RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 FBXO41Q8TF61 875 aa19.8■□□□□ 0.76
CSHL1-209ENST00000560999 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
CSHL1-209ENST00000560999 SHANK2Q9UPX8 1470 aa19.79■□□□□ 0.76
CSHL1-209ENST00000560999 ZMYM3Q14202 1370 aa19.78■□□□□ 0.76
CSHL1-209ENST00000560999 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
CSHL1-209ENST00000560999 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
CSHL1-209ENST00000560999 ROCK1Q13464 1354 aa19.77■□□□□ 0.76
CSHL1-209ENST00000560999 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
CSHL1-209ENST00000560999 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
CSHL1-209ENST00000560999 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
CSHL1-209ENST00000560999 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
CSHL1-209ENST00000560999 ADGRL2O95490 1459 aa19.75■□□□□ 0.75
CSHL1-209ENST00000560999 MAST1Q9Y2H9 1570 aa19.75■□□□□ 0.75
CSHL1-209ENST00000560999 NPATQ14207 1427 aa19.73■□□□□ 0.75
CSHL1-209ENST00000560999 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
CSHL1-209ENST00000560999 NAIPQ13075 1403 aa19.72■□□□□ 0.75
CSHL1-209ENST00000560999 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
CSHL1-209ENST00000560999 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
CSHL1-209ENST00000560999 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
CSHL1-209ENST00000560999 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
CSHL1-209ENST00000560999 NCOA1Q15788 1441 aa19.7■□□□□ 0.74
CSHL1-209ENST00000560999 ZNF142P52746 1687 aaPredicted RBP19.7■□□□□ 0.74
CSHL1-209ENST00000560999 KIF3BO15066 747 aa19.69■□□□□ 0.74
CSHL1-209ENST00000560999 CERKQ8TCT0 537 aa19.69■□□□□ 0.74
CSHL1-209ENST00000560999 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
CSHL1-209ENST00000560999 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
CSHL1-209ENST00000560999 ANKRD30AQ9BXX3 1397 aa19.68■□□□□ 0.74
CSHL1-209ENST00000560999 KDM5DQ9BY66 1539 aa19.66■□□□□ 0.74
CSHL1-209ENST00000560999 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
CSHL1-209ENST00000560999 PTPRTO14522 1441 aa19.64■□□□□ 0.74
CSHL1-209ENST00000560999 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
CSHL1-209ENST00000560999 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
CSHL1-209ENST00000560999 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
CSHL1-209ENST00000560999 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
CSHL1-209ENST00000560999 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
CSHL1-209ENST00000560999 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
CSHL1-209ENST00000560999 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
CSHL1-209ENST00000560999 PZPP20742 1482 aa19.59■□□□□ 0.73
CSHL1-209ENST00000560999 MROH1Q8NDA8 1641 aa19.59■□□□□ 0.73
CSHL1-209ENST00000560999 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
CSHL1-209ENST00000560999 WASHC2CQ9Y4E1 1318 aa19.58■□□□□ 0.73
CSHL1-209ENST00000560999 A2ML1A8K2U0 1454 aa19.58■□□□□ 0.73
CSHL1-209ENST00000560999 FAM135AQ9P2D6 1515 aa19.57■□□□□ 0.72
CSHL1-209ENST00000560999 TNRQ92752 1358 aa19.57■□□□□ 0.72
CSHL1-209ENST00000560999 EIF2AK4Q9P2K8 1649 aaKnown RBP19.57■□□□□ 0.72
CSHL1-209ENST00000560999 CEP152O94986 1710 aa19.57■□□□□ 0.72
CSHL1-209ENST00000560999 ABCC3O15438 1527 aa19.56■□□□□ 0.72
CSHL1-209ENST00000560999 PLA2R1Q13018 1463 aa19.56■□□□□ 0.72
CSHL1-209ENST00000560999 ANKRD50Q9ULJ7 1429 aa19.56■□□□□ 0.72
CSHL1-209ENST00000560999 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
CSHL1-209ENST00000560999 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
CSHL1-209ENST00000560999 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
CSHL1-209ENST00000560999 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.72
CSHL1-209ENST00000560999 POLR1AO95602 1720 aaPredicted RBP19.51■□□□□ 0.71
CSHL1-209ENST00000560999 NEURL4Q96JN8 1562 aa19.51■□□□□ 0.71
CSHL1-209ENST00000560999 ERBINQ96RT1 1412 aa19.5■□□□□ 0.71
CSHL1-209ENST00000560999 PKD2Q13563 968 aa19.47■□□□□ 0.71
CSHL1-209ENST00000560999 SPATA31D1Q6ZQQ2 1576 aa19.47■□□□□ 0.71
CSHL1-209ENST00000560999 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
CSHL1-209ENST00000560999 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
CSHL1-209ENST00000560999 CFAP65Q6ZU64 1925 aaKnown RBP19.46■□□□□ 0.71
CSHL1-209ENST00000560999 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
CSHL1-209ENST00000560999 UNC13BO14795 1591 aa19.46■□□□□ 0.7
CSHL1-209ENST00000560999 NLRP1Q9C000 1473 aa19.45■□□□□ 0.7
CSHL1-209ENST00000560999 DEPDC5O75140 1603 aa19.44■□□□□ 0.7
CSHL1-209ENST00000560999 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
CSHL1-209ENST00000560999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
CSHL1-209ENST00000560999 IQSEC2Q5JU85 1478 aa19.4■□□□□ 0.7
CSHL1-209ENST00000560999 UBR1Q8IWV7 1749 aa19.39■□□□□ 0.69
CSHL1-209ENST00000560999 IQGAP3Q86VI3 1631 aa19.37■□□□□ 0.69
CSHL1-209ENST00000560999 MPHOSPH9Q99550 1183 aa19.37■□□□□ 0.69
CSHL1-209ENST00000560999 NUP155O75694 1391 aa19.37■□□□□ 0.69
CSHL1-209ENST00000560999 THEMISQ8N1K5 641 aaPredicted RBP19.36■□□□□ 0.69
CSHL1-209ENST00000560999 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
CSHL1-209ENST00000560999 ANKLE2Q86XL3 938 aa19.36■□□□□ 0.69
CSHL1-209ENST00000560999 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
CSHL1-209ENST00000560999 VWDEQ8N2E2 1590 aa19.35■□□□□ 0.69
CSHL1-209ENST00000560999 PIK3C2BO00750 1634 aa19.34■□□□□ 0.69
CSHL1-209ENST00000560999 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.69
CSHL1-209ENST00000560999 SLC4A1APQ9BWU0 796 aaKnown RBP19.33■□□□□ 0.69
CSHL1-209ENST00000560999 MED14O60244 1454 aa19.33■□□□□ 0.68
CSHL1-209ENST00000560999 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.68
CSHL1-209ENST00000560999 UBAP1LF5GYI3 381 aa19.32■□□□□ 0.68
CSHL1-209ENST00000560999 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
CSHL1-209ENST00000560999 KANK1Q14678 1352 aa19.31■□□□□ 0.68
CSHL1-209ENST00000560999 STRCP1A6NGW2 1772 aa19.31■□□□□ 0.68
CSHL1-209ENST00000560999 SYNMO15061 1565 aa19.3■□□□□ 0.68
CSHL1-209ENST00000560999 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
CSHL1-209ENST00000560999 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
CSHL1-209ENST00000560999 CPS1P31327 1500 aa19.29■□□□□ 0.68
CSHL1-209ENST00000560999 SCAF11Q99590 1463 aaKnown RBP19.27■□□□□ 0.68
CSHL1-209ENST00000560999 ARHGAP23Q9P227 1491 aa19.26■□□□□ 0.67
CSHL1-209ENST00000560999 TET3O43151 1660 aa19.26■□□□□ 0.67
CSHL1-209ENST00000560999 LTKP29376 864 aa19.25■□□□□ 0.67
CSHL1-209ENST00000560999 SLIT1O75093 1534 aa19.25■□□□□ 0.67
CSHL1-209ENST00000560999 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
CSHL1-209ENST00000560999 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
CSHL1-209ENST00000560999 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
CSHL1-209ENST00000560999 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
CSHL1-209ENST00000560999 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms