RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 PTPRKQ15262 1439 aa10.8□□□□□ -0.68
CTDSPL2-210ENST00000560834 ADGRL2O95490 1459 aa10.8□□□□□ -0.68
CTDSPL2-210ENST00000560834 MLH3Q9UHC1 1453 aa10.8□□□□□ -0.68
CTDSPL2-210ENST00000560834 GCC2Q8IWJ2 1684 aa10.79□□□□□ -0.68
CTDSPL2-210ENST00000560834 SIGLEC1Q9BZZ2 1709 aa10.79□□□□□ -0.68
CTDSPL2-210ENST00000560834 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
CTDSPL2-210ENST00000560834 HNRNPMP52272 730 aaKnown RBP eCLIP10.79□□□□□ -0.681e-7■■■■■ 28.3
CTDSPL2-210ENST00000560834 FAM50AQ14320 339 aaKnown RBP10.78□□□□□ -0.68
CTDSPL2-210ENST00000560834 MAGI2Q86UL8 1455 aa10.78□□□□□ -0.68
CTDSPL2-210ENST00000560834 REREQ9P2R6 1566 aa10.77□□□□□ -0.68
CTDSPL2-210ENST00000560834 RTEL1-TNFRSF6BF6WH68 1400 aa10.77□□□□□ -0.68
CTDSPL2-210ENST00000560834 YEATS2Q9ULM3 1422 aa10.77□□□□□ -0.68
CTDSPL2-210ENST00000560834 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
CTDSPL2-210ENST00000560834 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
CTDSPL2-210ENST00000560834 AFAP1Q8N556 730 aa10.76□□□□□ -0.69
CTDSPL2-210ENST00000560834 BCORL1Q5H9F3 1711 aa10.75□□□□□ -0.69
CTDSPL2-210ENST00000560834 EIF2AK4Q9P2K8 1649 aaKnown RBP10.74□□□□□ -0.69
CTDSPL2-210ENST00000560834 EVX2Q03828 476 aa10.74□□□□□ -0.69
CTDSPL2-210ENST00000560834 RSPH4AQ5TD94 716 aa10.73□□□□□ -0.69
CTDSPL2-210ENST00000560834 SPAG9O60271 1321 aaKnown RBP10.73□□□□□ -0.69
CTDSPL2-210ENST00000560834 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
CTDSPL2-210ENST00000560834 DUOX2Q9NRD8 1548 aa10.73□□□□□ -0.69
CTDSPL2-210ENST00000560834 NCOA1Q15788 1441 aa10.72□□□□□ -0.69
CTDSPL2-210ENST00000560834 DEPDC5O75140 1603 aa10.71□□□□□ -0.69
CTDSPL2-210ENST00000560834 A2MP01023 1474 aa10.71□□□□□ -0.69
CTDSPL2-210ENST00000560834 RNF17Q9BXT8 1623 aaKnown RBP10.71□□□□□ -0.69
CTDSPL2-210ENST00000560834 MROH1Q8NDA8 1641 aa10.7□□□□□ -0.7
CTDSPL2-210ENST00000560834 AGLP35573 1532 aa10.7□□□□□ -0.7
CTDSPL2-210ENST00000560834 ATP10AO60312 1499 aa10.7□□□□□ -0.7
CTDSPL2-210ENST00000560834 HFM1A2PYH4 1435 aa10.7□□□□□ -0.7
CTDSPL2-210ENST00000560834 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
CTDSPL2-210ENST00000560834 UNC13BO14795 1591 aa10.69□□□□□ -0.7
CTDSPL2-210ENST00000560834 NAIPQ13075 1403 aa10.69□□□□□ -0.7
CTDSPL2-210ENST00000560834 ERBINQ96RT1 1412 aa10.69□□□□□ -0.7
CTDSPL2-210ENST00000560834 ANKRD30AQ9BXX3 1397 aa10.69□□□□□ -0.7
CTDSPL2-210ENST00000560834 ITGAEP38570 1179 aa10.69□□□□□ -0.7
CTDSPL2-210ENST00000560834 TSPY4P0CV99 314 aa10.68□□□□□ -0.7
CTDSPL2-210ENST00000560834 TSPY10P0CW01 314 aa10.68□□□□□ -0.7
CTDSPL2-210ENST00000560834 PRDM15P57071 1507 aaPredicted RBP10.68□□□□□ -0.7
CTDSPL2-210ENST00000560834 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
CTDSPL2-210ENST00000560834 CHIC2Q9UKJ5 165 aa10.67□□□□□ -0.7
CTDSPL2-210ENST00000560834 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-210ENST00000560834 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL2-210ENST00000560834 ZC3H13Q5T200 1668 aaKnown RBP10.65□□□□□ -0.7
CTDSPL2-210ENST00000560834 ANKRD50Q9ULJ7 1429 aa10.65□□□□□ -0.7
CTDSPL2-210ENST00000560834 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-210ENST00000560834 RRP7BPQ9NSQ0 103 aa10.64□□□□□ -0.71
CTDSPL2-210ENST00000560834 VWDEQ8N2E2 1590 aa10.64□□□□□ -0.71
CTDSPL2-210ENST00000560834 CEP152O94986 1710 aa10.64□□□□□ -0.71
CTDSPL2-210ENST00000560834 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
CTDSPL2-210ENST00000560834 ADAMTSL3P82987 1691 aa10.63□□□□□ -0.71
CTDSPL2-210ENST00000560834 IQGAP3Q86VI3 1631 aa10.63□□□□□ -0.71
CTDSPL2-210ENST00000560834 FER1L4A9Z1Z3 1794 aa10.63□□□□□ -0.71
CTDSPL2-210ENST00000560834 MYT1LQ9UL68 1186 aa10.63□□□□□ -0.71
CTDSPL2-210ENST00000560834 FAM135AQ9P2D6 1515 aa10.63□□□□□ -0.71
CTDSPL2-210ENST00000560834 MADDQ8WXG6 1647 aa10.62□□□□□ -0.71
CTDSPL2-210ENST00000560834 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
CTDSPL2-210ENST00000560834 CLTCQ00610 1675 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-210ENST00000560834 MROH2AA6NES4 1674 aa10.6□□□□□ -0.71
CTDSPL2-210ENST00000560834 ABCC3O15438 1527 aa10.6□□□□□ -0.71
CTDSPL2-210ENST00000560834 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
CTDSPL2-210ENST00000560834 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
CTDSPL2-210ENST00000560834 LMTK2Q8IWU2 1503 aa10.59□□□□□ -0.71
CTDSPL2-210ENST00000560834 TET3O43151 1660 aa10.59□□□□□ -0.71
CTDSPL2-210ENST00000560834 RIMS1Q86UR5 1692 aaKnown RBP10.59□□□□□ -0.71
CTDSPL2-210ENST00000560834 EFCAB6Q5THR3 1501 aa10.58□□□□□ -0.72
CTDSPL2-210ENST00000560834 FKBP8Q14318 412 aa10.58□□□□□ -0.72
CTDSPL2-210ENST00000560834 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
CTDSPL2-210ENST00000560834 PZPP20742 1482 aa10.57□□□□□ -0.72
CTDSPL2-210ENST00000560834 ATF5Q9Y2D1 282 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL2-210ENST00000560834 KIF3BO15066 747 aa10.56□□□□□ -0.72
CTDSPL2-210ENST00000560834 E9PCH4 1651 aa10.56□□□□□ -0.72
CTDSPL2-210ENST00000560834 C3P01024 1663 aa10.56□□□□□ -0.72
CTDSPL2-210ENST00000560834 POLA2Q14181 598 aa10.55□□□□□ -0.72
CTDSPL2-210ENST00000560834 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
CTDSPL2-210ENST00000560834 PREX1Q8TCU6 1659 aa10.53□□□□□ -0.72
CTDSPL2-210ENST00000560834 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
CTDSPL2-210ENST00000560834 ARID4BQ4LE39 1312 aaPredicted RBP10.53□□□□□ -0.72
CTDSPL2-210ENST00000560834 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
CTDSPL2-210ENST00000560834 CNTLNQ9NXG0 1405 aa10.52□□□□□ -0.73
CTDSPL2-210ENST00000560834 MLECQ14165 292 aa10.51□□□□□ -0.73
CTDSPL2-210ENST00000560834 GGT6Q6P531 493 aa10.51□□□□□ -0.73
CTDSPL2-210ENST00000560834 SPATA31D1Q6ZQQ2 1576 aa10.51□□□□□ -0.73
CTDSPL2-210ENST00000560834 NUP155O75694 1391 aa10.51□□□□□ -0.73
CTDSPL2-210ENST00000560834 KANK1Q14678 1352 aa10.51□□□□□ -0.73
CTDSPL2-210ENST00000560834 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
CTDSPL2-210ENST00000560834 GABBR2O75899 941 aa10.5□□□□□ -0.73
CTDSPL2-210ENST00000560834 AMER1Q5JTC6 1135 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL2-210ENST00000560834 SYNMO15061 1565 aa10.5□□□□□ -0.73
CTDSPL2-210ENST00000560834 NPATQ14207 1427 aa10.5□□□□□ -0.73
CTDSPL2-210ENST00000560834 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-210ENST00000560834 HRCP23327 699 aa10.49□□□□□ -0.73
CTDSPL2-210ENST00000560834 PTPRMP28827 1452 aa10.49□□□□□ -0.73
CTDSPL2-210ENST00000560834 ERVK-7P63135 1459 aa10.49□□□□□ -0.73
CTDSPL2-210ENST00000560834 PIK3C2BO00750 1634 aa10.48□□□□□ -0.73
CTDSPL2-210ENST00000560834 MYO3AQ8NEV4 1616 aa10.48□□□□□ -0.73
CTDSPL2-210ENST00000560834 TRPM2O94759 1503 aa10.48□□□□□ -0.73
CTDSPL2-210ENST00000560834 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-210ENST00000560834 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-210ENST00000560834 KDM4FA0A1W2PPD8 638 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms