RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
IRF9-215ENST00000561415 PZPP20742 1482 aa28.79■■■□□ 2.2
IRF9-215ENST00000561415 NUP155O75694 1391 aa28.77■■■□□ 2.2
IRF9-215ENST00000561415 REREQ9P2R6 1566 aa28.76■■■□□ 2.19
IRF9-215ENST00000561415 ATP10AO60312 1499 aa28.75■■■□□ 2.19
IRF9-215ENST00000561415 IQGAP3Q86VI3 1631 aa28.74■■■□□ 2.19
IRF9-215ENST00000561415 MPHOSPH9Q99550 1183 aa28.74■■■□□ 2.19
IRF9-215ENST00000561415 RNF17Q9BXT8 1623 aaKnown RBP28.74■■■□□ 2.19
IRF9-215ENST00000561415 PRDM15P57071 1507 aaPredicted RBP28.72■■■□□ 2.19
IRF9-215ENST00000561415 FAM135AQ9P2D6 1515 aa28.72■■■□□ 2.19
IRF9-215ENST00000561415 KIF3BO15066 747 aa28.72■■■□□ 2.19
IRF9-215ENST00000561415 MROH1Q8NDA8 1641 aa28.72■■■□□ 2.19
IRF9-215ENST00000561415 SLC4A1APQ9BWU0 796 aaKnown RBP28.7■■■□□ 2.19
IRF9-215ENST00000561415 VWDEQ8N2E2 1590 aa28.67■■■□□ 2.18
IRF9-215ENST00000561415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.66■■■□□ 2.186e-10■■■□□ 17.2
IRF9-215ENST00000561415 AGLP35573 1532 aa28.65■■■□□ 2.18
IRF9-215ENST00000561415 SIGLEC1Q9BZZ2 1709 aa28.62■■■□□ 2.17
IRF9-215ENST00000561415 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
IRF9-215ENST00000561415 KANK1Q14678 1352 aa28.61■■■□□ 2.17
IRF9-215ENST00000561415 PKD2Q13563 968 aa28.58■■■□□ 2.17
IRF9-215ENST00000561415 TET3O43151 1660 aa28.58■■■□□ 2.17
IRF9-215ENST00000561415 FOXD1Q16676 465 aa28.56■■■□□ 2.16
IRF9-215ENST00000561415 LMTK2Q8IWU2 1503 aa28.56■■■□□ 2.16
IRF9-215ENST00000561415 CEP152O94986 1710 aa28.54■■■□□ 2.16
IRF9-215ENST00000561415 ANKRD30BQ9BXX2 1392 aa28.54■■■□□ 2.16
IRF9-215ENST00000561415 GGT6Q6P531 493 aa28.54■■■□□ 2.16
IRF9-215ENST00000561415 ZC3H13Q5T200 1668 aaKnown RBP28.52■■■□□ 2.16
IRF9-215ENST00000561415 E9PCH4 1651 aa28.51■■■□□ 2.16
IRF9-215ENST00000561415 ABCC3O15438 1527 aa28.51■■■□□ 2.15
IRF9-215ENST00000561415 EFCAB6Q5THR3 1501 aa28.5■■■□□ 2.15
IRF9-215ENST00000561415 SIN3AQ96ST3 1273 aa28.47■■■□□ 2.15
IRF9-215ENST00000561415 CAMSAP1Q5T5Y3 1602 aa28.44■■■□□ 2.14
IRF9-215ENST00000561415 WASHC2CQ9Y4E1 1318 aa28.44■■■□□ 2.14
IRF9-215ENST00000561415 PPP6R1Q9UPN7 881 aa28.42■■■□□ 2.14
IRF9-215ENST00000561415 RPRD2Q5VT52 1461 aaKnown RBP28.41■■■□□ 2.14
IRF9-215ENST00000561415 NEUROD1Q13562 356 aa28.4■■■□□ 2.14
IRF9-215ENST00000561415 PLA2R1Q13018 1463 aa28.4■■■□□ 2.14
IRF9-215ENST00000561415 SPHKAPQ2M3C7 1700 aa28.4■■■□□ 2.14
IRF9-215ENST00000561415 ARID4BQ4LE39 1312 aaPredicted RBP28.38■■■□□ 2.13
IRF9-215ENST00000561415 NPATQ14207 1427 aa28.38■■■□□ 2.13
IRF9-215ENST00000561415 PTPRTO14522 1441 aa28.36■■■□□ 2.13
IRF9-215ENST00000561415 ARHGAP31Q2M1Z3 1444 aa28.36■■■□□ 2.13
IRF9-215ENST00000561415 TRPM2O94759 1503 aa28.36■■■□□ 2.13
IRF9-215ENST00000561415 CLTCQ00610 1675 aaKnown RBP28.35■■■□□ 2.13
IRF9-215ENST00000561415 MLECQ14165 292 aa28.34■■■□□ 2.13
IRF9-215ENST00000561415 TIMELESSQ9UNS1 1208 aa28.34■■■□□ 2.13
IRF9-215ENST00000561415 CCDC144AA2RUR9 1427 aa28.32■■■□□ 2.12
IRF9-215ENST00000561415 TONSLQ96HA7 1378 aa28.29■■■□□ 2.12
IRF9-215ENST00000561415 CFAP65Q6ZU64 1925 aaKnown RBP28.28■■■□□ 2.12
IRF9-215ENST00000561415 CNTLNQ9NXG0 1405 aa28.25■■■□□ 2.11
IRF9-215ENST00000561415 CLTCL1P53675 1640 aa28.25■■■□□ 2.11
IRF9-215ENST00000561415 NOS1P29475 1434 aa28.25■■■□□ 2.11
IRF9-215ENST00000561415 MROH2AA6NES4 1674 aa28.24■■■□□ 2.11
IRF9-215ENST00000561415 PREX1Q8TCU6 1659 aa28.24■■■□□ 2.11
IRF9-215ENST00000561415 ESF1Q9H501 851 aaKnown RBP28.23■■■□□ 2.11
IRF9-215ENST00000561415 FER1L4A9Z1Z3 1794 aa28.22■■■□□ 2.11
IRF9-215ENST00000561415 SYNMO15061 1565 aa28.2■■■□□ 2.1
IRF9-215ENST00000561415 UGGT1Q9NYU2 1555 aa28.19■■■□□ 2.1
IRF9-215ENST00000561415 ERVK-7P63135 1459 aa28.18■■■□□ 2.1
IRF9-215ENST00000561415 ZMYM3Q14202 1370 aa28.17■■■□□ 2.1
IRF9-215ENST00000561415 PIK3C2BO00750 1634 aa28.17■■■□□ 2.1
IRF9-215ENST00000561415 L3MBTL2Q969R5 705 aa28.16■■■□□ 2.1
IRF9-215ENST00000561415 SPATA31D1Q6ZQQ2 1576 aa28.16■■■□□ 2.1
IRF9-215ENST00000561415 NEURL4Q96JN8 1562 aa28.14■■■□□ 2.1
IRF9-215ENST00000561415 KIF1BO60333 1816 aa28.14■■■□□ 2.09
IRF9-215ENST00000561415 SPATA31E1Q6ZUB1 1445 aa28.14■■■□□ 2.09
IRF9-215ENST00000561415 PPP1R15AO75807 674 aaPredicted RBP28.13■■■□□ 2.09
IRF9-215ENST00000561415 ADAMTSL3P82987 1691 aa28.13■■■□□ 2.09
IRF9-215ENST00000561415 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
IRF9-215ENST00000561415 FBXO31Q5XUX0 539 aaPredicted RBP28.11■■■□□ 2.09
IRF9-215ENST00000561415 C3P01024 1663 aa28.09■■■□□ 2.09
IRF9-215ENST00000561415 ADGRB3O60242 1522 aa28.08■■■□□ 2.09
IRF9-215ENST00000561415 SLC52A1Q9NWF4 448 aa28.06■■■□□ 2.08
IRF9-215ENST00000561415 RIMS1Q86UR5 1692 aaKnown RBP28.05■■■□□ 2.08
IRF9-215ENST00000561415 RGL3Q3MIN7 710 aa28.03■■■□□ 2.08
IRF9-215ENST00000561415 IDI1Q13907 227 aa28.01■■■□□ 2.07
IRF9-215ENST00000561415 DCAF11Q8TEB1 546 aa27.99■■■□□ 2.07
IRF9-215ENST00000561415 UHRF1BP1Q6BDS2 1440 aa27.98■■■□□ 2.07
IRF9-215ENST00000561415 TMEM131LA2VDJ0 1609 aa27.98■■■□□ 2.07
IRF9-215ENST00000561415 TNRQ92752 1358 aa27.98■■■□□ 2.07
IRF9-215ENST00000561415 IFT172Q9UG01 1749 aa27.97■■■□□ 2.07
IRF9-215ENST00000561415 CEBPAP49715 358 aaPredicted RBP27.96■■■□□ 2.07
IRF9-215ENST00000561415 MYO5BQ9ULV0 1848 aa27.95■■■□□ 2.06
IRF9-215ENST00000561415 CHGAP10645 457 aaKnown RBP27.93■■■□□ 2.06
IRF9-215ENST00000561415 NBPF8Q3BBV2 869 aa27.92■■■□□ 2.06
IRF9-215ENST00000561415 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
IRF9-215ENST00000561415 PPLO60437 1756 aa27.91■■■□□ 2.06
IRF9-215ENST00000561415 STAC3Q96MF2 364 aa27.91■■■□□ 2.06
IRF9-215ENST00000561415 KDM5AP29375 1690 aaKnown RBP27.91■■■□□ 2.06
IRF9-215ENST00000561415 PRAG1Q86YV5 1406 aa27.91■■■□□ 2.06
IRF9-215ENST00000561415 MYOM2P54296 1465 aa27.9■■■□□ 2.06
IRF9-215ENST00000561415 NLRP1Q9C000 1473 aa27.9■■■□□ 2.06
IRF9-215ENST00000561415 ZNF326Q5BKZ1 582 aaKnown RBP27.88■■■□□ 2.05
IRF9-215ENST00000561415 RPGRIP1LQ68CZ1 1315 aa27.88■■■□□ 2.05
IRF9-215ENST00000561415 NEXMIFQ5QGS0 1516 aa27.87■■■□□ 2.05
IRF9-215ENST00000561415 A2ML1A8K2U0 1454 aa27.87■■■□□ 2.05
IRF9-215ENST00000561415 RALGAPBQ86X10 1494 aa27.85■■■□□ 2.05
IRF9-215ENST00000561415 MYO3AQ8NEV4 1616 aa27.85■■■□□ 2.05
IRF9-215ENST00000561415 PTPRMP28827 1452 aa27.84■■■□□ 2.05
IRF9-215ENST00000561415 UBR1Q8IWV7 1749 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms