RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
TPM1-222ENST00000560131 KDM4FA0A1W2PPD8 638 aa8.68□□□□□ -1.02
TPM1-222ENST00000560131 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
TPM1-222ENST00000560131 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
TPM1-222ENST00000560131 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
TPM1-222ENST00000560131 KCNH8Q96L42 1107 aa8.67□□□□□ -1.02
TPM1-222ENST00000560131 MFSD10Q14728 455 aa8.66□□□□□ -1.02
TPM1-222ENST00000560131 BARGINQ6ZT62 677 aa8.65□□□□□ -1.02
TPM1-222ENST00000560131 VPS9D1Q9Y2B5 631 aa8.65□□□□□ -1.02
TPM1-222ENST00000560131 THSD4Q6ZMP0 1018 aa8.64□□□□□ -1.03
TPM1-222ENST00000560131 PTCD2Q8WV60 388 aaKnown RBP8.63□□□□□ -1.03
TPM1-222ENST00000560131 KCNK17Q96T54 332 aa8.63□□□□□ -1.03
TPM1-222ENST00000560131 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
TPM1-222ENST00000560131 HRCP23327 699 aa8.62□□□□□ -1.03
TPM1-222ENST00000560131 DDX27Q96GQ7 796 aaKnown RBP8.62□□□□□ -1.03
TPM1-222ENST00000560131 CAMK2BQ13554 666 aa8.61□□□□□ -1.03
TPM1-222ENST00000560131 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
TPM1-222ENST00000560131 AK7Q96M32 723 aa8.6□□□□□ -1.03
TPM1-222ENST00000560131 SUPT5HO00267 1087 aaKnown RBP8.59□□□□□ -1.03
TPM1-222ENST00000560131 WNT2BQ93097 391 aa8.58□□□□□ -1.04
TPM1-222ENST00000560131 SLC4A5Q9BY07 1137 aa8.58□□□□□ -1.04
TPM1-222ENST00000560131 TBC1D12O60347 775 aa8.56□□□□□ -1.04
TPM1-222ENST00000560131 LAPTM4AQ15012 233 aa8.56□□□□□ -1.04
TPM1-222ENST00000560131 BHMG1C9JSJ3 638 aaPredicted RBP8.55□□□□□ -1.04
TPM1-222ENST00000560131 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
TPM1-222ENST00000560131 RBM26Q5T8P6 1007 aaKnown RBP8.54□□□□□ -1.04
TPM1-222ENST00000560131 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
TPM1-222ENST00000560131 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
TPM1-222ENST00000560131 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
TPM1-222ENST00000560131 MLLT3P42568 568 aaPredicted RBP8.52□□□□□ -1.05
TPM1-222ENST00000560131 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
TPM1-222ENST00000560131 GPBP1L1Q9HC44 474 aaPredicted RBP8.51□□□□□ -1.05
TPM1-222ENST00000560131 PLPP6Q8IY26 295 aa8.5□□□□□ -1.05
TPM1-222ENST00000560131 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
TPM1-222ENST00000560131 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
TPM1-222ENST00000560131 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
TPM1-222ENST00000560131 BCL2L12Q9HB09 334 aa8.49□□□□□ -1.05
TPM1-222ENST00000560131 GPHNQ9NQX3 736 aaPredicted RBP8.49□□□□□ -1.05
TPM1-222ENST00000560131 SPDYE16A6NNV3 312 aaPredicted RBP8.48□□□□□ -1.05
TPM1-222ENST00000560131 LCE2BO14633 110 aa8.48□□□□□ -1.05
TPM1-222ENST00000560131 TRIM66O15016 1216 aa8.48□□□□□ -1.05
TPM1-222ENST00000560131 FOXK1P85037 733 aa8.48□□□□□ -1.05
TPM1-222ENST00000560131 PDE4DQ08499 809 aa8.47□□□□□ -1.05
TPM1-222ENST00000560131 ZBED2Q9BTP6 218 aa8.47□□□□□ -1.05
TPM1-222ENST00000560131 ZMYND15Q9H091 742 aa8.47□□□□□ -1.05
TPM1-222ENST00000560131 GFRA3O60609 400 aa8.46□□□□□ -1.06
TPM1-222ENST00000560131 PTPREP23469 700 aa8.46□□□□□ -1.06
TPM1-222ENST00000560131 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
TPM1-222ENST00000560131 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
TPM1-222ENST00000560131 DPYSL4O14531 572 aa8.44□□□□□ -1.06
TPM1-222ENST00000560131 PDIA6Q15084 440 aa8.43□□□□□ -1.06
TPM1-222ENST00000560131 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
TPM1-222ENST00000560131 MYT1Q01538 1121 aa8.41□□□□□ -1.06
TPM1-222ENST00000560131 KCNC4Q03721 635 aa8.41□□□□□ -1.06
TPM1-222ENST00000560131 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
TPM1-222ENST00000560131 ANKK1Q8NFD2 765 aa8.4□□□□□ -1.06
TPM1-222ENST00000560131 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
TPM1-222ENST00000560131 FOSBP53539 338 aa8.39□□□□□ -1.07
TPM1-222ENST00000560131 DSG2Q14126 1118 aa8.39□□□□□ -1.07
TPM1-222ENST00000560131 DCAF1Q9Y4B6 1507 aa8.39□□□□□ -1.07
TPM1-222ENST00000560131 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
TPM1-222ENST00000560131 NYAP1Q6ZVC0 841 aa8.38□□□□□ -1.07
TPM1-222ENST00000560131 GPR37O15354 613 aa8.37□□□□□ -1.07
TPM1-222ENST00000560131 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
TPM1-222ENST00000560131 FAM117AQ9C073 453 aa8.37□□□□□ -1.07
TPM1-222ENST00000560131 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
TPM1-222ENST00000560131 DDRGK1Q96HY6 314 aa8.35□□□□□ -1.07
TPM1-222ENST00000560131 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
TPM1-222ENST00000560131 BCAMP50895 628 aa8.34□□□□□ -1.07
TPM1-222ENST00000560131 SOWAHBA6NEL2 793 aa8.33□□□□□ -1.08
TPM1-222ENST00000560131 IRF6O14896 467 aa8.33□□□□□ -1.08
TPM1-222ENST00000560131 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
TPM1-222ENST00000560131 UPF1Q92900 1129 aaKnown RBP eCLIP8.33□□□□□ -1.08
TPM1-222ENST00000560131 ZNF775Q96BV0 537 aaPredicted RBP8.33□□□□□ -1.08
TPM1-222ENST00000560131 RABGEF1Q9UJ41 708 aa8.33□□□□□ -1.08
TPM1-222ENST00000560131 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
TPM1-222ENST00000560131 GRXCR2A6NFK2 248 aa8.32□□□□□ -1.08
TPM1-222ENST00000560131 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
TPM1-222ENST00000560131 PLEKHG3A1L390 1219 aa8.31□□□□□ -1.08
TPM1-222ENST00000560131 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
TPM1-222ENST00000560131 AMHR2Q16671 573 aa8.31□□□□□ -1.08
TPM1-222ENST00000560131 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
TPM1-222ENST00000560131 ADAM33Q9BZ11 813 aa8.31□□□□□ -1.08
TPM1-222ENST00000560131 CCDC180Q9P1Z9 1646 aa8.3□□□□□ -1.08
TPM1-222ENST00000560131 GNPATO15228 680 aa8.3□□□□□ -1.08
TPM1-222ENST00000560131 LAPTM4BQ86VI4 370 aa8.3□□□□□ -1.08
TPM1-222ENST00000560131 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
TPM1-222ENST00000560131 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
TPM1-222ENST00000560131 WBP1LQ9NX94 342 aa8.3□□□□□ -1.08
TPM1-222ENST00000560131 FLIIQ13045 1269 aa8.29□□□□□ -1.08
TPM1-222ENST00000560131 FCHSD2O94868 740 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 OSBPP22059 807 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 HIC1Q14526 733 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 GOPCQ9HD26 462 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 PODXL2Q9NZ53 605 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 MYO15BQ96JP2 1530 aa8.28□□□□□ -1.08
TPM1-222ENST00000560131 PPP1R3GB7ZBB8 358 aa8.26□□□□□ -1.09
TPM1-222ENST00000560131 ZFRQ96KR1 1074 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms