2Q70Z35 1606 aa16.33■□□□□ 0.2
SNX29-202ENST00000563308 PHLPP1O60346 1717 aa16.31■□□□□ 0.2
SNX29-202ENST00000563308 LRRC9Q6ZRR7 1453 aa16.31■□□□□ 0.2
SNX29-202ENST00000563308 FBXO31Q5XUX0 539 aaPredicted RBP16.31■□□□□ 0.2
SNX29-202ENST00000563308 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
SNX29-202ENST00000563308 A2MP01023 1474 aa16.3■□□□□ 0.2
SNX29-202ENST00000563308 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
SNX29-202ENST00000563308 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
SNX29-202ENST00000563308 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
SNX29-202ENST00000563308 CDC42BPAQ5VT25 1732 aa16.28■□□□□ 0.2
SNX29-202ENST00000563308 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
SNX29-202ENST00000563308 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
SNX29-202ENST00000563308 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.2
SNX29-202ENST00000563308 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
SNX29-202ENST00000563308 XIRP1Q702N8 1843 aaKnown RBP16.24■□□□□ 0.19
SNX29-202ENST00000563308 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
SNX29-202ENST00000563308 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
SNX29-202ENST00000563308 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
SNX29-202ENST00000563308 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
SNX29-202ENST00000563308 LRP6O75581 1613 aa16.23■□□□□ 0.19
SNX29-202ENST00000563308 PZPP20742 1482 aa16.22■□□□□ 0.19
SNX29-202ENST00000563308 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
SNX29-202ENST00000563308 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
SNX29-202ENST00000563308 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
SNX29-202ENST00000563308 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
SNX29-202ENST00000563308 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
SNX29-202ENST00000563308 SLAIN2Q9P270 581 aa16.21■□□□□ 0.19
SNX29-202ENST00000563308 MTUS2Q5JR59 1369 aa16.21■□□□□ 0.19
SNX29-202ENST00000563308 WASHC2CQ9Y4E1 1318 aa16.2■□□□□ 0.18
SNX29-202ENST00000563308 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.185e-9■■■□□ 17
SNX29-202ENST00000563308 MSH6P52701 1360 aa16.2■□□□□ 0.18
SNX29-202ENST00000563308 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
SNX29-202ENST00000563308 AFF2P51816 1311 aa16.19■□□□□ 0.18
SNX29-202ENST00000563308 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
SNX29-202ENST00000563308 SYCP2Q9BX26 1530 aa16.19■□□□□ 0.18
SNX29-202ENST00000563308 CCDC125Q86Z20 511 aa16.19■□□□□ 0.18
SNX29-202ENST00000563308 QTRT2Q9H974 415 aaKnown RBP16.19■□□□□ 0.18
SNX29-202ENST00000563308 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
SNX29-202ENST00000563308 RGS12O14924 1447 aa16.19■□□□□ 0.18
SNX29-202ENST00000563308 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
SNX29-202ENST00000563308 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
SNX29-202ENST00000563308 TXNDC2Q86VQ3 553 aa16.17■□□□□ 0.18
SNX29-202ENST00000563308 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
SNX29-202ENST00000563308 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
SNX29-202ENST00000563308 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
SNX29-202ENST00000563308 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
SNX29-202ENST00000563308 ADGBQ8N7X0 1667 aa16.16■□□□□ 0.18
SNX29-202ENST00000563308 YY1P25490 414 aa16.16■□□□□ 0.18
SNX29-202ENST00000563308 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
SNX29-202ENST00000563308 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
SNX29-202ENST00000563308 KIF3BO15066 747 aa16.13■□□□□ 0.17
SNX29-202ENST00000563308 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
SNX29-202ENST00000563308 KCNA6P17658 529 aa16.12■□□□□ 0.17
SNX29-202ENST00000563308 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
SNX29-202ENST00000563308 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
SNX29-202ENST00000563308 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
SNX29-202ENST00000563308 LRP5O75197 1615 aa16.1■□□□□ 0.17
SNX29-202ENST00000563308 C8orf37Q96NL8 207 aa16.1■□□□□ 0.17
SNX29-202ENST00000563308 SHPRHQ149N8 1683 aa16.1■□□□□ 0.17
SNX29-202ENST00000563308 MAP3K1Q13233 1512 aa16.06■□□□□ 0.16
SNX29-202ENST00000563308 LTKP29376 864 aa16.06■□□□□ 0.16
SNX29-202ENST00000563308 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
SNX29-202ENST00000563308 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
SNX29-202ENST00000563308 ABCC3O15438 1527 aa16.04■□□□□ 0.16
SNX29-202ENST00000563308 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
SNX29-202ENST00000563308 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
SNX29-202ENST00000563308 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
SNX29-202ENST00000563308 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
SNX29-202ENST00000563308 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
SNX29-202ENST00000563308 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
SNX29-202ENST00000563308 BCANQ96GW7 911 aa16.02■□□□□ 0.16
SNX29-202ENST00000563308 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
SNX29-202ENST00000563308 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
SNX29-202ENST00000563308 NWD1Q149M9 1564 aa16■□□□□ 0.15
SNX29-202ENST00000563308 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
SNX29-202ENST00000563308 NKTRP30414 1462 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms