RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
CDH1-204ENST00000562118 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
CDH1-204ENST00000562118 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
CDH1-204ENST00000562118 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
CDH1-204ENST00000562118 C3P01024 1663 aa20.54■□□□□ 0.88
CDH1-204ENST00000562118 CLTCQ00610 1675 aaKnown RBP20.54■□□□□ 0.88
CDH1-204ENST00000562118 UNC13BO14795 1591 aa20.53■□□□□ 0.88
CDH1-204ENST00000562118 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
CDH1-204ENST00000562118 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
CDH1-204ENST00000562118 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
CDH1-204ENST00000562118 ABCC3O15438 1527 aa20.49■□□□□ 0.87
CDH1-204ENST00000562118 LMTK2Q8IWU2 1503 aa20.49■□□□□ 0.87
CDH1-204ENST00000562118 HFM1A2PYH4 1435 aa20.48■□□□□ 0.87
CDH1-204ENST00000562118 NAIPQ13075 1403 aa20.47■□□□□ 0.87
CDH1-204ENST00000562118 KIF3BO15066 747 aa20.47■□□□□ 0.87
CDH1-204ENST00000562118 CEP152O94986 1710 aa20.47■□□□□ 0.87
CDH1-204ENST00000562118 MLECQ14165 292 aa20.46■□□□□ 0.87
CDH1-204ENST00000562118 CAMSAP1Q5T5Y3 1602 aa20.45■□□□□ 0.86
CDH1-204ENST00000562118 IQGAP3Q86VI3 1631 aa20.42■□□□□ 0.86
CDH1-204ENST00000562118 NPATQ14207 1427 aa20.42■□□□□ 0.86
CDH1-204ENST00000562118 PZPP20742 1482 aa20.42■□□□□ 0.86
CDH1-204ENST00000562118 GGT6Q6P531 493 aa20.41■□□□□ 0.86
CDH1-204ENST00000562118 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
CDH1-204ENST00000562118 ARHGAP31Q2M1Z3 1444 aa20.41■□□□□ 0.86
CDH1-204ENST00000562118 SETD1BQ9UPS6 1966 aaKnown RBP20.41■□□□□ 0.86
CDH1-204ENST00000562118 PREX1Q8TCU6 1659 aa20.39■□□□□ 0.86
CDH1-204ENST00000562118 TET3O43151 1660 aa20.38■□□□□ 0.85
CDH1-204ENST00000562118 EFCAB6Q5THR3 1501 aa20.38■□□□□ 0.85
CDH1-204ENST00000562118 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
CDH1-204ENST00000562118 ITGAEP38570 1179 aa20.37■□□□□ 0.85
CDH1-204ENST00000562118 ZNF142P52746 1687 aaPredicted RBP20.35■□□□□ 0.85
CDH1-204ENST00000562118 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
CDH1-204ENST00000562118 LMTK3Q96Q04 1460 aa20.33■□□□□ 0.85
CDH1-204ENST00000562118 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
CDH1-204ENST00000562118 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
CDH1-204ENST00000562118 KANK1Q14678 1352 aa20.32■□□□□ 0.84
CDH1-204ENST00000562118 ESF1Q9H501 851 aaKnown RBP20.31■□□□□ 0.84
CDH1-204ENST00000562118 ERVK-7P63135 1459 aa20.3■□□□□ 0.84
CDH1-204ENST00000562118 E9PCH4 1651 aa20.3■□□□□ 0.84
CDH1-204ENST00000562118 CEBPAP49715 358 aaPredicted RBP20.3■□□□□ 0.84
CDH1-204ENST00000562118 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
CDH1-204ENST00000562118 NOS1P29475 1434 aa20.27■□□□□ 0.83
CDH1-204ENST00000562118 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
CDH1-204ENST00000562118 SYNMO15061 1565 aa20.25■□□□□ 0.83
CDH1-204ENST00000562118 CEP170BQ9Y4F5 1589 aaPredicted RBP20.25■□□□□ 0.83
CDH1-204ENST00000562118 KDM5AP29375 1690 aaKnown RBP20.24■□□□□ 0.83
CDH1-204ENST00000562118 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
CDH1-204ENST00000562118 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
CDH1-204ENST00000562118 PIK3C2BO00750 1634 aa20.23■□□□□ 0.83
CDH1-204ENST00000562118 NUP155O75694 1391 aa20.22■□□□□ 0.83
CDH1-204ENST00000562118 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
CDH1-204ENST00000562118 TNRQ92752 1358 aa20.21■□□□□ 0.83
CDH1-204ENST00000562118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDH1-204ENST00000562118 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
CDH1-204ENST00000562118 ACIN1Q9UKV3 1341 aaKnown RBP20.21■□□□□ 0.83
CDH1-204ENST00000562118 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
CDH1-204ENST00000562118 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
CDH1-204ENST00000562118 HRCP23327 699 aa20.19■□□□□ 0.82
CDH1-204ENST00000562118 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
CDH1-204ENST00000562118 PTPRTO14522 1441 aa20.18■□□□□ 0.82
CDH1-204ENST00000562118 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
CDH1-204ENST00000562118 STRCQ7RTU9 1775 aa20.15■□□□□ 0.82
CDH1-204ENST00000562118 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
CDH1-204ENST00000562118 TRPM2O94759 1503 aa20.13■□□□□ 0.81
CDH1-204ENST00000562118 UGGT1Q9NYU2 1555 aa20.12■□□□□ 0.81
CDH1-204ENST00000562118 ADGRB3O60242 1522 aa20.11■□□□□ 0.81
CDH1-204ENST00000562118 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
CDH1-204ENST00000562118 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
CDH1-204ENST00000562118 SLIT1O75093 1534 aa20.08■□□□□ 0.81
CDH1-204ENST00000562118 ARHGAP23Q9P227 1491 aa20.08■□□□□ 0.81
CDH1-204ENST00000562118 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
CDH1-204ENST00000562118 POLR1AO95602 1720 aaPredicted RBP20.07■□□□□ 0.8
CDH1-204ENST00000562118 MYO5BQ9ULV0 1848 aa20.06■□□□□ 0.8
CDH1-204ENST00000562118 CLTCL1P53675 1640 aa20.06■□□□□ 0.8
CDH1-204ENST00000562118 SLC52A1Q9NWF4 448 aa20.06■□□□□ 0.8
CDH1-204ENST00000562118 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
CDH1-204ENST00000562118 IDI1Q13907 227 aa20.02■□□□□ 0.8
CDH1-204ENST00000562118 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.8
CDH1-204ENST00000562118 SLC4A1APQ9BWU0 796 aaKnown RBP20.02■□□□□ 0.8
CDH1-204ENST00000562118 MED14O60244 1454 aa20.01■□□□□ 0.79
CDH1-204ENST00000562118 HSPA2P54652 639 aa20.01■□□□□ 0.79
CDH1-204ENST00000562118 PKD2Q13563 968 aa20.01■□□□□ 0.79
CDH1-204ENST00000562118 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
CDH1-204ENST00000562118 KIF1BO60333 1816 aa19.99■□□□□ 0.79
CDH1-204ENST00000562118 ZFYVE9O95405 1425 aa19.98■□□□□ 0.79
CDH1-204ENST00000562118 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
CDH1-204ENST00000562118 TMEM2Q9UHN6 1383 aa19.96■□□□□ 0.79
CDH1-204ENST00000562118 IQGAP1P46940 1657 aa19.94■□□□□ 0.78
CDH1-204ENST00000562118 SCAF11Q99590 1463 aaKnown RBP19.93■□□□□ 0.78
CDH1-204ENST00000562118 ANKRD30BQ9BXX2 1392 aa19.93■□□□□ 0.78
CDH1-204ENST00000562118 IFT172Q9UG01 1749 aa19.91■□□□□ 0.78
CDH1-204ENST00000562118 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
CDH1-204ENST00000562118 NEXMIFQ5QGS0 1516 aa19.91■□□□□ 0.78
CDH1-204ENST00000562118 PPLO60437 1756 aa19.89■□□□□ 0.77
CDH1-204ENST00000562118 FOXD1Q16676 465 aa19.89■□□□□ 0.77
CDH1-204ENST00000562118 CCDC144AA2RUR9 1427 aa19.88■□□□□ 0.77
CDH1-204ENST00000562118 RIMS2Q9UQ26 1411 aa19.86■□□□□ 0.77
CDH1-204ENST00000562118 LTKP29376 864 aa19.86■□□□□ 0.77
CDH1-204ENST00000562118 ANKLE2Q86XL3 938 aa19.86■□□□□ 0.77
CDH1-204ENST00000562118 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms