RNA–Protein interactions for RNA: ENST00000560816.5

ETFA-217, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-217ENST00000560816 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
ETFA-217ENST00000560816 REREQ9P2R6 1566 aa11.34□□□□□ -0.59
ETFA-217ENST00000560816 KIF3BO15066 747 aa11.33□□□□□ -0.6
ETFA-217ENST00000560816 EIF2AK4Q9P2K8 1649 aaKnown RBP11.32□□□□□ -0.6
ETFA-217ENST00000560816 AGLP35573 1532 aa11.32□□□□□ -0.6
ETFA-217ENST00000560816 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
ETFA-217ENST00000560816 NUP155O75694 1391 aa11.3□□□□□ -0.6
ETFA-217ENST00000560816 UNC13BO14795 1591 aa11.3□□□□□ -0.6
ETFA-217ENST00000560816 KCNA4P22459 653 aa11.3□□□□□ -0.6
ETFA-217ENST00000560816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.6
ETFA-217ENST00000560816 KANK1Q14678 1352 aa11.29□□□□□ -0.6
ETFA-217ENST00000560816 ARID4BQ4LE39 1312 aaPredicted RBP11.29□□□□□ -0.6
ETFA-217ENST00000560816 KDM5DQ9BY66 1539 aa11.29□□□□□ -0.6
ETFA-217ENST00000560816 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
ETFA-217ENST00000560816 PZPP20742 1482 aa11.28□□□□□ -0.6
ETFA-217ENST00000560816 GGT6Q6P531 493 aa11.28□□□□□ -0.6
ETFA-217ENST00000560816 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
ETFA-217ENST00000560816 PRDM15P57071 1507 aaPredicted RBP11.28□□□□□ -0.6
ETFA-217ENST00000560816 DEPDC5O75140 1603 aa11.27□□□□□ -0.6
ETFA-217ENST00000560816 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.6
ETFA-217ENST00000560816 RNF17Q9BXT8 1623 aaKnown RBP11.27□□□□□ -0.6
ETFA-217ENST00000560816 MPHOSPH9Q99550 1183 aa11.26□□□□□ -0.61
ETFA-217ENST00000560816 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
ETFA-217ENST00000560816 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
ETFA-217ENST00000560816 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
ETFA-217ENST00000560816 MLECQ14165 292 aa11.25□□□□□ -0.61
ETFA-217ENST00000560816 CCER1Q8TC90 406 aaPredicted RBP11.25□□□□□ -0.61
ETFA-217ENST00000560816 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
ETFA-217ENST00000560816 IQGAP3Q86VI3 1631 aa11.24□□□□□ -0.61
ETFA-217ENST00000560816 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
ETFA-217ENST00000560816 PKD2Q13563 968 aa11.23□□□□□ -0.61
ETFA-217ENST00000560816 ABCC3O15438 1527 aa11.23□□□□□ -0.61
ETFA-217ENST00000560816 LMTK2Q8IWU2 1503 aa11.23□□□□□ -0.61
ETFA-217ENST00000560816 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
ETFA-217ENST00000560816 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
ETFA-217ENST00000560816 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
ETFA-217ENST00000560816 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
ETFA-217ENST00000560816 TET3O43151 1660 aa11.19□□□□□ -0.62
ETFA-217ENST00000560816 ZC3H13Q5T200 1668 aaKnown RBP11.19□□□□□ -0.62
ETFA-217ENST00000560816 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
ETFA-217ENST00000560816 NPATQ14207 1427 aa11.18□□□□□ -0.62
ETFA-217ENST00000560816 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
ETFA-217ENST00000560816 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
ETFA-217ENST00000560816 ANKRD30BQ9BXX2 1392 aa11.16□□□□□ -0.62
ETFA-217ENST00000560816 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
ETFA-217ENST00000560816 CEP152O94986 1710 aa11.15□□□□□ -0.62
ETFA-217ENST00000560816 PTPRTO14522 1441 aa11.15□□□□□ -0.62
ETFA-217ENST00000560816 ZMYM3Q14202 1370 aa11.15□□□□□ -0.63
ETFA-217ENST00000560816 PLA2R1Q13018 1463 aa11.14□□□□□ -0.63
ETFA-217ENST00000560816 E9PCH4 1651 aa11.14□□□□□ -0.63
ETFA-217ENST00000560816 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
ETFA-217ENST00000560816 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
ETFA-217ENST00000560816 NOS1P29475 1434 aa11.12□□□□□ -0.63
ETFA-217ENST00000560816 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
ETFA-217ENST00000560816 TRPM2O94759 1503 aa11.12□□□□□ -0.63
ETFA-217ENST00000560816 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
ETFA-217ENST00000560816 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
ETFA-217ENST00000560816 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
ETFA-217ENST00000560816 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
ETFA-217ENST00000560816 MROH2AA6NES4 1674 aa11.11□□□□□ -0.63
ETFA-217ENST00000560816 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
ETFA-217ENST00000560816 FER1L4A9Z1Z3 1794 aa11.1□□□□□ -0.63
ETFA-217ENST00000560816 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
ETFA-217ENST00000560816 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
ETFA-217ENST00000560816 TNRQ92752 1358 aa11.08□□□□□ -0.64
ETFA-217ENST00000560816 RIMS1Q86UR5 1692 aaKnown RBP11.08□□□□□ -0.64
ETFA-217ENST00000560816 SYNMO15061 1565 aa11.07□□□□□ -0.64
ETFA-217ENST00000560816 UGGT1Q9NYU2 1555 aa11.07□□□□□ -0.64
ETFA-217ENST00000560816 SPHKAPQ2M3C7 1700 aa11.07□□□□□ -0.64
ETFA-217ENST00000560816 SLC52A1Q9NWF4 448 aa11.07□□□□□ -0.64
ETFA-217ENST00000560816 PREX1Q8TCU6 1659 aa11.07□□□□□ -0.64
ETFA-217ENST00000560816 PTPRMP28827 1452 aa11.06□□□□□ -0.64
ETFA-217ENST00000560816 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
ETFA-217ENST00000560816 ZEB1P37275 1124 aaPredicted RBP11.06□□□□□ -0.64
ETFA-217ENST00000560816 CLTCL1P53675 1640 aa11.06□□□□□ -0.64
ETFA-217ENST00000560816 TIMELESSQ9UNS1 1208 aa11.05□□□□□ -0.64
ETFA-217ENST00000560816 C3P01024 1663 aa11.04□□□□□ -0.64
ETFA-217ENST00000560816 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
ETFA-217ENST00000560816 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
ETFA-217ENST00000560816 IDI1Q13907 227 aa11.04□□□□□ -0.64
ETFA-217ENST00000560816 PIK3C2BO00750 1634 aa11.03□□□□□ -0.64
ETFA-217ENST00000560816 NLRP1Q9C000 1473 aa11.03□□□□□ -0.64
ETFA-217ENST00000560816 CHGAP10645 457 aaKnown RBP11.02□□□□□ -0.65
ETFA-217ENST00000560816 ADGRB3O60242 1522 aa11.02□□□□□ -0.65
ETFA-217ENST00000560816 MSH5O43196 834 aa11.01□□□□□ -0.65
ETFA-217ENST00000560816 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
ETFA-217ENST00000560816 L3MBTL2Q969R5 705 aa11.01□□□□□ -0.65
ETFA-217ENST00000560816 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
ETFA-217ENST00000560816 NEURL4Q96JN8 1562 aa11.01□□□□□ -0.65
ETFA-217ENST00000560816 ZNF326Q5BKZ1 582 aaKnown RBP10.99□□□□□ -0.65
ETFA-217ENST00000560816 A2ML1A8K2U0 1454 aa10.99□□□□□ -0.65
ETFA-217ENST00000560816 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
ETFA-217ENST00000560816 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
ETFA-217ENST00000560816 PPP1R15AO75807 674 aaPredicted RBP10.97□□□□□ -0.65
ETFA-217ENST00000560816 DCAF11Q8TEB1 546 aa10.97□□□□□ -0.65
ETFA-217ENST00000560816 UHRF1BP1Q6BDS2 1440 aa10.97□□□□□ -0.65
ETFA-217ENST00000560816 TMEM131LA2VDJ0 1609 aa10.97□□□□□ -0.65
ETFA-217ENST00000560816 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
ETFA-217ENST00000560816 STAC3Q96MF2 364 aa10.96□□□□□ -0.65
ETFA-217ENST00000560816 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms