RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
PKNOX1-209ENST00000560448 CHIC2Q9UKJ5 165 aa21.23■□□□□ 0.99
PKNOX1-209ENST00000560448 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
PKNOX1-209ENST00000560448 GGT6Q6P531 493 aa21.21■□□□□ 0.99
PKNOX1-209ENST00000560448 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
PKNOX1-209ENST00000560448 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
PKNOX1-209ENST00000560448 ZC3H13Q5T200 1668 aaKnown RBP21.19■□□□□ 0.98
PKNOX1-209ENST00000560448 DEPDC5O75140 1603 aa21.17■□□□□ 0.98
PKNOX1-209ENST00000560448 PRDM15P57071 1507 aaPredicted RBP21.17■□□□□ 0.98
PKNOX1-209ENST00000560448 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.97
PKNOX1-209ENST00000560448 ITGAEP38570 1179 aa21.13■□□□□ 0.97
PKNOX1-209ENST00000560448 CLTCQ00610 1675 aaKnown RBP21.13■□□□□ 0.97
PKNOX1-209ENST00000560448 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
PKNOX1-209ENST00000560448 KANK1Q14678 1352 aa21.13■□□□□ 0.97
PKNOX1-209ENST00000560448 MROH1Q8NDA8 1641 aa21.13■□□□□ 0.97
PKNOX1-209ENST00000560448 NPATQ14207 1427 aa21.13■□□□□ 0.97
PKNOX1-209ENST00000560448 C3P01024 1663 aa21.12■□□□□ 0.97
PKNOX1-209ENST00000560448 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
PKNOX1-209ENST00000560448 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
PKNOX1-209ENST00000560448 ABCC3O15438 1527 aa21.1■□□□□ 0.97
PKNOX1-209ENST00000560448 LMTK2Q8IWU2 1503 aa21.08■□□□□ 0.97
PKNOX1-209ENST00000560448 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
PKNOX1-209ENST00000560448 VWDEQ8N2E2 1590 aa21.08■□□□□ 0.96
PKNOX1-209ENST00000560448 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.96
PKNOX1-209ENST00000560448 PZPP20742 1482 aa21.08■□□□□ 0.96
PKNOX1-209ENST00000560448 UNC13BO14795 1591 aa21.06■□□□□ 0.96
PKNOX1-209ENST00000560448 NAIPQ13075 1403 aa21.06■□□□□ 0.96
PKNOX1-209ENST00000560448 ARHGAP31Q2M1Z3 1444 aa21.05■□□□□ 0.96
PKNOX1-209ENST00000560448 PREX1Q8TCU6 1659 aa21.03■□□□□ 0.96
PKNOX1-209ENST00000560448 CEBPAP49715 358 aaPredicted RBP21.03■□□□□ 0.96
PKNOX1-209ENST00000560448 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
PKNOX1-209ENST00000560448 CEP152O94986 1710 aa21.01■□□□□ 0.95
PKNOX1-209ENST00000560448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.95
PKNOX1-209ENST00000560448 UHRF1BP1Q6BDS2 1440 aa21■□□□□ 0.95
PKNOX1-209ENST00000560448 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
PKNOX1-209ENST00000560448 IQGAP3Q86VI3 1631 aa20.98■□□□□ 0.95
PKNOX1-209ENST00000560448 LMTK3Q96Q04 1460 aa20.98■□□□□ 0.95
PKNOX1-209ENST00000560448 TET3O43151 1660 aa20.97■□□□□ 0.95
PKNOX1-209ENST00000560448 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
PKNOX1-209ENST00000560448 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
PKNOX1-209ENST00000560448 SPATA31D1Q6ZQQ2 1576 aa20.96■□□□□ 0.95
PKNOX1-209ENST00000560448 NUP155O75694 1391 aa20.95■□□□□ 0.94
PKNOX1-209ENST00000560448 NLRP1Q9C000 1473 aa20.94■□□□□ 0.94
PKNOX1-209ENST00000560448 TNRQ92752 1358 aa20.94■□□□□ 0.94
PKNOX1-209ENST00000560448 ERVK-7P63135 1459 aa20.94■□□□□ 0.94
PKNOX1-209ENST00000560448 ZNF142P52746 1687 aaPredicted RBP20.93■□□□□ 0.94
PKNOX1-209ENST00000560448 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
PKNOX1-209ENST00000560448 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.94
PKNOX1-209ENST00000560448 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
PKNOX1-209ENST00000560448 A2ML1A8K2U0 1454 aa20.88■□□□□ 0.93
PKNOX1-209ENST00000560448 CEP170BQ9Y4F5 1589 aaPredicted RBP20.88■□□□□ 0.93
PKNOX1-209ENST00000560448 NOS1P29475 1434 aa20.87■□□□□ 0.93
PKNOX1-209ENST00000560448 HRCP23327 699 aa20.87■□□□□ 0.93
PKNOX1-209ENST00000560448 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
PKNOX1-209ENST00000560448 PLA2R1Q13018 1463 aa20.84■□□□□ 0.93
PKNOX1-209ENST00000560448 E9PCH4 1651 aa20.83■□□□□ 0.93
PKNOX1-209ENST00000560448 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
PKNOX1-209ENST00000560448 KDM5AP29375 1690 aaKnown RBP20.82■□□□□ 0.92
PKNOX1-209ENST00000560448 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
PKNOX1-209ENST00000560448 CFAP65Q6ZU64 1925 aaKnown RBP20.8■□□□□ 0.92
PKNOX1-209ENST00000560448 THEMISQ8N1K5 641 aaPredicted RBP20.79■□□□□ 0.92
PKNOX1-209ENST00000560448 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
PKNOX1-209ENST00000560448 SYNMO15061 1565 aa20.78■□□□□ 0.92
PKNOX1-209ENST00000560448 SLC4A1APQ9BWU0 796 aaKnown RBP20.78■□□□□ 0.92
PKNOX1-209ENST00000560448 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.91
PKNOX1-209ENST00000560448 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.91
PKNOX1-209ENST00000560448 PTPRTO14522 1441 aa20.77■□□□□ 0.91
PKNOX1-209ENST00000560448 HSPA2P54652 639 aa20.76■□□□□ 0.91
PKNOX1-209ENST00000560448 PKD2Q13563 968 aa20.75■□□□□ 0.91
PKNOX1-209ENST00000560448 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
PKNOX1-209ENST00000560448 PIK3C2BO00750 1634 aa20.74■□□□□ 0.91
PKNOX1-209ENST00000560448 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
PKNOX1-209ENST00000560448 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
PKNOX1-209ENST00000560448 IDI1Q13907 227 aa20.72■□□□□ 0.91
PKNOX1-209ENST00000560448 TRPM2O94759 1503 aa20.71■□□□□ 0.91
PKNOX1-209ENST00000560448 MPHOSPH9Q99550 1183 aa20.71■□□□□ 0.91
PKNOX1-209ENST00000560448 ADGRB3O60242 1522 aa20.71■□□□□ 0.91
PKNOX1-209ENST00000560448 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
PKNOX1-209ENST00000560448 SLIT1O75093 1534 aa20.7■□□□□ 0.9
PKNOX1-209ENST00000560448 STRCQ7RTU9 1775 aa20.69■□□□□ 0.9
PKNOX1-209ENST00000560448 ANKLE2Q86XL3 938 aa20.68■□□□□ 0.9
PKNOX1-209ENST00000560448 ARHGAP23Q9P227 1491 aa20.67■□□□□ 0.9
PKNOX1-209ENST00000560448 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
PKNOX1-209ENST00000560448 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
PKNOX1-209ENST00000560448 TMEM2Q9UHN6 1383 aa20.65■□□□□ 0.9
PKNOX1-209ENST00000560448 TMEM131LA2VDJ0 1609 aa20.65■□□□□ 0.9
PKNOX1-209ENST00000560448 MED14O60244 1454 aa20.64■□□□□ 0.9
PKNOX1-209ENST00000560448 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
PKNOX1-209ENST00000560448 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
PKNOX1-209ENST00000560448 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
PKNOX1-209ENST00000560448 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
PKNOX1-209ENST00000560448 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
PKNOX1-209ENST00000560448 KIF1BO60333 1816 aa20.59■□□□□ 0.89
PKNOX1-209ENST00000560448 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.59■□□□□ 0.89
PKNOX1-209ENST00000560448 NCKAP5LQ9HCH0 1330 aa20.59■□□□□ 0.89
PKNOX1-209ENST00000560448 NPHP4O75161 1426 aaPredicted RBP20.57■□□□□ 0.88
PKNOX1-209ENST00000560448 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
PKNOX1-209ENST00000560448 ZFYVE9O95405 1425 aa20.56■□□□□ 0.88
PKNOX1-209ENST00000560448 IQGAP1P46940 1657 aa20.55■□□□□ 0.88
PKNOX1-209ENST00000560448 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms