RNA–Protein interactions for RNA: ENST00000561449.1

TCF12-226, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-226ENST00000561449 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
TCF12-226ENST00000561449 AGLP35573 1532 aa12.07□□□□□ -0.48
TCF12-226ENST00000561449 ABCC5O15440 1437 aa12.07□□□□□ -0.48
TCF12-226ENST00000561449 DAPK1P53355 1430 aa12.07□□□□□ -0.48
TCF12-226ENST00000561449 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
TCF12-226ENST00000561449 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
TCF12-226ENST00000561449 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
TCF12-226ENST00000561449 RRBP1Q9P2E9 1410 aaKnown RBP12.05□□□□□ -0.48
TCF12-226ENST00000561449 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
TCF12-226ENST00000561449 A2MP01023 1474 aa12.05□□□□□ -0.48
TCF12-226ENST00000561449 CROCC2H7BZ55 1655 aa12.04□□□□□ -0.48
TCF12-226ENST00000561449 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
TCF12-226ENST00000561449 PLXNC1O60486 1568 aa12.04□□□□□ -0.48
TCF12-226ENST00000561449 DHX29Q7Z478 1369 aaKnown RBP12.04□□□□□ -0.48
TCF12-226ENST00000561449 SIGLEC1Q9BZZ2 1709 aa12.03□□□□□ -0.48
TCF12-226ENST00000561449 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
TCF12-226ENST00000561449 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
TCF12-226ENST00000561449 ADGRL2O95490 1459 aa12.01□□□□□ -0.49
TCF12-226ENST00000561449 NCOA1Q15788 1441 aa12□□□□□ -0.49
TCF12-226ENST00000561449 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
TCF12-226ENST00000561449 ROCK1Q13464 1354 aa11.99□□□□□ -0.49
TCF12-226ENST00000561449 KIF15Q9NS87 1388 aa11.99□□□□□ -0.49
TCF12-226ENST00000561449 MLECQ14165 292 aa11.98□□□□□ -0.49
TCF12-226ENST00000561449 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
TCF12-226ENST00000561449 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
TCF12-226ENST00000561449 ERBINQ96RT1 1412 aa11.97□□□□□ -0.49
TCF12-226ENST00000561449 KIF3BO15066 747 aa11.97□□□□□ -0.49
TCF12-226ENST00000561449 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
TCF12-226ENST00000561449 RRP7BPQ9NSQ0 103 aa11.97□□□□□ -0.49
TCF12-226ENST00000561449 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
TCF12-226ENST00000561449 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
TCF12-226ENST00000561449 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.49
TCF12-226ENST00000561449 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
TCF12-226ENST00000561449 FER1L4A9Z1Z3 1794 aa11.95□□□□□ -0.5
TCF12-226ENST00000561449 GGT6Q6P531 493 aa11.95□□□□□ -0.5
TCF12-226ENST00000561449 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
TCF12-226ENST00000561449 PTPRMP28827 1452 aa11.95□□□□□ -0.5
TCF12-226ENST00000561449 ITGAEP38570 1179 aa11.93□□□□□ -0.5
TCF12-226ENST00000561449 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
TCF12-226ENST00000561449 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
TCF12-226ENST00000561449 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
TCF12-226ENST00000561449 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
TCF12-226ENST00000561449 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
TCF12-226ENST00000561449 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
TCF12-226ENST00000561449 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
TCF12-226ENST00000561449 ATF5Q9Y2D1 282 aaPredicted RBP11.89□□□□□ -0.51
TCF12-226ENST00000561449 KDM5DQ9BY66 1539 aa11.89□□□□□ -0.51
TCF12-226ENST00000561449 ZMYM3Q14202 1370 aa11.89□□□□□ -0.51
TCF12-226ENST00000561449 DEPDC5O75140 1603 aa11.89□□□□□ -0.51
TCF12-226ENST00000561449 PRDM15P57071 1507 aaPredicted RBP11.88□□□□□ -0.51
TCF12-226ENST00000561449 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
TCF12-226ENST00000561449 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
TCF12-226ENST00000561449 KANK1Q14678 1352 aa11.88□□□□□ -0.51
TCF12-226ENST00000561449 CLTCQ00610 1675 aaKnown RBP11.87□□□□□ -0.51
TCF12-226ENST00000561449 ZC3H13Q5T200 1668 aaKnown RBP11.87□□□□□ -0.51
TCF12-226ENST00000561449 HFM1A2PYH4 1435 aa11.87□□□□□ -0.51
TCF12-226ENST00000561449 NAIPQ13075 1403 aa11.86□□□□□ -0.51
TCF12-226ENST00000561449 C3P01024 1663 aa11.86□□□□□ -0.51
TCF12-226ENST00000561449 ABCC3O15438 1527 aa11.86□□□□□ -0.51
TCF12-226ENST00000561449 NPATQ14207 1427 aa11.86□□□□□ -0.51
TCF12-226ENST00000561449 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
TCF12-226ENST00000561449 ACIN1Q9UKV3 1341 aaKnown RBP11.85□□□□□ -0.51
TCF12-226ENST00000561449 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
TCF12-226ENST00000561449 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
TCF12-226ENST00000561449 LMTK2Q8IWU2 1503 aa11.84□□□□□ -0.51
TCF12-226ENST00000561449 PZPP20742 1482 aa11.83□□□□□ -0.52
TCF12-226ENST00000561449 ARHGAP31Q2M1Z3 1444 aa11.83□□□□□ -0.52
TCF12-226ENST00000561449 UNC13BO14795 1591 aa11.83□□□□□ -0.52
TCF12-226ENST00000561449 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
TCF12-226ENST00000561449 CEP152O94986 1710 aa11.81□□□□□ -0.52
TCF12-226ENST00000561449 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
TCF12-226ENST00000561449 CAMSAP1Q5T5Y3 1602 aa11.81□□□□□ -0.52
TCF12-226ENST00000561449 NUP155O75694 1391 aa11.79□□□□□ -0.52
TCF12-226ENST00000561449 PREX1Q8TCU6 1659 aa11.79□□□□□ -0.52
TCF12-226ENST00000561449 IQGAP3Q86VI3 1631 aa11.78□□□□□ -0.52
TCF12-226ENST00000561449 UHRF1BP1Q6BDS2 1440 aa11.78□□□□□ -0.52
TCF12-226ENST00000561449 RPRD2Q5VT52 1461 aaKnown RBP11.78□□□□□ -0.52
TCF12-226ENST00000561449 FBXO31Q5XUX0 539 aaPredicted RBP11.78□□□□□ -0.52
TCF12-226ENST00000561449 TNRQ92752 1358 aa11.78□□□□□ -0.52
TCF12-226ENST00000561449 TET3O43151 1660 aa11.78□□□□□ -0.52
TCF12-226ENST00000561449 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.52
TCF12-226ENST00000561449 LMTK3Q96Q04 1460 aa11.77□□□□□ -0.52
TCF12-226ENST00000561449 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.52
TCF12-226ENST00000561449 SPATA31D1Q6ZQQ2 1576 aa11.77□□□□□ -0.53
TCF12-226ENST00000561449 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
TCF12-226ENST00000561449 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
TCF12-226ENST00000561449 HRCP23327 699 aa11.76□□□□□ -0.53
TCF12-226ENST00000561449 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
TCF12-226ENST00000561449 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
TCF12-226ENST00000561449 NOS1P29475 1434 aa11.74□□□□□ -0.53
TCF12-226ENST00000561449 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
TCF12-226ENST00000561449 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
TCF12-226ENST00000561449 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
TCF12-226ENST00000561449 MYO3AQ8NEV4 1616 aa11.73□□□□□ -0.53
TCF12-226ENST00000561449 CEP170BQ9Y4F5 1589 aaPredicted RBP11.72□□□□□ -0.53
TCF12-226ENST00000561449 RAB3GAP2Q9H2M9 1393 aa11.72□□□□□ -0.53
TCF12-226ENST00000561449 SLC52A1Q9NWF4 448 aa11.72□□□□□ -0.53
TCF12-226ENST00000561449 E9PCH4 1651 aa11.71□□□□□ -0.53
TCF12-226ENST00000561449 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
TCF12-226ENST00000561449 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms