RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 MTUS2Q5JR59 1369 aa29.95■■■□□ 2.39
KATNB1-202ENST00000562542 FBXO31Q5XUX0 539 aaPredicted RBP29.94■■■□□ 2.38
KATNB1-202ENST00000562542 NEURL4Q96JN8 1562 aa29.94■■■□□ 2.38
KATNB1-202ENST00000562542 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
KATNB1-202ENST00000562542 ZNF644Q9H582 1327 aaPredicted RBP29.93■■■□□ 2.38
KATNB1-202ENST00000562542 ANKLE2Q86XL3 938 aa29.91■■■□□ 2.38
KATNB1-202ENST00000562542 KIF3BO15066 747 aa29.89■■■□□ 2.38
KATNB1-202ENST00000562542 DHX29Q7Z478 1369 aaKnown RBP29.89■■■□□ 2.37
KATNB1-202ENST00000562542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.89■■■□□ 2.37
KATNB1-202ENST00000562542 RTEL1-TNFRSF6BF6WH68 1400 aa29.87■■■□□ 2.37
KATNB1-202ENST00000562542 SENP3Q9H4L4 574 aaPredicted RBP29.86■■■□□ 2.37
KATNB1-202ENST00000562542 PZPP20742 1482 aa29.86■■■□□ 2.37
KATNB1-202ENST00000562542 THEMISQ8N1K5 641 aaPredicted RBP29.85■■■□□ 2.37
KATNB1-202ENST00000562542 WASHC2CQ9Y4E1 1318 aa29.85■■■□□ 2.37
KATNB1-202ENST00000562542 MBD5Q9P267 1494 aa29.85■■■□□ 2.37
KATNB1-202ENST00000562542 KDM5DQ9BY66 1539 aa29.85■■■□□ 2.37
KATNB1-202ENST00000562542 TIAM1Q13009 1591 aa29.83■■■□□ 2.37
KATNB1-202ENST00000562542 VWDEQ8N2E2 1590 aa29.83■■■□□ 2.37
KATNB1-202ENST00000562542 NPHP4O75161 1426 aaPredicted RBP29.82■■■□□ 2.36
KATNB1-202ENST00000562542 UGGT1Q9NYU2 1555 aa29.79■■■□□ 2.36
KATNB1-202ENST00000562542 FAM135AQ9P2D6 1515 aa29.79■■■□□ 2.36
KATNB1-202ENST00000562542 NLRP1Q9C000 1473 aa29.78■■■□□ 2.36
KATNB1-202ENST00000562542 MIA2Q96PC5 1412 aa29.78■■■□□ 2.36
KATNB1-202ENST00000562542 MED14O60244 1454 aa29.75■■■□□ 2.35
KATNB1-202ENST00000562542 ALKQ9UM73 1620 aa29.75■■■□□ 2.35
KATNB1-202ENST00000562542 EHBP1L1Q8N3D4 1523 aa29.75■■■□□ 2.35
KATNB1-202ENST00000562542 DEPDC5O75140 1603 aa29.74■■■□□ 2.35
KATNB1-202ENST00000562542 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
KATNB1-202ENST00000562542 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
KATNB1-202ENST00000562542 CEP162Q5TB80 1403 aa29.69■■■□□ 2.34
KATNB1-202ENST00000562542 LRRC7Q96NW7 1537 aa29.67■■■□□ 2.34
KATNB1-202ENST00000562542 RNF17Q9BXT8 1623 aaKnown RBP29.66■■■□□ 2.34
KATNB1-202ENST00000562542 CAMSAP2Q08AD1 1489 aa29.66■■■□□ 2.34
KATNB1-202ENST00000562542 RSPH4AQ5TD94 716 aa29.65■■■□□ 2.34
KATNB1-202ENST00000562542 SYNMO15061 1565 aa29.63■■■□□ 2.33
KATNB1-202ENST00000562542 STRCP1A6NGW2 1772 aa29.62■■■□□ 2.33
KATNB1-202ENST00000562542 TSPY4P0CV99 314 aa29.6■■■□□ 2.33
KATNB1-202ENST00000562542 TSPY10P0CW01 314 aa29.6■■■□□ 2.33
KATNB1-202ENST00000562542 NCOA2Q15596 1464 aa29.56■■■□□ 2.32
KATNB1-202ENST00000562542 ABCC3O15438 1527 aa29.55■■■□□ 2.32
KATNB1-202ENST00000562542 RGS17Q9UGC6 210 aaPredicted RBP29.53■■■□□ 2.32
KATNB1-202ENST00000562542 ERVK-7P63135 1459 aa29.53■■■□□ 2.32
KATNB1-202ENST00000562542 ZC3H13Q5T200 1668 aaKnown RBP29.52■■■□□ 2.32
KATNB1-202ENST00000562542 ARHGEF5Q12774 1597 aa29.52■■■□□ 2.32
KATNB1-202ENST00000562542 SCAF11Q99590 1463 aaKnown RBP29.5■■■□□ 2.31
KATNB1-202ENST00000562542 TXNDC2Q86VQ3 553 aa29.46■■■□□ 2.31
KATNB1-202ENST00000562542 UBR1Q8IWV7 1749 aa29.45■■■□□ 2.3
KATNB1-202ENST00000562542 LTKP29376 864 aa29.42■■■□□ 2.3
KATNB1-202ENST00000562542 EID1Q9Y6B2 187 aa29.41■■■□□ 2.3
KATNB1-202ENST00000562542 EIF2AK4Q9P2K8 1649 aaKnown RBP29.41■■■□□ 2.3
KATNB1-202ENST00000562542 CEP152O94986 1710 aa29.4■■■□□ 2.3
KATNB1-202ENST00000562542 CFAP65Q6ZU64 1925 aaKnown RBP29.38■■■□□ 2.29
KATNB1-202ENST00000562542 MAST1Q9Y2H9 1570 aa29.38■■■□□ 2.29
KATNB1-202ENST00000562542 MROH1Q8NDA8 1641 aa29.37■■■□□ 2.29
KATNB1-202ENST00000562542 ARHGAP23Q9P227 1491 aa29.36■■■□□ 2.29
KATNB1-202ENST00000562542 SLIT1O75093 1534 aa29.36■■■□□ 2.29
KATNB1-202ENST00000562542 POTEAQ6S8J7 498 aa29.36■■■□□ 2.29
KATNB1-202ENST00000562542 FAM135BQ49AJ0 1406 aa29.36■■■□□ 2.29
KATNB1-202ENST00000562542 XIRP1Q702N8 1843 aaKnown RBP29.35■■■□□ 2.29
KATNB1-202ENST00000562542 STAG3Q9UJ98 1225 aa29.33■■■□□ 2.29
KATNB1-202ENST00000562542 TMEM94Q12767 1356 aa29.3■■■□□ 2.28
KATNB1-202ENST00000562542 DUOX2Q9NRD8 1548 aa29.28■■■□□ 2.28
KATNB1-202ENST00000562542 TMEM2Q9UHN6 1383 aa29.26■■■□□ 2.28
KATNB1-202ENST00000562542 ARHGAP31Q2M1Z3 1444 aa29.25■■■□□ 2.27
KATNB1-202ENST00000562542 ROBO1Q9Y6N7 1651 aa29.25■■■□□ 2.27
KATNB1-202ENST00000562542 PIK3C2BO00750 1634 aa29.24■■■□□ 2.27
KATNB1-202ENST00000562542 PROSER2Q86WR7 435 aaPredicted RBP29.24■■■□□ 2.27
KATNB1-202ENST00000562542 RBM33Q96EV2 1170 aaKnown RBP29.24■■■□□ 2.27
KATNB1-202ENST00000562542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.24■■■□□ 2.271e-6■■□□□ 12.2
KATNB1-202ENST00000562542 LRRC9Q6ZRR7 1453 aa29.23■■■□□ 2.27
KATNB1-202ENST00000562542 KCNA6P17658 529 aa29.22■■■□□ 2.27
KATNB1-202ENST00000562542 PRDM15P57071 1507 aaPredicted RBP29.21■■■□□ 2.27
KATNB1-202ENST00000562542 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.27
KATNB1-202ENST00000562542 SLC26A8Q96RN1 970 aa29.2■■■□□ 2.26
KATNB1-202ENST00000562542 KIF15Q9NS87 1388 aa29.2■■■□□ 2.26
KATNB1-202ENST00000562542 EFCAB6Q5THR3 1501 aa29.18■■■□□ 2.26
KATNB1-202ENST00000562542 MAP3K1Q13233 1512 aa29.17■■■□□ 2.26
KATNB1-202ENST00000562542 RRP7BPQ9NSQ0 103 aa29.17■■■□□ 2.26
KATNB1-202ENST00000562542 KANK1Q14678 1352 aa29.16■■■□□ 2.26
KATNB1-202ENST00000562542 ERBINQ96RT1 1412 aa29.16■■■□□ 2.26
KATNB1-202ENST00000562542 SETD1AO15047 1707 aaKnown RBP29.16■■■□□ 2.26
KATNB1-202ENST00000562542 BCANQ96GW7 911 aa29.15■■■□□ 2.26
KATNB1-202ENST00000562542 MSH6P52701 1360 aa29.13■■■□□ 2.25
KATNB1-202ENST00000562542 IDI1Q13907 227 aa29.13■■■□□ 2.25
KATNB1-202ENST00000562542 JCADQ9P266 1359 aa29.11■■■□□ 2.25
KATNB1-202ENST00000562542 NKTRP30414 1462 aaKnown RBP29.1■■■□□ 2.25
KATNB1-202ENST00000562542 KANK4Q5T7N3 995 aaPredicted RBP29.1■■■□□ 2.25
KATNB1-202ENST00000562542 KDM5AP29375 1690 aaKnown RBP29.09■■■□□ 2.25
KATNB1-202ENST00000562542 PHLPP1O60346 1717 aa29.09■■■□□ 2.25
KATNB1-202ENST00000562542 SLAIN2Q9P270 581 aa29.09■■■□□ 2.25
KATNB1-202ENST00000562542 VPS8Q8N3P4 1428 aa29.09■■■□□ 2.25
KATNB1-202ENST00000562542 TET3O43151 1660 aa29.09■■■□□ 2.25
KATNB1-202ENST00000562542 NWD1Q149M9 1564 aa29.05■■■□□ 2.24
KATNB1-202ENST00000562542 ABCC5O15440 1437 aa29.04■■■□□ 2.24
KATNB1-202ENST00000562542 CROCC2H7BZ55 1655 aa29.03■■■□□ 2.24
KATNB1-202ENST00000562542 MEX3CQ5U5Q3 659 aaKnown RBP29.03■■■□□ 2.24
KATNB1-202ENST00000562542 ADGRB3O60242 1522 aa29.02■■■□□ 2.24
KATNB1-202ENST00000562542 LMTK2Q8IWU2 1503 aa28.99■■■□□ 2.23
KATNB1-202ENST00000562542 TRIM52Q96A61 297 aa28.98■■■□□ 2.23
KATNB1-202ENST00000562542 C14orf37Q86TY3 774 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms