RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 TNRQ92752 1358 aa21.59■■□□□ 1.05
CCP110-205ENST00000562083 ANKLE2Q86XL3 938 aa21.58■■□□□ 1.05
CCP110-205ENST00000562083 NPHP4O75161 1426 aaPredicted RBP21.57■■□□□ 1.04
CCP110-205ENST00000562083 RNF17Q9BXT8 1623 aaKnown RBP21.56■■□□□ 1.04
CCP110-205ENST00000562083 SRCAPQ6ZRS2 3230 aa21.55■■□□□ 1.04
CCP110-205ENST00000562083 MED14O60244 1454 aa21.55■■□□□ 1.04
CCP110-205ENST00000562083 IQGAP1P46940 1657 aa21.53■■□□□ 1.04
CCP110-205ENST00000562083 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
CCP110-205ENST00000562083 DEPDC5O75140 1603 aa21.52■■□□□ 1.04
CCP110-205ENST00000562083 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
CCP110-205ENST00000562083 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
CCP110-205ENST00000562083 PZPP20742 1482 aa21.48■■□□□ 1.03
CCP110-205ENST00000562083 THEMISQ8N1K5 641 aaPredicted RBP21.48■■□□□ 1.03
CCP110-205ENST00000562083 SYNMO15061 1565 aa21.48■■□□□ 1.03
CCP110-205ENST00000562083 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
CCP110-205ENST00000562083 XIRP1Q702N8 1843 aaKnown RBP21.48■■□□□ 1.03
CCP110-205ENST00000562083 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
CCP110-205ENST00000562083 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.03
CCP110-205ENST00000562083 MIA2Q96PC5 1412 aa21.45■■□□□ 1.02
CCP110-205ENST00000562083 CASKIN1Q8WXD9 1431 aa21.44■■□□□ 1.02
CCP110-205ENST00000562083 FAM135AQ9P2D6 1515 aa21.43■■□□□ 1.02
CCP110-205ENST00000562083 ZC3H13Q5T200 1668 aaKnown RBP21.42■■□□□ 1.02
CCP110-205ENST00000562083 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
CCP110-205ENST00000562083 NLRP1Q9C000 1473 aa21.41■■□□□ 1.02
CCP110-205ENST00000562083 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
CCP110-205ENST00000562083 KIF3BO15066 747 aa21.4■■□□□ 1.02
CCP110-205ENST00000562083 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.02
CCP110-205ENST00000562083 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
CCP110-205ENST00000562083 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.02
CCP110-205ENST00000562083 WASHC2CQ9Y4E1 1318 aa21.36■■□□□ 1.01
CCP110-205ENST00000562083 UPF1Q92900 1129 aaKnown RBP eCLIP21.36■■□□□ 1.01
CCP110-205ENST00000562083 FAM135BQ49AJ0 1406 aa21.36■■□□□ 1.01
CCP110-205ENST00000562083 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
CCP110-205ENST00000562083 CCNB3Q8WWL7 1395 aa21.33■■□□□ 1
CCP110-205ENST00000562083 ROBO1Q9Y6N7 1651 aa21.31■■□□□ 1
CCP110-205ENST00000562083 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
CCP110-205ENST00000562083 LTKP29376 864 aa21.29■■□□□ 1
CCP110-205ENST00000562083 CFAP65Q6ZU64 1925 aaKnown RBP21.27■■□□□ 1
CCP110-205ENST00000562083 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
CCP110-205ENST00000562083 UBR1Q8IWV7 1749 aa21.26■□□□□ 0.99
CCP110-205ENST00000562083 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
CCP110-205ENST00000562083 RBM33Q96EV2 1170 aaKnown RBP21.26■□□□□ 0.99
CCP110-205ENST00000562083 SCAF11Q99590 1463 aaKnown RBP21.26■□□□□ 0.99
CCP110-205ENST00000562083 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
CCP110-205ENST00000562083 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
CCP110-205ENST00000562083 TMEM94Q12767 1356 aa21.23■□□□□ 0.99
CCP110-205ENST00000562083 TIAM1Q13009 1591 aa21.23■□□□□ 0.99
CCP110-205ENST00000562083 ERVK-7P63135 1459 aa21.21■□□□□ 0.99
CCP110-205ENST00000562083 TXNDC2Q86VQ3 553 aa21.21■□□□□ 0.99
CCP110-205ENST00000562083 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
CCP110-205ENST00000562083 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
CCP110-205ENST00000562083 ABCC3O15438 1527 aa21.19■□□□□ 0.98
CCP110-205ENST00000562083 PHLPP1O60346 1717 aa21.19■□□□□ 0.98
CCP110-205ENST00000562083 LRP6O75581 1613 aa21.18■□□□□ 0.98
CCP110-205ENST00000562083 SLIT1O75093 1534 aa21.16■□□□□ 0.98
CCP110-205ENST00000562083 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
CCP110-205ENST00000562083 JCADQ9P266 1359 aa21.15■□□□□ 0.98
CCP110-205ENST00000562083 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.98
CCP110-205ENST00000562083 CEP152O94986 1710 aa21.12■□□□□ 0.97
CCP110-205ENST00000562083 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
CCP110-205ENST00000562083 COL16A1Q07092 1604 aaPredicted RBP21.11■□□□□ 0.97
CCP110-205ENST00000562083 MROH1Q8NDA8 1641 aa21.09■□□□□ 0.97
CCP110-205ENST00000562083 KCNA6P17658 529 aa21.09■□□□□ 0.97
CCP110-205ENST00000562083 LRRC9Q6ZRR7 1453 aa21.08■□□□□ 0.97
CCP110-205ENST00000562083 SLAIN2Q9P270 581 aa21.08■□□□□ 0.97
CCP110-205ENST00000562083 CAMSAP2Q08AD1 1489 aa21.07■□□□□ 0.96
CCP110-205ENST00000562083 ZNF772Q68DY9 489 aaPredicted RBP21.07■□□□□ 0.96
CCP110-205ENST00000562083 SLC26A8Q96RN1 970 aa21.07■□□□□ 0.96
CCP110-205ENST00000562083 MEX3CQ5U5Q3 659 aaKnown RBP21.06■□□□□ 0.96
CCP110-205ENST00000562083 EID1Q9Y6B2 187 aa21.06■□□□□ 0.96
CCP110-205ENST00000562083 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
CCP110-205ENST00000562083 PIK3C2BO00750 1634 aa21.05■□□□□ 0.96
CCP110-205ENST00000562083 RXRBP28702 533 aa21.04■□□□□ 0.96
CCP110-205ENST00000562083 TMEM2Q9UHN6 1383 aa21.04■□□□□ 0.96
CCP110-205ENST00000562083 TET3O43151 1660 aa21.03■□□□□ 0.96
CCP110-205ENST00000562083 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
CCP110-205ENST00000562083 MSH6P52701 1360 aa21.01■□□□□ 0.95
CCP110-205ENST00000562083 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
CCP110-205ENST00000562083 SPATA31A6Q5VVP1 1343 aa21.01■□□□□ 0.95
CCP110-205ENST00000562083 NWD1Q149M9 1564 aa21■□□□□ 0.95
CCP110-205ENST00000562083 ARHGEF5Q12774 1597 aa20.98■□□□□ 0.95
CCP110-205ENST00000562083 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
CCP110-205ENST00000562083 NKTRP30414 1462 aaKnown RBP20.98■□□□□ 0.95
CCP110-205ENST00000562083 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
CCP110-205ENST00000562083 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
CCP110-205ENST00000562083 SHPRHQ149N8 1683 aa20.96■□□□□ 0.95
CCP110-205ENST00000562083 TSPY4P0CV99 314 aa20.96■□□□□ 0.95
CCP110-205ENST00000562083 TSPY10P0CW01 314 aa20.96■□□□□ 0.95
CCP110-205ENST00000562083 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
CCP110-205ENST00000562083 KDM5AP29375 1690 aaKnown RBP20.94■□□□□ 0.94
CCP110-205ENST00000562083 RGS12O14924 1447 aa20.94■□□□□ 0.94
CCP110-205ENST00000562083 NUTM2BA6NNL0 878 aaPredicted RBP20.93■□□□□ 0.94
CCP110-205ENST00000562083 NUTM2EB1AL46 878 aaPredicted RBP20.93■□□□□ 0.94
CCP110-205ENST00000562083 NUTM2AQ8IVF1 878 aaPredicted RBP20.93■□□□□ 0.94
CCP110-205ENST00000562083 EFCAB6Q5THR3 1501 aa20.93■□□□□ 0.94
CCP110-205ENST00000562083 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
CCP110-205ENST00000562083 AFF2P51816 1311 aa20.92■□□□□ 0.94
CCP110-205ENST00000562083 ARHGAP31Q2M1Z3 1444 aa20.92■□□□□ 0.94
CCP110-205ENST00000562083 IDI1Q13907 227 aa20.91■□□□□ 0.94
CCP110-205ENST00000562083 EP400Q96L91 3159 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms