RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 MLECQ14165 292 aa17.17■□□□□ 0.34
TM2D3-208ENST00000559891 FOXD1Q16676 465 aa17.14■□□□□ 0.33
TM2D3-208ENST00000559891 NUP155O75694 1391 aa17.14■□□□□ 0.33
TM2D3-208ENST00000559891 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
TM2D3-208ENST00000559891 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
TM2D3-208ENST00000559891 DHX57Q6P158 1386 aaKnown RBP17.12■□□□□ 0.33
TM2D3-208ENST00000559891 PZPP20742 1482 aa17.12■□□□□ 0.33
TM2D3-208ENST00000559891 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
TM2D3-208ENST00000559891 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
TM2D3-208ENST00000559891 UNC13BO14795 1591 aa17.1■□□□□ 0.33
TM2D3-208ENST00000559891 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
TM2D3-208ENST00000559891 DEPDC5O75140 1603 aa17.09■□□□□ 0.33
TM2D3-208ENST00000559891 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
TM2D3-208ENST00000559891 AGLP35573 1532 aa17.08■□□□□ 0.32
TM2D3-208ENST00000559891 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
TM2D3-208ENST00000559891 FAM135AQ9P2D6 1515 aa17.07■□□□□ 0.32
TM2D3-208ENST00000559891 CCER1Q8TC90 406 aaPredicted RBP17.07■□□□□ 0.32
TM2D3-208ENST00000559891 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
TM2D3-208ENST00000559891 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
TM2D3-208ENST00000559891 PKD2Q13563 968 aa17.05■□□□□ 0.32
TM2D3-208ENST00000559891 CEP152O94986 1710 aa17.05■□□□□ 0.32
TM2D3-208ENST00000559891 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
TM2D3-208ENST00000559891 VWDEQ8N2E2 1590 aa17.04■□□□□ 0.32
TM2D3-208ENST00000559891 WASHC2CQ9Y4E1 1318 aa17.04■□□□□ 0.32
TM2D3-208ENST00000559891 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
TM2D3-208ENST00000559891 ABCC3O15438 1527 aa17.01■□□□□ 0.31
TM2D3-208ENST00000559891 KANK1Q14678 1352 aa17■□□□□ 0.31
TM2D3-208ENST00000559891 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
TM2D3-208ENST00000559891 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
TM2D3-208ENST00000559891 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
TM2D3-208ENST00000559891 E9PCH4 1651 aa16.98■□□□□ 0.31
TM2D3-208ENST00000559891 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
TM2D3-208ENST00000559891 CEBPAP49715 358 aaPredicted RBP16.96■□□□□ 0.31
TM2D3-208ENST00000559891 FBXO31Q5XUX0 539 aaPredicted RBP16.96■□□□□ 0.31
TM2D3-208ENST00000559891 NPATQ14207 1427 aa16.96■□□□□ 0.31
TM2D3-208ENST00000559891 TET3O43151 1660 aa16.96■□□□□ 0.31
TM2D3-208ENST00000559891 CAMSAP1Q5T5Y3 1602 aa16.95■□□□□ 0.3
TM2D3-208ENST00000559891 PLA2R1Q13018 1463 aa16.95■□□□□ 0.3
TM2D3-208ENST00000559891 EFCAB6Q5THR3 1501 aa16.95■□□□□ 0.3
TM2D3-208ENST00000559891 LMTK2Q8IWU2 1503 aa16.95■□□□□ 0.3
TM2D3-208ENST00000559891 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
TM2D3-208ENST00000559891 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
TM2D3-208ENST00000559891 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
TM2D3-208ENST00000559891 ZMYM3Q14202 1370 aa16.92■□□□□ 0.3
TM2D3-208ENST00000559891 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
TM2D3-208ENST00000559891 FER1L4A9Z1Z3 1794 aa16.91■□□□□ 0.3
TM2D3-208ENST00000559891 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
TM2D3-208ENST00000559891 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
TM2D3-208ENST00000559891 UGGT1Q9NYU2 1555 aa16.9■□□□□ 0.3
TM2D3-208ENST00000559891 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
TM2D3-208ENST00000559891 ADAMTSL3P82987 1691 aa16.9■□□□□ 0.3
TM2D3-208ENST00000559891 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
TM2D3-208ENST00000559891 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
TM2D3-208ENST00000559891 ARHGAP31Q2M1Z3 1444 aa16.86■□□□□ 0.29
TM2D3-208ENST00000559891 PTPRTO14522 1441 aa16.86■□□□□ 0.29
TM2D3-208ENST00000559891 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
TM2D3-208ENST00000559891 C3P01024 1663 aa16.85■□□□□ 0.29
TM2D3-208ENST00000559891 SYNMO15061 1565 aa16.84■□□□□ 0.29
TM2D3-208ENST00000559891 NOS1P29475 1434 aa16.84■□□□□ 0.29
TM2D3-208ENST00000559891 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
TM2D3-208ENST00000559891 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
TM2D3-208ENST00000559891 ERVK-7P63135 1459 aa16.83■□□□□ 0.28
TM2D3-208ENST00000559891 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
TM2D3-208ENST00000559891 CLTCL1P53675 1640 aa16.83■□□□□ 0.28
TM2D3-208ENST00000559891 TRPM2O94759 1503 aa16.82■□□□□ 0.28
TM2D3-208ENST00000559891 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
TM2D3-208ENST00000559891 IDI1Q13907 227 aa16.81■□□□□ 0.28
TM2D3-208ENST00000559891 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
TM2D3-208ENST00000559891 CCDC144AA2RUR9 1427 aa16.81■□□□□ 0.28
TM2D3-208ENST00000559891 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
TM2D3-208ENST00000559891 PTPRMP28827 1452 aa16.79■□□□□ 0.28
TM2D3-208ENST00000559891 SPATA31D1Q6ZQQ2 1576 aa16.79■□□□□ 0.28
TM2D3-208ENST00000559891 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
TM2D3-208ENST00000559891 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
TM2D3-208ENST00000559891 TNRQ92752 1358 aa16.76■□□□□ 0.27
TM2D3-208ENST00000559891 PIK3C2BO00750 1634 aa16.75■□□□□ 0.27
TM2D3-208ENST00000559891 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
TM2D3-208ENST00000559891 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
TM2D3-208ENST00000559891 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
TM2D3-208ENST00000559891 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
TM2D3-208ENST00000559891 MYO5BQ9ULV0 1848 aa16.72■□□□□ 0.27
TM2D3-208ENST00000559891 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
TM2D3-208ENST00000559891 SLC52A1Q9NWF4 448 aa16.72■□□□□ 0.27
TM2D3-208ENST00000559891 PELP1Q8IZL8 1130 aaKnown RBP16.71■□□□□ 0.27
TM2D3-208ENST00000559891 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
TM2D3-208ENST00000559891 DCAF11Q8TEB1 546 aa16.69■□□□□ 0.26
TM2D3-208ENST00000559891 KIF1BO60333 1816 aa16.69■□□□□ 0.26
TM2D3-208ENST00000559891 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
TM2D3-208ENST00000559891 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
TM2D3-208ENST00000559891 ADGRB3O60242 1522 aa16.68■□□□□ 0.26
TM2D3-208ENST00000559891 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
TM2D3-208ENST00000559891 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
TM2D3-208ENST00000559891 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
TM2D3-208ENST00000559891 NBPF8Q3BBV2 869 aa16.66■□□□□ 0.26
TM2D3-208ENST00000559891 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
TM2D3-208ENST00000559891 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
TM2D3-208ENST00000559891 ADGRF5Q8IZF2 1346 aa16.63■□□□□ 0.25
TM2D3-208ENST00000559891 NLRP1Q9C000 1473 aa16.63■□□□□ 0.25
TM2D3-208ENST00000559891 SETD1BQ9UPS6 1966 aaKnown RBP16.62■□□□□ 0.25
TM2D3-208ENST00000559891 CEP170BQ9Y4F5 1589 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms