RNA–Protein interactions for RNA: ENST00000560511.5

CHRNB4-205, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 3

Gene CHRNB4, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-205ENST00000560511 SYCP2Q9BX26 1530 aa13.37□□□□□ -0.27
CHRNB4-205ENST00000560511 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
CHRNB4-205ENST00000560511 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
CHRNB4-205ENST00000560511 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
CHRNB4-205ENST00000560511 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
CHRNB4-205ENST00000560511 MYO3AQ8NEV4 1616 aa13.36□□□□□ -0.27
CHRNB4-205ENST00000560511 A2MP01023 1474 aa13.36□□□□□ -0.27
CHRNB4-205ENST00000560511 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
CHRNB4-205ENST00000560511 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
CHRNB4-205ENST00000560511 ATP7AQ04656 1500 aa13.34□□□□□ -0.27
CHRNB4-205ENST00000560511 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
CHRNB4-205ENST00000560511 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
CHRNB4-205ENST00000560511 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
CHRNB4-205ENST00000560511 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.28
CHRNB4-205ENST00000560511 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
CHRNB4-205ENST00000560511 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
CHRNB4-205ENST00000560511 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
CHRNB4-205ENST00000560511 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
CHRNB4-205ENST00000560511 FBXO31Q5XUX0 539 aaPredicted RBP13.3□□□□□ -0.28
CHRNB4-205ENST00000560511 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
CHRNB4-205ENST00000560511 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
CHRNB4-205ENST00000560511 ANKLE2Q86XL3 938 aa13.29□□□□□ -0.28
CHRNB4-205ENST00000560511 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
CHRNB4-205ENST00000560511 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
CHRNB4-205ENST00000560511 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
CHRNB4-205ENST00000560511 TNRQ92752 1358 aa13.28□□□□□ -0.28
CHRNB4-205ENST00000560511 CPS1P31327 1500 aa13.28□□□□□ -0.28
CHRNB4-205ENST00000560511 KIF3BO15066 747 aa13.27□□□□□ -0.29
CHRNB4-205ENST00000560511 APLP2Q06481 763 aa13.27□□□□□ -0.29
CHRNB4-205ENST00000560511 MBD5Q9P267 1494 aa13.27□□□□□ -0.29
CHRNB4-205ENST00000560511 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
CHRNB4-205ENST00000560511 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
CHRNB4-205ENST00000560511 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
CHRNB4-205ENST00000560511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHRNB4-205ENST00000560511 WASHC2CQ9Y4E1 1318 aa13.25□□□□□ -0.29
CHRNB4-205ENST00000560511 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
CHRNB4-205ENST00000560511 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
CHRNB4-205ENST00000560511 DHX29Q7Z478 1369 aaKnown RBP13.23□□□□□ -0.29
CHRNB4-205ENST00000560511 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
CHRNB4-205ENST00000560511 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
CHRNB4-205ENST00000560511 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
CHRNB4-205ENST00000560511 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
CHRNB4-205ENST00000560511 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
CHRNB4-205ENST00000560511 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
CHRNB4-205ENST00000560511 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
CHRNB4-205ENST00000560511 PZPP20742 1482 aa13.19□□□□□ -0.3
CHRNB4-205ENST00000560511 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
CHRNB4-205ENST00000560511 VWDEQ8N2E2 1590 aa13.19□□□□□ -0.3
CHRNB4-205ENST00000560511 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
CHRNB4-205ENST00000560511 ARHGEF5Q12774 1597 aa13.18□□□□□ -0.3
CHRNB4-205ENST00000560511 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
CHRNB4-205ENST00000560511 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
CHRNB4-205ENST00000560511 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
CHRNB4-205ENST00000560511 NLRP1Q9C000 1473 aa13.16□□□□□ -0.3
CHRNB4-205ENST00000560511 MED14O60244 1454 aa13.15□□□□□ -0.3
CHRNB4-205ENST00000560511 LRRC7Q96NW7 1537 aa13.14□□□□□ -0.31
CHRNB4-205ENST00000560511 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
CHRNB4-205ENST00000560511 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
CHRNB4-205ENST00000560511 DEPDC5O75140 1603 aa13.13□□□□□ -0.31
CHRNB4-205ENST00000560511 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
CHRNB4-205ENST00000560511 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
CHRNB4-205ENST00000560511 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
CHRNB4-205ENST00000560511 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
CHRNB4-205ENST00000560511 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
CHRNB4-205ENST00000560511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRNB4-205ENST00000560511 ABCC5O15440 1437 aa13.1□□□□□ -0.31
CHRNB4-205ENST00000560511 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
CHRNB4-205ENST00000560511 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
CHRNB4-205ENST00000560511 CFAP65Q6ZU64 1925 aaKnown RBP13.08□□□□□ -0.32
CHRNB4-205ENST00000560511 SYNMO15061 1565 aa13.07□□□□□ -0.32
CHRNB4-205ENST00000560511 DAPK1P53355 1430 aa13.07□□□□□ -0.32
CHRNB4-205ENST00000560511 LTKP29376 864 aa13.07□□□□□ -0.32
CHRNB4-205ENST00000560511 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
CHRNB4-205ENST00000560511 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
CHRNB4-205ENST00000560511 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
CHRNB4-205ENST00000560511 ERVK-7P63135 1459 aa13.05□□□□□ -0.32
CHRNB4-205ENST00000560511 SCAF11Q99590 1463 aaKnown RBP13.05□□□□□ -0.32
CHRNB4-205ENST00000560511 ABCC3O15438 1527 aa13.05□□□□□ -0.32
CHRNB4-205ENST00000560511 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
CHRNB4-205ENST00000560511 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
CHRNB4-205ENST00000560511 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
CHRNB4-205ENST00000560511 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
CHRNB4-205ENST00000560511 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
CHRNB4-205ENST00000560511 DUOX2Q9NRD8 1548 aa13.03□□□□□ -0.32
CHRNB4-205ENST00000560511 CHIC2Q9UKJ5 165 aa13.03□□□□□ -0.32
CHRNB4-205ENST00000560511 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.33
CHRNB4-205ENST00000560511 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
CHRNB4-205ENST00000560511 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
CHRNB4-205ENST00000560511 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.33
CHRNB4-205ENST00000560511 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
CHRNB4-205ENST00000560511 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
CHRNB4-205ENST00000560511 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
CHRNB4-205ENST00000560511 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
CHRNB4-205ENST00000560511 ERBINQ96RT1 1412 aa13□□□□□ -0.33
CHRNB4-205ENST00000560511 BCANQ96GW7 911 aa13□□□□□ -0.33
CHRNB4-205ENST00000560511 CEP152O94986 1710 aa12.99□□□□□ -0.33
CHRNB4-205ENST00000560511 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
CHRNB4-205ENST00000560511 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
CHRNB4-205ENST00000560511 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
CHRNB4-205ENST00000560511 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms