RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ZNF142P52746 1687 aaPredicted RBP19.84■□□□□ 0.77
CHRNA3-208ENST00000561128 ESF1Q9H501 851 aaKnown RBP19.84■□□□□ 0.77
CHRNA3-208ENST00000561128 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
CHRNA3-208ENST00000561128 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
CHRNA3-208ENST00000561128 CEP152O94986 1710 aa19.82■□□□□ 0.76
CHRNA3-208ENST00000561128 ABCC3O15438 1527 aa19.81■□□□□ 0.76
CHRNA3-208ENST00000561128 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
CHRNA3-208ENST00000561128 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
CHRNA3-208ENST00000561128 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
CHRNA3-208ENST00000561128 CEP170BQ9Y4F5 1589 aaPredicted RBP19.8■□□□□ 0.76
CHRNA3-208ENST00000561128 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
CHRNA3-208ENST00000561128 PZPP20742 1482 aa19.79■□□□□ 0.76
CHRNA3-208ENST00000561128 PPARGC1BQ86YN6 1023 aaKnown RBP19.78■□□□□ 0.76
CHRNA3-208ENST00000561128 ZC3H13Q5T200 1668 aaKnown RBP19.78■□□□□ 0.76
CHRNA3-208ENST00000561128 PRDM15P57071 1507 aaPredicted RBP19.77■□□□□ 0.76
CHRNA3-208ENST00000561128 CAMSAP1Q5T5Y3 1602 aa19.77■□□□□ 0.76
CHRNA3-208ENST00000561128 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
CHRNA3-208ENST00000561128 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
CHRNA3-208ENST00000561128 FBXO31Q5XUX0 539 aaPredicted RBP19.76■□□□□ 0.75
CHRNA3-208ENST00000561128 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
CHRNA3-208ENST00000561128 ADGRL2O95490 1459 aa19.74■□□□□ 0.75
CHRNA3-208ENST00000561128 RRP7BPQ9NSQ0 103 aa19.74■□□□□ 0.75
CHRNA3-208ENST00000561128 CHIC2Q9UKJ5 165 aa19.74■□□□□ 0.75
CHRNA3-208ENST00000561128 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
CHRNA3-208ENST00000561128 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
CHRNA3-208ENST00000561128 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
CHRNA3-208ENST00000561128 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
CHRNA3-208ENST00000561128 TNRQ92752 1358 aa19.7■□□□□ 0.74
CHRNA3-208ENST00000561128 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
CHRNA3-208ENST00000561128 A2ML1A8K2U0 1454 aa19.7■□□□□ 0.74
CHRNA3-208ENST00000561128 VWDEQ8N2E2 1590 aa19.69■□□□□ 0.74
CHRNA3-208ENST00000561128 ERVK-7P63135 1459 aa19.68■□□□□ 0.74
CHRNA3-208ENST00000561128 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
CHRNA3-208ENST00000561128 PLA2R1Q13018 1463 aa19.66■□□□□ 0.74
CHRNA3-208ENST00000561128 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
CHRNA3-208ENST00000561128 PTPRTO14522 1441 aa19.65■□□□□ 0.74
CHRNA3-208ENST00000561128 NCKAP5LQ9HCH0 1330 aa19.64■□□□□ 0.73
CHRNA3-208ENST00000561128 POLR1AO95602 1720 aaPredicted RBP19.62■□□□□ 0.73
CHRNA3-208ENST00000561128 LTBP4Q8N2S1 1624 aa19.62■□□□□ 0.73
CHRNA3-208ENST00000561128 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
CHRNA3-208ENST00000561128 CFAP65Q6ZU64 1925 aaKnown RBP19.61■□□□□ 0.73
CHRNA3-208ENST00000561128 NLRP1Q9C000 1473 aa19.6■□□□□ 0.73
CHRNA3-208ENST00000561128 UNC13BO14795 1591 aa19.59■□□□□ 0.73
CHRNA3-208ENST00000561128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.73
CHRNA3-208ENST00000561128 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
CHRNA3-208ENST00000561128 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
CHRNA3-208ENST00000561128 SYNMO15061 1565 aa19.58■□□□□ 0.73
CHRNA3-208ENST00000561128 UGGT1Q9NYU2 1555 aa19.58■□□□□ 0.73
CHRNA3-208ENST00000561128 UBR1Q8IWV7 1749 aa19.58■□□□□ 0.72
CHRNA3-208ENST00000561128 ARHGAP31Q2M1Z3 1444 aa19.58■□□□□ 0.72
CHRNA3-208ENST00000561128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHRNA3-208ENST00000561128 PIK3C2BO00750 1634 aa19.55■□□□□ 0.72
CHRNA3-208ENST00000561128 RRBP1Q9P2E9 1410 aaKnown RBP19.55■□□□□ 0.72
CHRNA3-208ENST00000561128 CERKQ8TCT0 537 aa19.54■□□□□ 0.72
CHRNA3-208ENST00000561128 ITGAEP38570 1179 aa19.53■□□□□ 0.72
CHRNA3-208ENST00000561128 FBXO41Q8TF61 875 aa19.53■□□□□ 0.72
CHRNA3-208ENST00000561128 ROCK1Q13464 1354 aa19.53■□□□□ 0.72
CHRNA3-208ENST00000561128 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.72
CHRNA3-208ENST00000561128 TET3O43151 1660 aa19.52■□□□□ 0.71
CHRNA3-208ENST00000561128 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
CHRNA3-208ENST00000561128 KANK1Q14678 1352 aa19.5■□□□□ 0.71
CHRNA3-208ENST00000561128 PKD2Q13563 968 aa19.49■□□□□ 0.71
CHRNA3-208ENST00000561128 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
CHRNA3-208ENST00000561128 NOS1P29475 1434 aa19.49■□□□□ 0.71
CHRNA3-208ENST00000561128 E9PCH4 1651 aa19.49■□□□□ 0.71
CHRNA3-208ENST00000561128 GCC2Q8IWJ2 1684 aa19.49■□□□□ 0.71
CHRNA3-208ENST00000561128 IQGAP1P46940 1657 aa19.47■□□□□ 0.71
CHRNA3-208ENST00000561128 MED14O60244 1454 aa19.46■□□□□ 0.71
CHRNA3-208ENST00000561128 ARHGAP23Q9P227 1491 aa19.46■□□□□ 0.71
CHRNA3-208ENST00000561128 SLIT1O75093 1534 aa19.45■□□□□ 0.7
CHRNA3-208ENST00000561128 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-208ENST00000561128 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
CHRNA3-208ENST00000561128 ADGRB3O60242 1522 aa19.43■□□□□ 0.7
CHRNA3-208ENST00000561128 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
CHRNA3-208ENST00000561128 KDM5AP29375 1690 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-208ENST00000561128 THEMISQ8N1K5 641 aaPredicted RBP19.41■□□□□ 0.7
CHRNA3-208ENST00000561128 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-208ENST00000561128 SCAF11Q99590 1463 aaKnown RBP19.41■□□□□ 0.7
CHRNA3-208ENST00000561128 NAIPQ13075 1403 aa19.4■□□□□ 0.7
CHRNA3-208ENST00000561128 LTKP29376 864 aa19.39■□□□□ 0.69
CHRNA3-208ENST00000561128 IDI1Q13907 227 aa19.39■□□□□ 0.69
CHRNA3-208ENST00000561128 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
CHRNA3-208ENST00000561128 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
CHRNA3-208ENST00000561128 IQSEC2Q5JU85 1478 aa19.36■□□□□ 0.69
CHRNA3-208ENST00000561128 TMEM2Q9UHN6 1383 aa19.35■□□□□ 0.69
CHRNA3-208ENST00000561128 NUP155O75694 1391 aa19.34■□□□□ 0.69
CHRNA3-208ENST00000561128 ALKQ9UM73 1620 aa19.33■□□□□ 0.68
CHRNA3-208ENST00000561128 HFM1A2PYH4 1435 aa19.32■□□□□ 0.68
CHRNA3-208ENST00000561128 SPHKAPQ2M3C7 1700 aa19.31■□□□□ 0.68
CHRNA3-208ENST00000561128 CPS1P31327 1500 aa19.31■□□□□ 0.68
CHRNA3-208ENST00000561128 ZFYVE9O95405 1425 aa19.31■□□□□ 0.68
CHRNA3-208ENST00000561128 TXNDC2Q86VQ3 553 aa19.29■□□□□ 0.68
CHRNA3-208ENST00000561128 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
CHRNA3-208ENST00000561128 CLTCL1P53675 1640 aa19.27■□□□□ 0.68
CHRNA3-208ENST00000561128 LRRC7Q96NW7 1537 aa19.26■□□□□ 0.67
CHRNA3-208ENST00000561128 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
CHRNA3-208ENST00000561128 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
CHRNA3-208ENST00000561128 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
CHRNA3-208ENST00000561128 SLC52A1Q9NWF4 448 aa19.24■□□□□ 0.67
CHRNA3-208ENST00000561128 TRPM2O94759 1503 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms