RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
TM2D3-214ENST00000561356 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
TM2D3-214ENST00000561356 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
TM2D3-214ENST00000561356 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
TM2D3-214ENST00000561356 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
TM2D3-214ENST00000561356 TNRQ92752 1358 aa13.45□□□□□ -0.26
TM2D3-214ENST00000561356 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
TM2D3-214ENST00000561356 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
TM2D3-214ENST00000561356 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
TM2D3-214ENST00000561356 FAM9AQ8IZU1 332 aaPredicted RBP13.44□□□□□ -0.26
TM2D3-214ENST00000561356 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
TM2D3-214ENST00000561356 PRXQ9BXM0 1461 aa13.43□□□□□ -0.26
TM2D3-214ENST00000561356 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
TM2D3-214ENST00000561356 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
TM2D3-214ENST00000561356 NUTM2DQ5VT03 806 aaPredicted RBP13.43□□□□□ -0.26
TM2D3-214ENST00000561356 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
TM2D3-214ENST00000561356 SAMD9LQ8IVG5 1584 aa13.43□□□□□ -0.26
TM2D3-214ENST00000561356 SHPRHQ149N8 1683 aa13.43□□□□□ -0.26
TM2D3-214ENST00000561356 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
TM2D3-214ENST00000561356 KDM5DQ9BY66 1539 aa13.42□□□□□ -0.26
TM2D3-214ENST00000561356 SPATA31A6Q5VVP1 1343 aa13.41□□□□□ -0.26
TM2D3-214ENST00000561356 YY1P25490 414 aa13.41□□□□□ -0.26
TM2D3-214ENST00000561356 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
TM2D3-214ENST00000561356 NHSL1Q5SYE7 1610 aa13.4□□□□□ -0.26
TM2D3-214ENST00000561356 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
TM2D3-214ENST00000561356 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
TM2D3-214ENST00000561356 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
TM2D3-214ENST00000561356 AFF2P51816 1311 aa13.39□□□□□ -0.27
TM2D3-214ENST00000561356 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
TM2D3-214ENST00000561356 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
TM2D3-214ENST00000561356 ADRA2BP18089 450 aa13.39□□□□□ -0.27
TM2D3-214ENST00000561356 PZPP20742 1482 aa13.37□□□□□ -0.27
TM2D3-214ENST00000561356 GGT6Q6P531 493 aa13.37□□□□□ -0.27
TM2D3-214ENST00000561356 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
TM2D3-214ENST00000561356 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
TM2D3-214ENST00000561356 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
TM2D3-214ENST00000561356 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
TM2D3-214ENST00000561356 INO80Q9ULG1 1556 aaPredicted RBP13.35□□□□□ -0.27
TM2D3-214ENST00000561356 A2MP01023 1474 aa13.35□□□□□ -0.27
TM2D3-214ENST00000561356 TIAM1Q13009 1591 aa13.34□□□□□ -0.27
TM2D3-214ENST00000561356 UTRNP46939 3433 aa13.34□□□□□ -0.27
TM2D3-214ENST00000561356 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
TM2D3-214ENST00000561356 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
TM2D3-214ENST00000561356 NWD1Q149M9 1564 aa13.32□□□□□ -0.28
TM2D3-214ENST00000561356 MIA2Q96PC5 1412 aa13.32□□□□□ -0.28
TM2D3-214ENST00000561356 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
TM2D3-214ENST00000561356 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
TM2D3-214ENST00000561356 SCAF11Q99590 1463 aaKnown RBP13.3□□□□□ -0.28
TM2D3-214ENST00000561356 ADGBQ8N7X0 1667 aa13.3□□□□□ -0.28
TM2D3-214ENST00000561356 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
TM2D3-214ENST00000561356 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
TM2D3-214ENST00000561356 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.28
TM2D3-214ENST00000561356 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
TM2D3-214ENST00000561356 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.29
TM2D3-214ENST00000561356 PRDM15P57071 1507 aaPredicted RBP13.27□□□□□ -0.29
TM2D3-214ENST00000561356 LTKP29376 864 aa13.26□□□□□ -0.29
TM2D3-214ENST00000561356 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
TM2D3-214ENST00000561356 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
TM2D3-214ENST00000561356 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
TM2D3-214ENST00000561356 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
TM2D3-214ENST00000561356 HRCP23327 699 aa13.25□□□□□ -0.29
TM2D3-214ENST00000561356 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
TM2D3-214ENST00000561356 ARHGAP23Q9P227 1491 aa13.24□□□□□ -0.29
TM2D3-214ENST00000561356 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
TM2D3-214ENST00000561356 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
TM2D3-214ENST00000561356 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
TM2D3-214ENST00000561356 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
TM2D3-214ENST00000561356 SLIT1O75093 1534 aa13.22□□□□□ -0.29
TM2D3-214ENST00000561356 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
TM2D3-214ENST00000561356 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
TM2D3-214ENST00000561356 MSH6P52701 1360 aa13.2□□□□□ -0.3
TM2D3-214ENST00000561356 ABCC3O15438 1527 aa13.19□□□□□ -0.3
TM2D3-214ENST00000561356 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
TM2D3-214ENST00000561356 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
TM2D3-214ENST00000561356 BLMP54132 1417 aaPredicted RBP13.18□□□□□ -0.3
TM2D3-214ENST00000561356 KCNA6P17658 529 aa13.17□□□□□ -0.3
TM2D3-214ENST00000561356 HNRNPMP52272 730 aaKnown RBP eCLIP13.16□□□□□ -0.3
TM2D3-214ENST00000561356 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
TM2D3-214ENST00000561356 CLIP1P30622 1438 aa13.14□□□□□ -0.31
TM2D3-214ENST00000561356 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
TM2D3-214ENST00000561356 ZNF784Q8NCA9 323 aaPredicted RBP13.14□□□□□ -0.31
TM2D3-214ENST00000561356 ERVK-7P63135 1459 aa13.14□□□□□ -0.31
TM2D3-214ENST00000561356 TET3O43151 1660 aa13.14□□□□□ -0.31
TM2D3-214ENST00000561356 C1QTNF8P60827 252 aa13.13□□□□□ -0.31
TM2D3-214ENST00000561356 ATRNO75882 1429 aa13.13□□□□□ -0.31
TM2D3-214ENST00000561356 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
TM2D3-214ENST00000561356 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
TM2D3-214ENST00000561356 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
TM2D3-214ENST00000561356 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
TM2D3-214ENST00000561356 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
TM2D3-214ENST00000561356 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.09□□□□□ -0.31
TM2D3-214ENST00000561356 WASHC2CQ9Y4E1 1318 aa13.09□□□□□ -0.31
TM2D3-214ENST00000561356 DHX29Q7Z478 1369 aaKnown RBP13.08□□□□□ -0.31
TM2D3-214ENST00000561356 SLC26A8Q96RN1 970 aa13.08□□□□□ -0.32
TM2D3-214ENST00000561356 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
TM2D3-214ENST00000561356 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
TM2D3-214ENST00000561356 KIF3BO15066 747 aa13.07□□□□□ -0.32
TM2D3-214ENST00000561356 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
TM2D3-214ENST00000561356 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
TM2D3-214ENST00000561356 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms