RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 EIF2AK4Q9P2K8 1649 aaKnown RBP20.85■□□□□ 0.93
CHRNB4-204ENST00000559849 ERBINQ96RT1 1412 aa20.84■□□□□ 0.93
CHRNB4-204ENST00000559849 PTPRKQ15262 1439 aa20.84■□□□□ 0.93
CHRNB4-204ENST00000559849 ITGAEP38570 1179 aa20.84■□□□□ 0.93
CHRNB4-204ENST00000559849 SETD1BQ9UPS6 1966 aaKnown RBP20.83■□□□□ 0.93
CHRNB4-204ENST00000559849 MROH2AA6NES4 1674 aa20.83■□□□□ 0.93
CHRNB4-204ENST00000559849 C3P01024 1663 aa20.83■□□□□ 0.93
CHRNB4-204ENST00000559849 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.93
CHRNB4-204ENST00000559849 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
CHRNB4-204ENST00000559849 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
CHRNB4-204ENST00000559849 RNF17Q9BXT8 1623 aaKnown RBP20.8■□□□□ 0.92
CHRNB4-204ENST00000559849 ROCK1Q13464 1354 aa20.8■□□□□ 0.92
CHRNB4-204ENST00000559849 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
CHRNB4-204ENST00000559849 ANKRD50Q9ULJ7 1429 aa20.76■□□□□ 0.91
CHRNB4-204ENST00000559849 NPATQ14207 1427 aa20.75■□□□□ 0.91
CHRNB4-204ENST00000559849 LMTK3Q96Q04 1460 aa20.75■□□□□ 0.91
CHRNB4-204ENST00000559849 MROH1Q8NDA8 1641 aa20.74■□□□□ 0.91
CHRNB4-204ENST00000559849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHRNB4-204ENST00000559849 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
CHRNB4-204ENST00000559849 ZC3H13Q5T200 1668 aaKnown RBP20.72■□□□□ 0.91
CHRNB4-204ENST00000559849 DEPDC5O75140 1603 aa20.72■□□□□ 0.91
CHRNB4-204ENST00000559849 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
CHRNB4-204ENST00000559849 KANK1Q14678 1352 aa20.71■□□□□ 0.91
CHRNB4-204ENST00000559849 UHRF1BP1Q6BDS2 1440 aa20.71■□□□□ 0.91
CHRNB4-204ENST00000559849 ABCC3O15438 1527 aa20.71■□□□□ 0.91
CHRNB4-204ENST00000559849 PZPP20742 1482 aa20.69■□□□□ 0.9
CHRNB4-204ENST00000559849 FBXO31Q5XUX0 539 aaPredicted RBP20.68■□□□□ 0.9
CHRNB4-204ENST00000559849 HSPA2P54652 639 aa20.67■□□□□ 0.9
CHRNB4-204ENST00000559849 CEP152O94986 1710 aa20.67■□□□□ 0.9
CHRNB4-204ENST00000559849 CAMSAP1Q5T5Y3 1602 aa20.63■□□□□ 0.89
CHRNB4-204ENST00000559849 VWDEQ8N2E2 1590 aa20.63■□□□□ 0.89
CHRNB4-204ENST00000559849 ARHGAP31Q2M1Z3 1444 aa20.62■□□□□ 0.89
CHRNB4-204ENST00000559849 CFAP65Q6ZU64 1925 aaKnown RBP20.62■□□□□ 0.89
CHRNB4-204ENST00000559849 TNRQ92752 1358 aa20.62■□□□□ 0.89
CHRNB4-204ENST00000559849 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
CHRNB4-204ENST00000559849 NAIPQ13075 1403 aa20.6■□□□□ 0.89
CHRNB4-204ENST00000559849 UNC13BO14795 1591 aa20.59■□□□□ 0.89
CHRNB4-204ENST00000559849 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
CHRNB4-204ENST00000559849 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
CHRNB4-204ENST00000559849 SPATA31D1Q6ZQQ2 1576 aa20.57■□□□□ 0.88
CHRNB4-204ENST00000559849 ERVK-7P63135 1459 aa20.57■□□□□ 0.88
CHRNB4-204ENST00000559849 NUP155O75694 1391 aa20.56■□□□□ 0.88
CHRNB4-204ENST00000559849 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
CHRNB4-204ENST00000559849 ZNF142P52746 1687 aaPredicted RBP20.55■□□□□ 0.88
CHRNB4-204ENST00000559849 GCC2Q8IWJ2 1684 aa20.55■□□□□ 0.88
CHRNB4-204ENST00000559849 A2ML1A8K2U0 1454 aa20.54■□□□□ 0.88
CHRNB4-204ENST00000559849 NLRP1Q9C000 1473 aa20.54■□□□□ 0.88
CHRNB4-204ENST00000559849 EFCAB6Q5THR3 1501 aa20.53■□□□□ 0.88
CHRNB4-204ENST00000559849 TET3O43151 1660 aa20.52■□□□□ 0.88
CHRNB4-204ENST00000559849 IQGAP3Q86VI3 1631 aa20.52■□□□□ 0.88
CHRNB4-204ENST00000559849 RPRD2Q5VT52 1461 aaKnown RBP20.51■□□□□ 0.87
CHRNB4-204ENST00000559849 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
CHRNB4-204ENST00000559849 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
CHRNB4-204ENST00000559849 STRCQ7RTU9 1775 aa20.49■□□□□ 0.87
CHRNB4-204ENST00000559849 NOS1P29475 1434 aa20.47■□□□□ 0.87
CHRNB4-204ENST00000559849 UGGT1Q9NYU2 1555 aa20.47■□□□□ 0.87
CHRNB4-204ENST00000559849 TRIM52Q96A61 297 aa20.46■□□□□ 0.87
CHRNB4-204ENST00000559849 PLA2R1Q13018 1463 aa20.46■□□□□ 0.87
CHRNB4-204ENST00000559849 PKD2Q13563 968 aa20.45■□□□□ 0.86
CHRNB4-204ENST00000559849 SLC52A1Q9NWF4 448 aa20.45■□□□□ 0.86
CHRNB4-204ENST00000559849 IDI1Q13907 227 aa20.44■□□□□ 0.86
CHRNB4-204ENST00000559849 E9PCH4 1651 aa20.44■□□□□ 0.86
CHRNB4-204ENST00000559849 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
CHRNB4-204ENST00000559849 SYNMO15061 1565 aa20.42■□□□□ 0.86
CHRNB4-204ENST00000559849 STAG3Q9UJ98 1225 aa20.42■□□□□ 0.86
CHRNB4-204ENST00000559849 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
CHRNB4-204ENST00000559849 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
CHRNB4-204ENST00000559849 ANKLE2Q86XL3 938 aa20.41■□□□□ 0.86
CHRNB4-204ENST00000559849 PTPRTO14522 1441 aa20.4■□□□□ 0.86
CHRNB4-204ENST00000559849 UBR1Q8IWV7 1749 aa20.4■□□□□ 0.86
CHRNB4-204ENST00000559849 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
CHRNB4-204ENST00000559849 PIK3C2BO00750 1634 aa20.38■□□□□ 0.85
CHRNB4-204ENST00000559849 KDM5AP29375 1690 aaKnown RBP20.36■□□□□ 0.85
CHRNB4-204ENST00000559849 POLR1AO95602 1720 aaPredicted RBP20.34■□□□□ 0.85
CHRNB4-204ENST00000559849 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.84
CHRNB4-204ENST00000559849 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
CHRNB4-204ENST00000559849 TMEM2Q9UHN6 1383 aa20.32■□□□□ 0.84
CHRNB4-204ENST00000559849 SLIT1O75093 1534 aa20.32■□□□□ 0.84
CHRNB4-204ENST00000559849 SPHKAPQ2M3C7 1700 aa20.31■□□□□ 0.84
CHRNB4-204ENST00000559849 TXNDC2Q86VQ3 553 aa20.31■□□□□ 0.84
CHRNB4-204ENST00000559849 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
CHRNB4-204ENST00000559849 MPHOSPH9Q99550 1183 aa20.31■□□□□ 0.84
CHRNB4-204ENST00000559849 ADGRB3O60242 1522 aa20.31■□□□□ 0.84
CHRNB4-204ENST00000559849 HRCP23327 699 aa20.3■□□□□ 0.84
CHRNB4-204ENST00000559849 MED14O60244 1454 aa20.3■□□□□ 0.84
CHRNB4-204ENST00000559849 CHGAP10645 457 aaKnown RBP20.3■□□□□ 0.84
CHRNB4-204ENST00000559849 LTKP29376 864 aa20.3■□□□□ 0.84
CHRNB4-204ENST00000559849 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
CHRNB4-204ENST00000559849 NPHP4O75161 1426 aaPredicted RBP20.28■□□□□ 0.84
CHRNB4-204ENST00000559849 SCAF11Q99590 1463 aaKnown RBP20.27■□□□□ 0.84
CHRNB4-204ENST00000559849 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
CHRNB4-204ENST00000559849 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
CHRNB4-204ENST00000559849 MYO5BQ9ULV0 1848 aa20.26■□□□□ 0.83
CHRNB4-204ENST00000559849 TRPM2O94759 1503 aa20.26■□□□□ 0.83
CHRNB4-204ENST00000559849 FOXD1Q16676 465 aa20.25■□□□□ 0.83
CHRNB4-204ENST00000559849 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
CHRNB4-204ENST00000559849 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
CHRNB4-204ENST00000559849 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHRNB4-204ENST00000559849 RIMS2Q9UQ26 1411 aa20.2■□□□□ 0.82
CHRNB4-204ENST00000559849 CERKQ8TCT0 537 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms