RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 MROH2AA6NES4 1674 aa16.87■□□□□ 0.29
SNRPCP18-201ENST00000560619 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
SNRPCP18-201ENST00000560619 GGT6Q6P531 493 aa16.86■□□□□ 0.29
SNRPCP18-201ENST00000560619 KDM5DQ9BY66 1539 aa16.85■□□□□ 0.29
SNRPCP18-201ENST00000560619 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
SNRPCP18-201ENST00000560619 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
SNRPCP18-201ENST00000560619 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
SNRPCP18-201ENST00000560619 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
SNRPCP18-201ENST00000560619 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
SNRPCP18-201ENST00000560619 ZC3H13Q5T200 1668 aaKnown RBP16.82■□□□□ 0.28
SNRPCP18-201ENST00000560619 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
SNRPCP18-201ENST00000560619 ITGAEP38570 1179 aa16.82■□□□□ 0.28
SNRPCP18-201ENST00000560619 HFM1A2PYH4 1435 aa16.81■□□□□ 0.28
SNRPCP18-201ENST00000560619 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
SNRPCP18-201ENST00000560619 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
SNRPCP18-201ENST00000560619 KANK1Q14678 1352 aa16.8■□□□□ 0.28
SNRPCP18-201ENST00000560619 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
SNRPCP18-201ENST00000560619 NAIPQ13075 1403 aa16.79■□□□□ 0.28
SNRPCP18-201ENST00000560619 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
SNRPCP18-201ENST00000560619 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
SNRPCP18-201ENST00000560619 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
SNRPCP18-201ENST00000560619 LMTK2Q8IWU2 1503 aa16.78■□□□□ 0.28
SNRPCP18-201ENST00000560619 NPATQ14207 1427 aa16.78■□□□□ 0.28
SNRPCP18-201ENST00000560619 C3P01024 1663 aa16.77■□□□□ 0.28
SNRPCP18-201ENST00000560619 UNC13BO14795 1591 aa16.77■□□□□ 0.27
SNRPCP18-201ENST00000560619 ABCC3O15438 1527 aa16.76■□□□□ 0.27
SNRPCP18-201ENST00000560619 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
SNRPCP18-201ENST00000560619 PZPP20742 1482 aa16.73■□□□□ 0.27
SNRPCP18-201ENST00000560619 TRIM26Q12899 539 aaPredicted RBP16.73■□□□□ 0.27
SNRPCP18-201ENST00000560619 HRCP23327 699 aa16.71■□□□□ 0.27
SNRPCP18-201ENST00000560619 CAMSAP1Q5T5Y3 1602 aa16.7■□□□□ 0.26
SNRPCP18-201ENST00000560619 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
SNRPCP18-201ENST00000560619 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
SNRPCP18-201ENST00000560619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNRPCP18-201ENST00000560619 CEP152O94986 1710 aa16.7■□□□□ 0.26
SNRPCP18-201ENST00000560619 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
SNRPCP18-201ENST00000560619 NUP155O75694 1391 aa16.68■□□□□ 0.26
SNRPCP18-201ENST00000560619 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
SNRPCP18-201ENST00000560619 TET3O43151 1660 aa16.68■□□□□ 0.26
SNRPCP18-201ENST00000560619 PREX1Q8TCU6 1659 aa16.68■□□□□ 0.26
SNRPCP18-201ENST00000560619 SPATA31D1Q6ZQQ2 1576 aa16.67■□□□□ 0.26
SNRPCP18-201ENST00000560619 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
SNRPCP18-201ENST00000560619 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
SNRPCP18-201ENST00000560619 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
SNRPCP18-201ENST00000560619 TNRQ92752 1358 aa16.63■□□□□ 0.25
SNRPCP18-201ENST00000560619 LMTK3Q96Q04 1460 aa16.62■□□□□ 0.25
SNRPCP18-201ENST00000560619 NLRP1Q9C000 1473 aa16.62■□□□□ 0.25
SNRPCP18-201ENST00000560619 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
SNRPCP18-201ENST00000560619 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
SNRPCP18-201ENST00000560619 NOS1P29475 1434 aa16.62■□□□□ 0.25
SNRPCP18-201ENST00000560619 ZNF142P52746 1687 aaPredicted RBP16.6■□□□□ 0.25
SNRPCP18-201ENST00000560619 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
SNRPCP18-201ENST00000560619 SLC52A1Q9NWF4 448 aa16.59■□□□□ 0.25
SNRPCP18-201ENST00000560619 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
SNRPCP18-201ENST00000560619 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
SNRPCP18-201ENST00000560619 E9PCH4 1651 aa16.59■□□□□ 0.25
SNRPCP18-201ENST00000560619 CFAP65Q6ZU64 1925 aaKnown RBP16.58■□□□□ 0.25
SNRPCP18-201ENST00000560619 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
SNRPCP18-201ENST00000560619 RAB3GAP2Q9H2M9 1393 aa16.58■□□□□ 0.24
SNRPCP18-201ENST00000560619 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
SNRPCP18-201ENST00000560619 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
SNRPCP18-201ENST00000560619 PTPRTO14522 1441 aa16.55■□□□□ 0.24
SNRPCP18-201ENST00000560619 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
SNRPCP18-201ENST00000560619 THEMISQ8N1K5 641 aaPredicted RBP16.54■□□□□ 0.24
SNRPCP18-201ENST00000560619 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
SNRPCP18-201ENST00000560619 PLA2R1Q13018 1463 aa16.53■□□□□ 0.24
SNRPCP18-201ENST00000560619 SYNMO15061 1565 aa16.52■□□□□ 0.24
SNRPCP18-201ENST00000560619 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
SNRPCP18-201ENST00000560619 PKD2Q13563 968 aa16.51■□□□□ 0.23
SNRPCP18-201ENST00000560619 IDI1Q13907 227 aa16.51■□□□□ 0.23
SNRPCP18-201ENST00000560619 PIK3C2BO00750 1634 aa16.51■□□□□ 0.23
SNRPCP18-201ENST00000560619 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
SNRPCP18-201ENST00000560619 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
SNRPCP18-201ENST00000560619 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
SNRPCP18-201ENST00000560619 TRPM2O94759 1503 aa16.48■□□□□ 0.23
SNRPCP18-201ENST00000560619 HSPA2P54652 639 aa16.46■□□□□ 0.23
SNRPCP18-201ENST00000560619 SLIT1O75093 1534 aa16.45■□□□□ 0.22
SNRPCP18-201ENST00000560619 ADGRB3O60242 1522 aa16.45■□□□□ 0.22
SNRPCP18-201ENST00000560619 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
SNRPCP18-201ENST00000560619 STRCQ7RTU9 1775 aa16.43■□□□□ 0.22
SNRPCP18-201ENST00000560619 HDGFP51858 240 aaKnown RBP16.43■□□□□ 0.22
SNRPCP18-201ENST00000560619 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
SNRPCP18-201ENST00000560619 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
SNRPCP18-201ENST00000560619 TMEM131LA2VDJ0 1609 aa16.43■□□□□ 0.22
SNRPCP18-201ENST00000560619 TMEM2Q9UHN6 1383 aa16.42■□□□□ 0.22
SNRPCP18-201ENST00000560619 MED14O60244 1454 aa16.42■□□□□ 0.22
SNRPCP18-201ENST00000560619 NEURL4Q96JN8 1562 aa16.41■□□□□ 0.22
SNRPCP18-201ENST00000560619 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
SNRPCP18-201ENST00000560619 KIF1BO60333 1816 aa16.39■□□□□ 0.21
SNRPCP18-201ENST00000560619 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
SNRPCP18-201ENST00000560619 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
SNRPCP18-201ENST00000560619 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
SNRPCP18-201ENST00000560619 CCDC144AA2RUR9 1427 aa16.38■□□□□ 0.21
SNRPCP18-201ENST00000560619 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNRPCP18-201ENST00000560619 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
SNRPCP18-201ENST00000560619 SCAF11Q99590 1463 aaKnown RBP16.36■□□□□ 0.21
SNRPCP18-201ENST00000560619 TXNDC2Q86VQ3 553 aa16.36■□□□□ 0.21
SNRPCP18-201ENST00000560619 ZFYVE9O95405 1425 aa16.36■□□□□ 0.21
SNRPCP18-201ENST00000560619 FOXD1Q16676 465 aa16.35■□□□□ 0.21
SNRPCP18-201ENST00000560619 NCKAP5LQ9HCH0 1330 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms