RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
RABGGTA-216ENST00000560243 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
RABGGTA-216ENST00000560243 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
RABGGTA-216ENST00000560243 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-216ENST00000560243 NPATQ14207 1427 aa18.04■□□□□ 0.48
RABGGTA-216ENST00000560243 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
RABGGTA-216ENST00000560243 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
RABGGTA-216ENST00000560243 MROH1Q8NDA8 1641 aa18.02■□□□□ 0.48
RABGGTA-216ENST00000560243 EIF2AK4Q9P2K8 1649 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-216ENST00000560243 WASHC2CQ9Y4E1 1318 aa18.01■□□□□ 0.47
RABGGTA-216ENST00000560243 FBXO31Q5XUX0 539 aaPredicted RBP18■□□□□ 0.47
RABGGTA-216ENST00000560243 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
RABGGTA-216ENST00000560243 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
RABGGTA-216ENST00000560243 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
RABGGTA-216ENST00000560243 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
RABGGTA-216ENST00000560243 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
RABGGTA-216ENST00000560243 ABCC3O15438 1527 aa17.98■□□□□ 0.47
RABGGTA-216ENST00000560243 ERBINQ96RT1 1412 aa17.97■□□□□ 0.47
RABGGTA-216ENST00000560243 PZPP20742 1482 aa17.96■□□□□ 0.47
RABGGTA-216ENST00000560243 CEP152O94986 1710 aa17.96■□□□□ 0.47
RABGGTA-216ENST00000560243 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
RABGGTA-216ENST00000560243 ZNF142P52746 1687 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-216ENST00000560243 ZC3H13Q5T200 1668 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-216ENST00000560243 CEP170BQ9Y4F5 1589 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-216ENST00000560243 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-216ENST00000560243 TNRQ92752 1358 aa17.92■□□□□ 0.46
RABGGTA-216ENST00000560243 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
RABGGTA-216ENST00000560243 CAMSAP1Q5T5Y3 1602 aa17.92■□□□□ 0.46
RABGGTA-216ENST00000560243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.463e-8■■□□□ 11.8
RABGGTA-216ENST00000560243 CFAP65Q6ZU64 1925 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-216ENST00000560243 ITGAEP38570 1179 aa17.89■□□□□ 0.45
RABGGTA-216ENST00000560243 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
RABGGTA-216ENST00000560243 ANKRD50Q9ULJ7 1429 aa17.87■□□□□ 0.45
RABGGTA-216ENST00000560243 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-216ENST00000560243 NCKAP5LQ9HCH0 1330 aa17.86■□□□□ 0.45
RABGGTA-216ENST00000560243 ERVK-7P63135 1459 aa17.86■□□□□ 0.45
RABGGTA-216ENST00000560243 SPATA31D1Q6ZQQ2 1576 aa17.86■□□□□ 0.45
RABGGTA-216ENST00000560243 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
RABGGTA-216ENST00000560243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.85■□□□□ 0.45
RABGGTA-216ENST00000560243 KANK1Q14678 1352 aa17.84■□□□□ 0.45
RABGGTA-216ENST00000560243 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
RABGGTA-216ENST00000560243 PTPRTO14522 1441 aa17.83■□□□□ 0.45
RABGGTA-216ENST00000560243 RRBP1Q9P2E9 1410 aaKnown RBP17.83■□□□□ 0.45
RABGGTA-216ENST00000560243 ROCK1Q13464 1354 aa17.83■□□□□ 0.45
RABGGTA-216ENST00000560243 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
RABGGTA-216ENST00000560243 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
RABGGTA-216ENST00000560243 ARHGAP31Q2M1Z3 1444 aa17.82■□□□□ 0.44
RABGGTA-216ENST00000560243 LMTK2Q8IWU2 1503 aa17.82■□□□□ 0.44
RABGGTA-216ENST00000560243 UGGT1Q9NYU2 1555 aa17.79■□□□□ 0.44
RABGGTA-216ENST00000560243 PKD2Q13563 968 aa17.78■□□□□ 0.44
RABGGTA-216ENST00000560243 UNC13BO14795 1591 aa17.78■□□□□ 0.44
RABGGTA-216ENST00000560243 EFCAB6Q5THR3 1501 aa17.77■□□□□ 0.44
RABGGTA-216ENST00000560243 NEURL4Q96JN8 1562 aa17.76■□□□□ 0.43
RABGGTA-216ENST00000560243 THEMISQ8N1K5 641 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-216ENST00000560243 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
RABGGTA-216ENST00000560243 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-216ENST00000560243 UBR1Q8IWV7 1749 aa17.75■□□□□ 0.43
RABGGTA-216ENST00000560243 SYNMO15061 1565 aa17.74■□□□□ 0.43
RABGGTA-216ENST00000560243 LTBP4Q8N2S1 1624 aa17.73■□□□□ 0.43
RABGGTA-216ENST00000560243 FBXO41Q8TF61 875 aa17.73■□□□□ 0.43
RABGGTA-216ENST00000560243 TET3O43151 1660 aa17.73■□□□□ 0.43
RABGGTA-216ENST00000560243 PIK3C2BO00750 1634 aa17.72■□□□□ 0.43
RABGGTA-216ENST00000560243 NOS1P29475 1434 aa17.72■□□□□ 0.43
RABGGTA-216ENST00000560243 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-216ENST00000560243 ANKLE2Q86XL3 938 aa17.71■□□□□ 0.43
RABGGTA-216ENST00000560243 IQGAP3Q86VI3 1631 aa17.7■□□□□ 0.42
RABGGTA-216ENST00000560243 IDI1Q13907 227 aa17.7■□□□□ 0.42
RABGGTA-216ENST00000560243 GCC2Q8IWJ2 1684 aa17.7■□□□□ 0.42
RABGGTA-216ENST00000560243 NUP155O75694 1391 aa17.69■□□□□ 0.42
RABGGTA-216ENST00000560243 E9PCH4 1651 aa17.68■□□□□ 0.42
RABGGTA-216ENST00000560243 NAIPQ13075 1403 aa17.68■□□□□ 0.42
RABGGTA-216ENST00000560243 RPRD2Q5VT52 1461 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-216ENST00000560243 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
RABGGTA-216ENST00000560243 MED14O60244 1454 aa17.66■□□□□ 0.42
RABGGTA-216ENST00000560243 ARHGAP23Q9P227 1491 aa17.65■□□□□ 0.42
RABGGTA-216ENST00000560243 LTKP29376 864 aa17.65■□□□□ 0.42
RABGGTA-216ENST00000560243 SLIT1O75093 1534 aa17.65■□□□□ 0.42
RABGGTA-216ENST00000560243 IQGAP1P46940 1657 aa17.64■□□□□ 0.42
RABGGTA-216ENST00000560243 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-216ENST00000560243 STAG3Q9UJ98 1225 aa17.63■□□□□ 0.41
RABGGTA-216ENST00000560243 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-216ENST00000560243 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
RABGGTA-216ENST00000560243 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
RABGGTA-216ENST00000560243 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
RABGGTA-216ENST00000560243 TXNDC2Q86VQ3 553 aa17.62■□□□□ 0.41
RABGGTA-216ENST00000560243 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
RABGGTA-216ENST00000560243 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
RABGGTA-216ENST00000560243 EID1Q9Y6B2 187 aa17.58■□□□□ 0.4
RABGGTA-216ENST00000560243 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.4
RABGGTA-216ENST00000560243 STRCP1A6NGW2 1772 aa17.57■□□□□ 0.4
RABGGTA-216ENST00000560243 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
RABGGTA-216ENST00000560243 SPHKAPQ2M3C7 1700 aa17.55■□□□□ 0.4
RABGGTA-216ENST00000560243 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-216ENST00000560243 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
RABGGTA-216ENST00000560243 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-216ENST00000560243 ZFYVE9O95405 1425 aa17.53■□□□□ 0.4
RABGGTA-216ENST00000560243 CPS1P31327 1500 aa17.52■□□□□ 0.4
RABGGTA-216ENST00000560243 RIMS2Q9UQ26 1411 aa17.51■□□□□ 0.39
RABGGTA-216ENST00000560243 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
RABGGTA-216ENST00000560243 NUTM2DQ5VT03 806 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms