RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 KIF3BO15066 747 aa29.81■■■□□ 2.36
LINS1-206ENST00000559827 PRDM15P57071 1507 aaPredicted RBP29.81■■■□□ 2.36
LINS1-206ENST00000559827 ANKRD50Q9ULJ7 1429 aa29.8■■■□□ 2.36
LINS1-206ENST00000559827 MROH2AA6NES4 1674 aa29.8■■■□□ 2.36
LINS1-206ENST00000559827 GCC2Q8IWJ2 1684 aa29.8■■■□□ 2.36
LINS1-206ENST00000559827 PTPRMP28827 1452 aa29.8■■■□□ 2.36
LINS1-206ENST00000559827 CNTLNQ9NXG0 1405 aa29.79■■■□□ 2.36
LINS1-206ENST00000559827 PPP6R1Q9UPN7 881 aa29.79■■■□□ 2.36
LINS1-206ENST00000559827 KDM5DQ9BY66 1539 aa29.76■■■□□ 2.36
LINS1-206ENST00000559827 ZC3H13Q5T200 1668 aaKnown RBP29.76■■■□□ 2.36
LINS1-206ENST00000559827 CLTCQ00610 1675 aaKnown RBP29.76■■■□□ 2.35
LINS1-206ENST00000559827 HFM1A2PYH4 1435 aa29.74■■■□□ 2.35
LINS1-206ENST00000559827 GGT6Q6P531 493 aa29.74■■■□□ 2.35
LINS1-206ENST00000559827 NAIPQ13075 1403 aa29.72■■■□□ 2.35
LINS1-206ENST00000559827 UNC13BO14795 1591 aa29.72■■■□□ 2.35
LINS1-206ENST00000559827 C3P01024 1663 aa29.71■■■□□ 2.35
LINS1-206ENST00000559827 VWDEQ8N2E2 1590 aa29.7■■■□□ 2.35
LINS1-206ENST00000559827 ABCC3O15438 1527 aa29.69■■■□□ 2.34
LINS1-206ENST00000559827 ESF1Q9H501 851 aaKnown RBP29.67■■■□□ 2.34
LINS1-206ENST00000559827 CEP152O94986 1710 aa29.65■■■□□ 2.34
LINS1-206ENST00000559827 LMTK2Q8IWU2 1503 aa29.64■■■□□ 2.34
LINS1-206ENST00000559827 CAMSAP1Q5T5Y3 1602 aa29.62■■■□□ 2.33
LINS1-206ENST00000559827 WASHC2CQ9Y4E1 1318 aa29.61■■■□□ 2.33
LINS1-206ENST00000559827 ZMYM3Q14202 1370 aa29.61■■■□□ 2.33
LINS1-206ENST00000559827 KANK1Q14678 1352 aa29.6■■■□□ 2.33
LINS1-206ENST00000559827 PZPP20742 1482 aa29.58■■■□□ 2.33
LINS1-206ENST00000559827 IQGAP3Q86VI3 1631 aa29.58■■■□□ 2.33
LINS1-206ENST00000559827 NPATQ14207 1427 aa29.55■■■□□ 2.32
LINS1-206ENST00000559827 ARHGAP31Q2M1Z3 1444 aa29.54■■■□□ 2.32
LINS1-206ENST00000559827 EFCAB6Q5THR3 1501 aa29.53■■■□□ 2.32
LINS1-206ENST00000559827 TET3O43151 1660 aa29.53■■■□□ 2.32
LINS1-206ENST00000559827 CEBPAP49715 358 aaPredicted RBP29.52■■■□□ 2.32
LINS1-206ENST00000559827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.52■■■□□ 2.32
LINS1-206ENST00000559827 SETD1BQ9UPS6 1966 aaKnown RBP29.5■■■□□ 2.31
LINS1-206ENST00000559827 PREX1Q8TCU6 1659 aa29.49■■■□□ 2.31
LINS1-206ENST00000559827 SETD5Q9C0A6 1442 aa29.48■■■□□ 2.31
LINS1-206ENST00000559827 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
LINS1-206ENST00000559827 NUP155O75694 1391 aa29.46■■■□□ 2.31
LINS1-206ENST00000559827 RPRD2Q5VT52 1461 aaKnown RBP29.44■■■□□ 2.3
LINS1-206ENST00000559827 ERVK-7P63135 1459 aa29.43■■■□□ 2.3
LINS1-206ENST00000559827 MYO3AQ8NEV4 1616 aa29.42■■■□□ 2.3
LINS1-206ENST00000559827 PLPPR3Q6T4P5 718 aa29.42■■■□□ 2.3
LINS1-206ENST00000559827 E9PCH4 1651 aa29.4■■■□□ 2.3
LINS1-206ENST00000559827 LMTK3Q96Q04 1460 aa29.4■■■□□ 2.3
LINS1-206ENST00000559827 ZNF142P52746 1687 aaPredicted RBP29.4■■■□□ 2.3
LINS1-206ENST00000559827 ACIN1Q9UKV3 1341 aaKnown RBP29.39■■■□□ 2.3
LINS1-206ENST00000559827 RAB3GAP2Q9H2M9 1393 aa29.38■■■□□ 2.29
LINS1-206ENST00000559827 UHRF1BP1Q6BDS2 1440 aa29.37■■■□□ 2.29
LINS1-206ENST00000559827 FBXO31Q5XUX0 539 aaPredicted RBP29.36■■■□□ 2.29
LINS1-206ENST00000559827 TNRQ92752 1358 aa29.36■■■□□ 2.29
LINS1-206ENST00000559827 TRIM26Q12899 539 aaPredicted RBP29.35■■■□□ 2.29
LINS1-206ENST00000559827 NOS1P29475 1434 aa29.34■■■□□ 2.29
LINS1-206ENST00000559827 CFAP65Q6ZU64 1925 aaKnown RBP29.33■■■□□ 2.29
LINS1-206ENST00000559827 CEP170BQ9Y4F5 1589 aaPredicted RBP29.32■■■□□ 2.28
LINS1-206ENST00000559827 NLRP1Q9C000 1473 aa29.32■■■□□ 2.28
LINS1-206ENST00000559827 SYNMO15061 1565 aa29.31■■■□□ 2.28
LINS1-206ENST00000559827 HRCP23327 699 aa29.3■■■□□ 2.28
LINS1-206ENST00000559827 A2ML1A8K2U0 1454 aa29.29■■■□□ 2.28
LINS1-206ENST00000559827 TRIM52Q96A61 297 aa29.27■■■□□ 2.28
LINS1-206ENST00000559827 SPHKAPQ2M3C7 1700 aa29.25■■■□□ 2.27
LINS1-206ENST00000559827 PIK3C2BO00750 1634 aa29.24■■■□□ 2.27
LINS1-206ENST00000559827 KDM5AP29375 1690 aaKnown RBP29.22■■■□□ 2.27
LINS1-206ENST00000559827 PTPRTO14522 1441 aa29.22■■■□□ 2.27
LINS1-206ENST00000559827 SLC4A1APQ9BWU0 796 aaKnown RBP29.2■■■□□ 2.26
LINS1-206ENST00000559827 TRPM2O94759 1503 aa29.19■■■□□ 2.26
LINS1-206ENST00000559827 UGGT1Q9NYU2 1555 aa29.18■■■□□ 2.26
LINS1-206ENST00000559827 UBR1Q8IWV7 1749 aa29.18■■■□□ 2.26
LINS1-206ENST00000559827 PKD2Q13563 968 aa29.16■■■□□ 2.26
LINS1-206ENST00000559827 MPHOSPH9Q99550 1183 aa29.15■■■□□ 2.26
LINS1-206ENST00000559827 SLC52A1Q9NWF4 448 aa29.15■■■□□ 2.26
LINS1-206ENST00000559827 PLA2R1Q13018 1463 aa29.14■■■□□ 2.26
LINS1-206ENST00000559827 ADGRB3O60242 1522 aa29.14■■■□□ 2.25
LINS1-206ENST00000559827 HSPA2P54652 639 aa29.11■■■□□ 2.25
LINS1-206ENST00000559827 IDI1Q13907 227 aa29.1■■■□□ 2.25
LINS1-206ENST00000559827 CLTCL1P53675 1640 aa29.09■■■□□ 2.25
LINS1-206ENST00000559827 TMEM131LA2VDJ0 1609 aa29.08■■■□□ 2.25
LINS1-206ENST00000559827 STRCQ7RTU9 1775 aa29.08■■■□□ 2.25
LINS1-206ENST00000559827 SLIT1O75093 1534 aa29.04■■■□□ 2.24
LINS1-206ENST00000559827 THEMISQ8N1K5 641 aaPredicted RBP29.04■■■□□ 2.24
LINS1-206ENST00000559827 ARHGAP23Q9P227 1491 aa29.04■■■□□ 2.24
LINS1-206ENST00000559827 POLR1AO95602 1720 aaPredicted RBP29.03■■■□□ 2.24
LINS1-206ENST00000559827 MYO5BQ9ULV0 1848 aa29.03■■■□□ 2.24
LINS1-206ENST00000559827 FOXD1Q16676 465 aa29■■■□□ 2.23
LINS1-206ENST00000559827 KIF1BO60333 1816 aa28.99■■■□□ 2.23
LINS1-206ENST00000559827 NEURL4Q96JN8 1562 aa28.97■■■□□ 2.23
LINS1-206ENST00000559827 TMEM2Q9UHN6 1383 aa28.96■■■□□ 2.23
LINS1-206ENST00000559827 CCDC144AA2RUR9 1427 aa28.94■■■□□ 2.22
LINS1-206ENST00000559827 STAG3Q9UJ98 1225 aa28.94■■■□□ 2.22
LINS1-206ENST00000559827 ANKRD30BQ9BXX2 1392 aa28.93■■■□□ 2.22
LINS1-206ENST00000559827 ZFYVE9O95405 1425 aa28.93■■■□□ 2.22
LINS1-206ENST00000559827 MED14O60244 1454 aa28.92■■■□□ 2.22
LINS1-206ENST00000559827 SCAF11Q99590 1463 aaKnown RBP28.91■■■□□ 2.22
LINS1-206ENST00000559827 PCGF6Q9BYE7 350 aa28.9■■■□□ 2.22
LINS1-206ENST00000559827 ANKLE2Q86XL3 938 aa28.89■■■□□ 2.22
LINS1-206ENST00000559827 NCKAP5LQ9HCH0 1330 aa28.87■■■□□ 2.21
LINS1-206ENST00000559827 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
LINS1-206ENST00000559827 DHX57Q6P158 1386 aaKnown RBP28.86■■■□□ 2.21
LINS1-206ENST00000559827 SPATA31E1Q6ZUB1 1445 aa28.86■■■□□ 2.21
LINS1-206ENST00000559827 RIMS2Q9UQ26 1411 aa28.86■■■□□ 2.21
LINS1-206ENST00000559827 DMRT2Q9Y5R5 561 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms