RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 EIF2AK4Q9P2K8 1649 aaKnown RBP21.37■■□□□ 1.01
TPM1-230ENST00000561266 ZMYM3Q14202 1370 aa21.36■■□□□ 1.01
TPM1-230ENST00000561266 CNTLNQ9NXG0 1405 aa21.36■■□□□ 1.01
TPM1-230ENST00000561266 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
TPM1-230ENST00000561266 LMTK3Q96Q04 1460 aa21.35■■□□□ 1.01
TPM1-230ENST00000561266 ITGAEP38570 1179 aa21.35■■□□□ 1.01
TPM1-230ENST00000561266 ESF1Q9H501 851 aaKnown RBP21.35■■□□□ 1.01
TPM1-230ENST00000561266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.35■■□□□ 1.01
TPM1-230ENST00000561266 SETD1BQ9UPS6 1966 aaKnown RBP21.32■■□□□ 1
TPM1-230ENST00000561266 ERBINQ96RT1 1412 aa21.32■■□□□ 1
TPM1-230ENST00000561266 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
TPM1-230ENST00000561266 CEP152O94986 1710 aa21.31■■□□□ 1
TPM1-230ENST00000561266 KDM5DQ9BY66 1539 aa21.3■■□□□ 1
TPM1-230ENST00000561266 PREX1Q8TCU6 1659 aa21.29■■□□□ 1
TPM1-230ENST00000561266 DEPDC5O75140 1603 aa21.29■■□□□ 1
TPM1-230ENST00000561266 ABCC3O15438 1527 aa21.29■■□□□ 1
TPM1-230ENST00000561266 HSPA2P54652 639 aa21.28■■□□□ 1
TPM1-230ENST00000561266 WASHC2CQ9Y4E1 1318 aa21.28■■□□□ 1
TPM1-230ENST00000561266 FBXO31Q5XUX0 539 aaPredicted RBP21.27■■□□□ 1
TPM1-230ENST00000561266 CFAP65Q6ZU64 1925 aaKnown RBP21.26■□□□□ 0.99
TPM1-230ENST00000561266 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
TPM1-230ENST00000561266 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
TPM1-230ENST00000561266 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
TPM1-230ENST00000561266 ANKRD50Q9ULJ7 1429 aa21.24■□□□□ 0.99
TPM1-230ENST00000561266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.991e-6■■■□□ 19
TPM1-230ENST00000561266 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
TPM1-230ENST00000561266 VWDEQ8N2E2 1590 aa21.23■□□□□ 0.99
TPM1-230ENST00000561266 NPATQ14207 1427 aa21.22■□□□□ 0.99
TPM1-230ENST00000561266 CAMSAP1Q5T5Y3 1602 aa21.22■□□□□ 0.99
TPM1-230ENST00000561266 PZPP20742 1482 aa21.21■□□□□ 0.99
TPM1-230ENST00000561266 UHRF1BP1Q6BDS2 1440 aa21.19■□□□□ 0.98
TPM1-230ENST00000561266 MYO3AQ8NEV4 1616 aa21.18■□□□□ 0.98
TPM1-230ENST00000561266 UNC13BO14795 1591 aa21.15■□□□□ 0.98
TPM1-230ENST00000561266 STRCQ7RTU9 1775 aa21.15■□□□□ 0.98
TPM1-230ENST00000561266 ZNF142P52746 1687 aaPredicted RBP21.14■□□□□ 0.97
TPM1-230ENST00000561266 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.97
TPM1-230ENST00000561266 NAIPQ13075 1403 aa21.13■□□□□ 0.97
TPM1-230ENST00000561266 TNRQ92752 1358 aa21.13■□□□□ 0.97
TPM1-230ENST00000561266 SPATA31D1Q6ZQQ2 1576 aa21.13■□□□□ 0.97
TPM1-230ENST00000561266 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
TPM1-230ENST00000561266 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
TPM1-230ENST00000561266 CEP170BQ9Y4F5 1589 aaPredicted RBP21.11■□□□□ 0.97
TPM1-230ENST00000561266 ARHGAP31Q2M1Z3 1444 aa21.11■□□□□ 0.97
TPM1-230ENST00000561266 KANK1Q14678 1352 aa21.1■□□□□ 0.97
TPM1-230ENST00000561266 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.96
TPM1-230ENST00000561266 A2ML1A8K2U0 1454 aa21.07■□□□□ 0.96
TPM1-230ENST00000561266 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
TPM1-230ENST00000561266 TET3O43151 1660 aa21.06■□□□□ 0.96
TPM1-230ENST00000561266 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
TPM1-230ENST00000561266 NUP155O75694 1391 aa21.04■□□□□ 0.96
TPM1-230ENST00000561266 SYNMO15061 1565 aa21.04■□□□□ 0.96
TPM1-230ENST00000561266 E9PCH4 1651 aa21.04■□□□□ 0.96
TPM1-230ENST00000561266 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
TPM1-230ENST00000561266 NOS1P29475 1434 aa21.01■□□□□ 0.95
TPM1-230ENST00000561266 NCKAP5LQ9HCH0 1330 aa21.01■□□□□ 0.95
TPM1-230ENST00000561266 UBR1Q8IWV7 1749 aa20.99■□□□□ 0.95
TPM1-230ENST00000561266 UGGT1Q9NYU2 1555 aa20.98■□□□□ 0.95
TPM1-230ENST00000561266 PIK3C2BO00750 1634 aa20.98■□□□□ 0.95
TPM1-230ENST00000561266 IDI1Q13907 227 aa20.96■□□□□ 0.95
TPM1-230ENST00000561266 PLA2R1Q13018 1463 aa20.95■□□□□ 0.94
TPM1-230ENST00000561266 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
TPM1-230ENST00000561266 NEURL4Q96JN8 1562 aa20.93■□□□□ 0.94
TPM1-230ENST00000561266 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
TPM1-230ENST00000561266 POLR1AO95602 1720 aaPredicted RBP20.92■□□□□ 0.94
TPM1-230ENST00000561266 THEMISQ8N1K5 641 aaPredicted RBP20.91■□□□□ 0.94
TPM1-230ENST00000561266 PTPRTO14522 1441 aa20.9■□□□□ 0.94
TPM1-230ENST00000561266 TRIM52Q96A61 297 aa20.9■□□□□ 0.94
TPM1-230ENST00000561266 SETD5Q9C0A6 1442 aa20.88■□□□□ 0.93
TPM1-230ENST00000561266 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
TPM1-230ENST00000561266 PKD2Q13563 968 aa20.87■□□□□ 0.93
TPM1-230ENST00000561266 ARHGAP23Q9P227 1491 aa20.87■□□□□ 0.93
TPM1-230ENST00000561266 LTKP29376 864 aa20.86■□□□□ 0.93
TPM1-230ENST00000561266 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
TPM1-230ENST00000561266 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
TPM1-230ENST00000561266 TMEM131LA2VDJ0 1609 aa20.85■□□□□ 0.93
TPM1-230ENST00000561266 ADGRB3O60242 1522 aa20.84■□□□□ 0.93
TPM1-230ENST00000561266 SLIT1O75093 1534 aa20.84■□□□□ 0.93
TPM1-230ENST00000561266 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
TPM1-230ENST00000561266 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
TPM1-230ENST00000561266 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
TPM1-230ENST00000561266 FOXD1Q16676 465 aa20.83■□□□□ 0.93
TPM1-230ENST00000561266 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
TPM1-230ENST00000561266 TMEM2Q9UHN6 1383 aa20.81■□□□□ 0.92
TPM1-230ENST00000561266 MED14O60244 1454 aa20.81■□□□□ 0.92
TPM1-230ENST00000561266 CLTCL1P53675 1640 aa20.8■□□□□ 0.92
TPM1-230ENST00000561266 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
TPM1-230ENST00000561266 NPHP4O75161 1426 aaPredicted RBP20.79■□□□□ 0.92
TPM1-230ENST00000561266 LTBP4Q8N2S1 1624 aa20.79■□□□□ 0.92
TPM1-230ENST00000561266 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
TPM1-230ENST00000561266 SCAF11Q99590 1463 aaKnown RBP20.79■□□□□ 0.92
TPM1-230ENST00000561266 IQGAP1P46940 1657 aa20.79■□□□□ 0.92
TPM1-230ENST00000561266 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
TPM1-230ENST00000561266 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
TPM1-230ENST00000561266 TRPM2O94759 1503 aa20.77■□□□□ 0.92
TPM1-230ENST00000561266 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
TPM1-230ENST00000561266 ZFYVE9O95405 1425 aa20.76■□□□□ 0.91
TPM1-230ENST00000561266 STRCP1A6NGW2 1772 aa20.74■□□□□ 0.91
TPM1-230ENST00000561266 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
TPM1-230ENST00000561266 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
TPM1-230ENST00000561266 NUTM2DQ5VT03 806 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms