RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
RABGGTA-213ENST00000560127 TNRQ92752 1358 aa20.98■□□□□ 0.95
RABGGTA-213ENST00000560127 FBXO31Q5XUX0 539 aaPredicted RBP20.98■□□□□ 0.95
RABGGTA-213ENST00000560127 MBD5Q9P267 1494 aa20.97■□□□□ 0.95
RABGGTA-213ENST00000560127 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
RABGGTA-213ENST00000560127 PZPP20742 1482 aa20.96■□□□□ 0.95
RABGGTA-213ENST00000560127 STRCP1A6NGW2 1772 aa20.95■□□□□ 0.94
RABGGTA-213ENST00000560127 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
RABGGTA-213ENST00000560127 DHX29Q7Z478 1369 aaKnown RBP20.95■□□□□ 0.94
RABGGTA-213ENST00000560127 RTEL1-TNFRSF6BF6WH68 1400 aa20.95■□□□□ 0.94
RABGGTA-213ENST00000560127 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
RABGGTA-213ENST00000560127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.94■□□□□ 0.94
RABGGTA-213ENST00000560127 DEPDC5O75140 1603 aa20.93■□□□□ 0.94
RABGGTA-213ENST00000560127 ANKLE2Q86XL3 938 aa20.93■□□□□ 0.94
RABGGTA-213ENST00000560127 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
RABGGTA-213ENST00000560127 KDM5DQ9BY66 1539 aa20.93■□□□□ 0.94
RABGGTA-213ENST00000560127 MED14O60244 1454 aa20.92■□□□□ 0.94
RABGGTA-213ENST00000560127 FAM135AQ9P2D6 1515 aa20.92■□□□□ 0.94
RABGGTA-213ENST00000560127 IQGAP1P46940 1657 aa20.92■□□□□ 0.94
RABGGTA-213ENST00000560127 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
RABGGTA-213ENST00000560127 NPHP4O75161 1426 aaPredicted RBP20.9■□□□□ 0.94
RABGGTA-213ENST00000560127 KIF3BO15066 747 aa20.9■□□□□ 0.94
RABGGTA-213ENST00000560127 UGGT1Q9NYU2 1555 aa20.89■□□□□ 0.94
RABGGTA-213ENST00000560127 NLRP1Q9C000 1473 aa20.88■□□□□ 0.93
RABGGTA-213ENST00000560127 MIA2Q96PC5 1412 aa20.88■□□□□ 0.93
RABGGTA-213ENST00000560127 THEMISQ8N1K5 641 aaPredicted RBP20.88■□□□□ 0.93
RABGGTA-213ENST00000560127 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
RABGGTA-213ENST00000560127 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
RABGGTA-213ENST00000560127 LRRC7Q96NW7 1537 aa20.85■□□□□ 0.93
RABGGTA-213ENST00000560127 CFAP65Q6ZU64 1925 aaKnown RBP20.85■□□□□ 0.93
RABGGTA-213ENST00000560127 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
RABGGTA-213ENST00000560127 SYNMO15061 1565 aa20.84■□□□□ 0.93
RABGGTA-213ENST00000560127 CCDC141Q6ZP82 1450 aa20.83■□□□□ 0.93
RABGGTA-213ENST00000560127 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
RABGGTA-213ENST00000560127 CEP162Q5TB80 1403 aa20.81■□□□□ 0.92
RABGGTA-213ENST00000560127 ZC3H13Q5T200 1668 aaKnown RBP20.81■□□□□ 0.92
RABGGTA-213ENST00000560127 XIRP1Q702N8 1843 aaKnown RBP20.8■□□□□ 0.92
RABGGTA-213ENST00000560127 RGS17Q9UGC6 210 aaPredicted RBP20.79■□□□□ 0.92
RABGGTA-213ENST00000560127 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
RABGGTA-213ENST00000560127 UBR1Q8IWV7 1749 aa20.75■□□□□ 0.91
RABGGTA-213ENST00000560127 ABCC3O15438 1527 aa20.75■□□□□ 0.91
RABGGTA-213ENST00000560127 RSPH4AQ5TD94 716 aa20.74■□□□□ 0.91
RABGGTA-213ENST00000560127 ARHGEF5Q12774 1597 aa20.73■□□□□ 0.91
RABGGTA-213ENST00000560127 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
RABGGTA-213ENST00000560127 NCOA2Q15596 1464 aa20.72■□□□□ 0.91
RABGGTA-213ENST00000560127 CEP152O94986 1710 aa20.71■□□□□ 0.91
RABGGTA-213ENST00000560127 SCAF11Q99590 1463 aaKnown RBP20.69■□□□□ 0.9
RABGGTA-213ENST00000560127 MROH1Q8NDA8 1641 aa20.68■□□□□ 0.9
RABGGTA-213ENST00000560127 EIF2AK4Q9P2K8 1649 aaKnown RBP20.67■□□□□ 0.9
RABGGTA-213ENST00000560127 TSPY4P0CV99 314 aa20.66■□□□□ 0.9
RABGGTA-213ENST00000560127 TSPY10P0CW01 314 aa20.66■□□□□ 0.9
RABGGTA-213ENST00000560127 MAST1Q9Y2H9 1570 aa20.65■□□□□ 0.9
RABGGTA-213ENST00000560127 ARHGAP23Q9P227 1491 aa20.65■□□□□ 0.9
RABGGTA-213ENST00000560127 LTKP29376 864 aa20.65■□□□□ 0.9
RABGGTA-213ENST00000560127 SLIT1O75093 1534 aa20.64■□□□□ 0.9
RABGGTA-213ENST00000560127 POTEAQ6S8J7 498 aa20.63■□□□□ 0.89
RABGGTA-213ENST00000560127 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
RABGGTA-213ENST00000560127 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
RABGGTA-213ENST00000560127 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
RABGGTA-213ENST00000560127 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.88
RABGGTA-213ENST00000560127 PIK3C2BO00750 1634 aa20.57■□□□□ 0.88
RABGGTA-213ENST00000560127 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
RABGGTA-213ENST00000560127 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
RABGGTA-213ENST00000560127 TMEM94Q12767 1356 aa20.53■□□□□ 0.88
RABGGTA-213ENST00000560127 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
RABGGTA-213ENST00000560127 DUOX2Q9NRD8 1548 aa20.53■□□□□ 0.88
RABGGTA-213ENST00000560127 PRDM15P57071 1507 aaPredicted RBP20.52■□□□□ 0.87
RABGGTA-213ENST00000560127 TMEM2Q9UHN6 1383 aa20.51■□□□□ 0.87
RABGGTA-213ENST00000560127 KDM5AP29375 1690 aaKnown RBP20.51■□□□□ 0.87
RABGGTA-213ENST00000560127 TET3O43151 1660 aa20.49■□□□□ 0.87
RABGGTA-213ENST00000560127 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
RABGGTA-213ENST00000560127 PHLPP1O60346 1717 aa20.48■□□□□ 0.87
RABGGTA-213ENST00000560127 KCNA6P17658 529 aa20.48■□□□□ 0.87
RABGGTA-213ENST00000560127 RBM33Q96EV2 1170 aaKnown RBP20.47■□□□□ 0.87
RABGGTA-213ENST00000560127 EFCAB6Q5THR3 1501 aa20.46■□□□□ 0.87
RABGGTA-213ENST00000560127 PROSER2Q86WR7 435 aaPredicted RBP20.45■□□□□ 0.86
RABGGTA-213ENST00000560127 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
RABGGTA-213ENST00000560127 CROCC2H7BZ55 1655 aa20.45■□□□□ 0.86
RABGGTA-213ENST00000560127 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
RABGGTA-213ENST00000560127 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
RABGGTA-213ENST00000560127 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
RABGGTA-213ENST00000560127 KIF15Q9NS87 1388 aa20.43■□□□□ 0.86
RABGGTA-213ENST00000560127 ERBINQ96RT1 1412 aa20.43■□□□□ 0.86
RABGGTA-213ENST00000560127 NKTRP30414 1462 aaKnown RBP20.42■□□□□ 0.86
RABGGTA-213ENST00000560127 IDI1Q13907 227 aa20.41■□□□□ 0.86
RABGGTA-213ENST00000560127 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
RABGGTA-213ENST00000560127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.864e-6■■□□□ 14.1
RABGGTA-213ENST00000560127 JCADQ9P266 1359 aa20.39■□□□□ 0.85
RABGGTA-213ENST00000560127 MYO5BQ9ULV0 1848 aa20.39■□□□□ 0.85
RABGGTA-213ENST00000560127 COL16A1Q07092 1604 aaPredicted RBP20.38■□□□□ 0.85
RABGGTA-213ENST00000560127 MSH6P52701 1360 aa20.38■□□□□ 0.85
RABGGTA-213ENST00000560127 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
RABGGTA-213ENST00000560127 RRP7BPQ9NSQ0 103 aa20.38■□□□□ 0.85
RABGGTA-213ENST00000560127 SLAIN2Q9P270 581 aa20.37■□□□□ 0.85
RABGGTA-213ENST00000560127 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
RABGGTA-213ENST00000560127 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
RABGGTA-213ENST00000560127 ABCC5O15440 1437 aa20.36■□□□□ 0.85
RABGGTA-213ENST00000560127 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
RABGGTA-213ENST00000560127 KANK1Q14678 1352 aa20.34■□□□□ 0.85
RABGGTA-213ENST00000560127 NOS1P29475 1434 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms