RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
IDH3A-217ENST00000559889 MYO3AQ8NEV4 1616 aa14.13□□□□□ -0.15
IDH3A-217ENST00000559889 WASHC2CQ9Y4E1 1318 aa14.13□□□□□ -0.15
IDH3A-217ENST00000559889 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
IDH3A-217ENST00000559889 FBXO31Q5XUX0 539 aaPredicted RBP14.12□□□□□ -0.15
IDH3A-217ENST00000559889 CAMSAP1Q5T5Y3 1602 aa14.12□□□□□ -0.15
IDH3A-217ENST00000559889 PTPRTO14522 1441 aa14.12□□□□□ -0.15
IDH3A-217ENST00000559889 SHANK2Q9UPX8 1470 aa14.12□□□□□ -0.15
IDH3A-217ENST00000559889 RNF17Q9BXT8 1623 aaKnown RBP14.11□□□□□ -0.15
IDH3A-217ENST00000559889 ZNF142P52746 1687 aaPredicted RBP14.11□□□□□ -0.15
IDH3A-217ENST00000559889 PZPP20742 1482 aa14.11□□□□□ -0.15
IDH3A-217ENST00000559889 CEP170BQ9Y4F5 1589 aaPredicted RBP14.11□□□□□ -0.15
IDH3A-217ENST00000559889 CERKQ8TCT0 537 aa14.1□□□□□ -0.15
IDH3A-217ENST00000559889 DAPK1P53355 1430 aa14.1□□□□□ -0.15
IDH3A-217ENST00000559889 MROH1Q8NDA8 1641 aa14.09□□□□□ -0.15
IDH3A-217ENST00000559889 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
IDH3A-217ENST00000559889 CROCC2H7BZ55 1655 aa14.09□□□□□ -0.15
IDH3A-217ENST00000559889 DUOX2Q9NRD8 1548 aa14.09□□□□□ -0.15
IDH3A-217ENST00000559889 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
IDH3A-217ENST00000559889 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
IDH3A-217ENST00000559889 PLA2R1Q13018 1463 aa14.08□□□□□ -0.16
IDH3A-217ENST00000559889 ABCC3O15438 1527 aa14.08□□□□□ -0.16
IDH3A-217ENST00000559889 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
IDH3A-217ENST00000559889 TNRQ92752 1358 aa14.08□□□□□ -0.16
IDH3A-217ENST00000559889 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.16
IDH3A-217ENST00000559889 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
IDH3A-217ENST00000559889 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
IDH3A-217ENST00000559889 ERBINQ96RT1 1412 aa14.05□□□□□ -0.16
IDH3A-217ENST00000559889 PKD2Q13563 968 aa14.04□□□□□ -0.16
IDH3A-217ENST00000559889 ZC3H13Q5T200 1668 aaKnown RBP14.04□□□□□ -0.16
IDH3A-217ENST00000559889 CHIC2Q9UKJ5 165 aa14.04□□□□□ -0.16
IDH3A-217ENST00000559889 LTBP4Q8N2S1 1624 aa14.03□□□□□ -0.16
IDH3A-217ENST00000559889 PRDM15P57071 1507 aaPredicted RBP14.03□□□□□ -0.16
IDH3A-217ENST00000559889 SPATA31D1Q6ZQQ2 1576 aa14.02□□□□□ -0.16
IDH3A-217ENST00000559889 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
IDH3A-217ENST00000559889 NLRP1Q9C000 1473 aa14.02□□□□□ -0.17
IDH3A-217ENST00000559889 ADGRL2O95490 1459 aa14.01□□□□□ -0.17
IDH3A-217ENST00000559889 ERVK-7P63135 1459 aa14.01□□□□□ -0.17
IDH3A-217ENST00000559889 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
IDH3A-217ENST00000559889 DEPDC5O75140 1603 aa14□□□□□ -0.17
IDH3A-217ENST00000559889 CEP152O94986 1710 aa14□□□□□ -0.17
IDH3A-217ENST00000559889 ARHGAP31Q2M1Z3 1444 aa13.99□□□□□ -0.17
IDH3A-217ENST00000559889 ZNF335Q9H4Z2 1342 aaPredicted RBP13.99□□□□□ -0.17
IDH3A-217ENST00000559889 UGGT1Q9NYU2 1555 aa13.99□□□□□ -0.17
IDH3A-217ENST00000559889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
IDH3A-217ENST00000559889 NEURL4Q96JN8 1562 aa13.98□□□□□ -0.17
IDH3A-217ENST00000559889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.177e-8■■■■□ 25
IDH3A-217ENST00000559889 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
IDH3A-217ENST00000559889 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
IDH3A-217ENST00000559889 LMTK2Q8IWU2 1503 aa13.95□□□□□ -0.18
IDH3A-217ENST00000559889 ANKLE2Q86XL3 938 aa13.95□□□□□ -0.18
IDH3A-217ENST00000559889 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
IDH3A-217ENST00000559889 POLR1AO95602 1720 aaPredicted RBP13.94□□□□□ -0.18
IDH3A-217ENST00000559889 KANK1Q14678 1352 aa13.94□□□□□ -0.18
IDH3A-217ENST00000559889 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
IDH3A-217ENST00000559889 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
IDH3A-217ENST00000559889 MED14O60244 1454 aa13.93□□□□□ -0.18
IDH3A-217ENST00000559889 CFAP65Q6ZU64 1925 aaKnown RBP13.91□□□□□ -0.18
IDH3A-217ENST00000559889 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
IDH3A-217ENST00000559889 UBR1Q8IWV7 1749 aa13.91□□□□□ -0.18
IDH3A-217ENST00000559889 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
IDH3A-217ENST00000559889 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
IDH3A-217ENST00000559889 TRIM26Q12899 539 aaPredicted RBP13.89□□□□□ -0.19
IDH3A-217ENST00000559889 NOS1P29475 1434 aa13.89□□□□□ -0.19
IDH3A-217ENST00000559889 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
IDH3A-217ENST00000559889 SLIT1O75093 1534 aa13.88□□□□□ -0.19
IDH3A-217ENST00000559889 SYNMO15061 1565 aa13.87□□□□□ -0.19
IDH3A-217ENST00000559889 LTKP29376 864 aa13.87□□□□□ -0.19
IDH3A-217ENST00000559889 IDI1Q13907 227 aa13.87□□□□□ -0.19
IDH3A-217ENST00000559889 PIK3C2BO00750 1634 aa13.87□□□□□ -0.19
IDH3A-217ENST00000559889 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
IDH3A-217ENST00000559889 SCAF11Q99590 1463 aaKnown RBP13.86□□□□□ -0.19
IDH3A-217ENST00000559889 CPS1P31327 1500 aa13.85□□□□□ -0.19
IDH3A-217ENST00000559889 UNC13BO14795 1591 aa13.85□□□□□ -0.19
IDH3A-217ENST00000559889 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
IDH3A-217ENST00000559889 ITGAEP38570 1179 aa13.85□□□□□ -0.19
IDH3A-217ENST00000559889 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
IDH3A-217ENST00000559889 TXNDC2Q86VQ3 553 aa13.84□□□□□ -0.19
IDH3A-217ENST00000559889 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
IDH3A-217ENST00000559889 UBAP1LF5GYI3 381 aa13.83□□□□□ -0.2
IDH3A-217ENST00000559889 TET3O43151 1660 aa13.83□□□□□ -0.2
IDH3A-217ENST00000559889 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
IDH3A-217ENST00000559889 SLC52A1Q9NWF4 448 aa13.82□□□□□ -0.2
IDH3A-217ENST00000559889 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
IDH3A-217ENST00000559889 STRCP1A6NGW2 1772 aa13.8□□□□□ -0.2
IDH3A-217ENST00000559889 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
IDH3A-217ENST00000559889 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
IDH3A-217ENST00000559889 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
IDH3A-217ENST00000559889 GCC2Q8IWJ2 1684 aa13.79□□□□□ -0.2
IDH3A-217ENST00000559889 NUP155O75694 1391 aa13.78□□□□□ -0.2
IDH3A-217ENST00000559889 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
IDH3A-217ENST00000559889 E9PCH4 1651 aa13.78□□□□□ -0.2
IDH3A-217ENST00000559889 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
IDH3A-217ENST00000559889 HRCP23327 699 aa13.75□□□□□ -0.21
IDH3A-217ENST00000559889 ZFYVE9O95405 1425 aa13.75□□□□□ -0.21
IDH3A-217ENST00000559889 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
IDH3A-217ENST00000559889 NAIPQ13075 1403 aa13.74□□□□□ -0.21
IDH3A-217ENST00000559889 TOM1O60784 492 aa13.74□□□□□ -0.21
IDH3A-217ENST00000559889 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
IDH3A-217ENST00000559889 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms