RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 MLH3Q9UHC1 1453 aa14.25□□□□□ -0.13
TRIP4-208ENST00000559833 C9orf84Q5VXU9 1444 aa14.25□□□□□ -0.13
TRIP4-208ENST00000559833 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
TRIP4-208ENST00000559833 REREQ9P2R6 1566 aa14.24□□□□□ -0.13
TRIP4-208ENST00000559833 ABCC1P33527 1531 aa14.23□□□□□ -0.13
TRIP4-208ENST00000559833 TRAPPC8Q9Y2L5 1435 aa14.23□□□□□ -0.13
TRIP4-208ENST00000559833 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
TRIP4-208ENST00000559833 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
TRIP4-208ENST00000559833 GPATCH8Q9UKJ3 1502 aaKnown RBP14.21□□□□□ -0.13
TRIP4-208ENST00000559833 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.13
TRIP4-208ENST00000559833 MLECQ14165 292 aa14.21□□□□□ -0.13
TRIP4-208ENST00000559833 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
TRIP4-208ENST00000559833 POTEB2H3BUK9 544 aa14.2□□□□□ -0.14
TRIP4-208ENST00000559833 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
TRIP4-208ENST00000559833 AGLP35573 1532 aa14.19□□□□□ -0.14
TRIP4-208ENST00000559833 KIDINS220Q9ULH0 1771 aa14.19□□□□□ -0.14
TRIP4-208ENST00000559833 OTUD5Q96G74 571 aa14.17□□□□□ -0.14
TRIP4-208ENST00000559833 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
TRIP4-208ENST00000559833 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
TRIP4-208ENST00000559833 HSPA2P54652 639 aa14.15□□□□□ -0.14
TRIP4-208ENST00000559833 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
TRIP4-208ENST00000559833 PELP1Q8IZL8 1130 aaKnown RBP14.14□□□□□ -0.15
TRIP4-208ENST00000559833 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRIP4-208ENST00000559833 FBXO41Q8TF61 875 aa14.13□□□□□ -0.15
TRIP4-208ENST00000559833 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
TRIP4-208ENST00000559833 CEP162Q5TB80 1403 aa14.12□□□□□ -0.15
TRIP4-208ENST00000559833 SETD1BQ9UPS6 1966 aaKnown RBP14.12□□□□□ -0.15
TRIP4-208ENST00000559833 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
TRIP4-208ENST00000559833 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
TRIP4-208ENST00000559833 MYT1LQ9UL68 1186 aa14.11□□□□□ -0.15
TRIP4-208ENST00000559833 ZNF777Q9ULD5 760 aaPredicted RBP14.11□□□□□ -0.15
TRIP4-208ENST00000559833 PLEKHH2Q8IVE3 1493 aa14.11□□□□□ -0.15
TRIP4-208ENST00000559833 MTUS2Q5JR59 1369 aa14.1□□□□□ -0.15
TRIP4-208ENST00000559833 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
TRIP4-208ENST00000559833 PROM2Q8N271 834 aa14.1□□□□□ -0.15
TRIP4-208ENST00000559833 C3P01024 1663 aa14.09□□□□□ -0.15
TRIP4-208ENST00000559833 SPAG9O60271 1321 aaKnown RBP14.09□□□□□ -0.15
TRIP4-208ENST00000559833 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
TRIP4-208ENST00000559833 MBD5Q9P267 1494 aa14.08□□□□□ -0.16
TRIP4-208ENST00000559833 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
TRIP4-208ENST00000559833 INO80Q9ULG1 1556 aaPredicted RBP14.08□□□□□ -0.16
TRIP4-208ENST00000559833 MS4A3Q96HJ5 214 aa14.07□□□□□ -0.16
TRIP4-208ENST00000559833 PLXNC1O60486 1568 aa14.07□□□□□ -0.16
TRIP4-208ENST00000559833 ZNF644Q9H582 1327 aaPredicted RBP14.07□□□□□ -0.16
TRIP4-208ENST00000559833 CNTLNQ9NXG0 1405 aa14.07□□□□□ -0.16
TRIP4-208ENST00000559833 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
TRIP4-208ENST00000559833 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
TRIP4-208ENST00000559833 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
TRIP4-208ENST00000559833 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
TRIP4-208ENST00000559833 A2MP01023 1474 aa14.04□□□□□ -0.16
TRIP4-208ENST00000559833 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
TRIP4-208ENST00000559833 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
TRIP4-208ENST00000559833 RTEL1-TNFRSF6BF6WH68 1400 aa14.03□□□□□ -0.16
TRIP4-208ENST00000559833 SUPT6HQ7KZ85 1726 aaKnown RBP14.03□□□□□ -0.16
TRIP4-208ENST00000559833 ZMYM3Q14202 1370 aa14.02□□□□□ -0.17
TRIP4-208ENST00000559833 NCOA2Q15596 1464 aa14.01□□□□□ -0.17
TRIP4-208ENST00000559833 ESF1Q9H501 851 aaKnown RBP14.01□□□□□ -0.17
TRIP4-208ENST00000559833 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
TRIP4-208ENST00000559833 NPATQ14207 1427 aa14□□□□□ -0.17
TRIP4-208ENST00000559833 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
TRIP4-208ENST00000559833 RSPH4AQ5TD94 716 aa13.99□□□□□ -0.17
TRIP4-208ENST00000559833 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
TRIP4-208ENST00000559833 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
TRIP4-208ENST00000559833 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
TRIP4-208ENST00000559833 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
TRIP4-208ENST00000559833 PTPRTO14522 1441 aa13.98□□□□□ -0.17
TRIP4-208ENST00000559833 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
TRIP4-208ENST00000559833 METRNQ9UJH8 293 aa13.97□□□□□ -0.17
TRIP4-208ENST00000559833 LRRC9Q6ZRR7 1453 aa13.97□□□□□ -0.17
TRIP4-208ENST00000559833 CLTCQ00610 1675 aaKnown RBP13.97□□□□□ -0.17
TRIP4-208ENST00000559833 CAMSAP2Q08AD1 1489 aa13.96□□□□□ -0.17
TRIP4-208ENST00000559833 PTPRKQ15262 1439 aa13.96□□□□□ -0.18
TRIP4-208ENST00000559833 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
TRIP4-208ENST00000559833 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
TRIP4-208ENST00000559833 GGT6Q6P531 493 aa13.95□□□□□ -0.18
TRIP4-208ENST00000559833 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
TRIP4-208ENST00000559833 CCDC61Q9Y6R9 512 aa13.95□□□□□ -0.18
TRIP4-208ENST00000559833 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
TRIP4-208ENST00000559833 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
TRIP4-208ENST00000559833 KANK4Q5T7N3 995 aaPredicted RBP13.93□□□□□ -0.18
TRIP4-208ENST00000559833 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
TRIP4-208ENST00000559833 C7P10643 843 aa13.92□□□□□ -0.18
TRIP4-208ENST00000559833 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
TRIP4-208ENST00000559833 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
TRIP4-208ENST00000559833 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.18
TRIP4-208ENST00000559833 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.19
TRIP4-208ENST00000559833 KIF3BO15066 747 aa13.89□□□□□ -0.19
TRIP4-208ENST00000559833 MYO3AQ8NEV4 1616 aa13.89□□□□□ -0.19
TRIP4-208ENST00000559833 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
TRIP4-208ENST00000559833 MAST1Q9Y2H9 1570 aa13.88□□□□□ -0.19
TRIP4-208ENST00000559833 PLA2R1Q13018 1463 aa13.88□□□□□ -0.19
TRIP4-208ENST00000559833 POTEMA6NI47 508 aa13.88□□□□□ -0.19
TRIP4-208ENST00000559833 TSPY4P0CV99 314 aa13.88□□□□□ -0.19
TRIP4-208ENST00000559833 TSPY10P0CW01 314 aa13.88□□□□□ -0.19
TRIP4-208ENST00000559833 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
TRIP4-208ENST00000559833 CEP170BQ9Y4F5 1589 aaPredicted RBP13.88□□□□□ -0.19
TRIP4-208ENST00000559833 TCOF1Q13428 1488 aaKnown RBP13.87□□□□□ -0.19
TRIP4-208ENST00000559833 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
TRIP4-208ENST00000559833 MYOM3Q5VTT5 1437 aa13.86□□□□□ -0.19
TRIP4-208ENST00000559833 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms