RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 EIF2AK4Q9P2K8 1649 aaKnown RBP25.47■■□□□ 1.67
CHRNA3-206ENST00000559658 DHX29Q7Z478 1369 aaKnown RBP25.46■■□□□ 1.67
CHRNA3-206ENST00000559658 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
CHRNA3-206ENST00000559658 FAM135AQ9P2D6 1515 aa25.46■■□□□ 1.67
CHRNA3-206ENST00000559658 MROH1Q8NDA8 1641 aa25.46■■□□□ 1.67
CHRNA3-206ENST00000559658 SIN3AQ96ST3 1273 aa25.45■■□□□ 1.66
CHRNA3-206ENST00000559658 IQGAP3Q86VI3 1631 aa25.44■■□□□ 1.66
CHRNA3-206ENST00000559658 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
CHRNA3-206ENST00000559658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.66
CHRNA3-206ENST00000559658 SIGLEC1Q9BZZ2 1709 aa25.41■■□□□ 1.66
CHRNA3-206ENST00000559658 KIF3BO15066 747 aa25.38■■□□□ 1.65
CHRNA3-206ENST00000559658 RNF17Q9BXT8 1623 aaKnown RBP25.38■■□□□ 1.65
CHRNA3-206ENST00000559658 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
CHRNA3-206ENST00000559658 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
CHRNA3-206ENST00000559658 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
CHRNA3-206ENST00000559658 NEUROD1Q13562 356 aa25.36■■□□□ 1.65
CHRNA3-206ENST00000559658 PKD2Q13563 968 aa25.36■■□□□ 1.65
CHRNA3-206ENST00000559658 VWDEQ8N2E2 1590 aa25.35■■□□□ 1.65
CHRNA3-206ENST00000559658 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
CHRNA3-206ENST00000559658 ANKRD30BQ9BXX2 1392 aa25.33■■□□□ 1.65
CHRNA3-206ENST00000559658 CEP152O94986 1710 aa25.32■■□□□ 1.64
CHRNA3-206ENST00000559658 E9PCH4 1651 aa25.3■■□□□ 1.64
CHRNA3-206ENST00000559658 ATP10AO60312 1499 aa25.3■■□□□ 1.64
CHRNA3-206ENST00000559658 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
CHRNA3-206ENST00000559658 TET3O43151 1660 aa25.27■■□□□ 1.64
CHRNA3-206ENST00000559658 GGT6Q6P531 493 aa25.24■■□□□ 1.63
CHRNA3-206ENST00000559658 PLA2R1Q13018 1463 aa25.22■■□□□ 1.63
CHRNA3-206ENST00000559658 RPRD2Q5VT52 1461 aaKnown RBP25.2■■□□□ 1.63
CHRNA3-206ENST00000559658 KANK1Q14678 1352 aa25.2■■□□□ 1.63
CHRNA3-206ENST00000559658 ABCC3O15438 1527 aa25.2■■□□□ 1.63
CHRNA3-206ENST00000559658 EFCAB6Q5THR3 1501 aa25.2■■□□□ 1.63
CHRNA3-206ENST00000559658 AGLP35573 1532 aa25.19■■□□□ 1.62
CHRNA3-206ENST00000559658 LMTK2Q8IWU2 1503 aa25.19■■□□□ 1.62
CHRNA3-206ENST00000559658 CAMSAP1Q5T5Y3 1602 aa25.17■■□□□ 1.62
CHRNA3-206ENST00000559658 SPHKAPQ2M3C7 1700 aa25.16■■□□□ 1.62
CHRNA3-206ENST00000559658 TONSLQ96HA7 1378 aa25.15■■□□□ 1.62
CHRNA3-206ENST00000559658 ZC3H13Q5T200 1668 aaKnown RBP25.12■■□□□ 1.61
CHRNA3-206ENST00000559658 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
CHRNA3-206ENST00000559658 NPATQ14207 1427 aa25.1■■□□□ 1.61
CHRNA3-206ENST00000559658 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
CHRNA3-206ENST00000559658 TRPM2O94759 1503 aa25.09■■□□□ 1.61
CHRNA3-206ENST00000559658 WASHC2CQ9Y4E1 1318 aa25.09■■□□□ 1.61
CHRNA3-206ENST00000559658 MLECQ14165 292 aa25.09■■□□□ 1.61
CHRNA3-206ENST00000559658 CLTCL1P53675 1640 aa25.08■■□□□ 1.61
CHRNA3-206ENST00000559658 CLTCQ00610 1675 aaKnown RBP25.08■■□□□ 1.61
CHRNA3-206ENST00000559658 CCDC144AA2RUR9 1427 aa25.07■■□□□ 1.6
CHRNA3-206ENST00000559658 PTPRTO14522 1441 aa25.07■■□□□ 1.6
CHRNA3-206ENST00000559658 L3MBTL2Q969R5 705 aa25.05■■□□□ 1.6
CHRNA3-206ENST00000559658 TIMELESSQ9UNS1 1208 aa25.02■■□□□ 1.6
CHRNA3-206ENST00000559658 PPP1R15AO75807 674 aaPredicted RBP25.01■■□□□ 1.59
CHRNA3-206ENST00000559658 ARID4BQ4LE39 1312 aaPredicted RBP25■■□□□ 1.59
CHRNA3-206ENST00000559658 SYNMO15061 1565 aa24.99■■□□□ 1.59
CHRNA3-206ENST00000559658 PREX1Q8TCU6 1659 aa24.97■■□□□ 1.59
CHRNA3-206ENST00000559658 MROH2AA6NES4 1674 aa24.96■■□□□ 1.59
CHRNA3-206ENST00000559658 ARHGAP31Q2M1Z3 1444 aa24.96■■□□□ 1.59
CHRNA3-206ENST00000559658 NOS1P29475 1434 aa24.94■■□□□ 1.58
CHRNA3-206ENST00000559658 SPATA31E1Q6ZUB1 1445 aa24.93■■□□□ 1.58
CHRNA3-206ENST00000559658 PIK3C2BO00750 1634 aa24.91■■□□□ 1.58
CHRNA3-206ENST00000559658 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
CHRNA3-206ENST00000559658 RGL3Q3MIN7 710 aa24.91■■□□□ 1.58
CHRNA3-206ENST00000559658 NBPF8Q3BBV2 869 aa24.9■■□□□ 1.58
CHRNA3-206ENST00000559658 FBXO31Q5XUX0 539 aaPredicted RBP24.89■■□□□ 1.58
CHRNA3-206ENST00000559658 KIF1BO60333 1816 aa24.89■■□□□ 1.58
CHRNA3-206ENST00000559658 FER1L4A9Z1Z3 1794 aa24.89■■□□□ 1.57
CHRNA3-206ENST00000559658 ERVK-7P63135 1459 aa24.88■■□□□ 1.57
CHRNA3-206ENST00000559658 PPP6R1Q9UPN7 881 aa24.87■■□□□ 1.57
CHRNA3-206ENST00000559658 ADGRB3O60242 1522 aa24.85■■□□□ 1.57
CHRNA3-206ENST00000559658 DCAF11Q8TEB1 546 aa24.85■■□□□ 1.57
CHRNA3-206ENST00000559658 KDM2AQ9Y2K7 1162 aa24.84■■□□□ 1.57
CHRNA3-206ENST00000559658 SPATA31D1Q6ZQQ2 1576 aa24.84■■□□□ 1.57
CHRNA3-206ENST00000559658 ZNF326Q5BKZ1 582 aaKnown RBP24.83■■□□□ 1.57
CHRNA3-206ENST00000559658 ZMYM3Q14202 1370 aa24.82■■□□□ 1.56
CHRNA3-206ENST00000559658 MYO5BQ9ULV0 1848 aa24.82■■□□□ 1.56
CHRNA3-206ENST00000559658 MADDQ8WXG6 1647 aa24.81■■□□□ 1.56
CHRNA3-206ENST00000559658 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
CHRNA3-206ENST00000559658 NEURL4Q96JN8 1562 aa24.8■■□□□ 1.56
CHRNA3-206ENST00000559658 C3P01024 1663 aa24.8■■□□□ 1.56
CHRNA3-206ENST00000559658 UHRF1BP1Q6BDS2 1440 aa24.79■■□□□ 1.56
CHRNA3-206ENST00000559658 ESF1Q9H501 851 aaKnown RBP24.79■■□□□ 1.56
CHRNA3-206ENST00000559658 PRAG1Q86YV5 1406 aa24.77■■□□□ 1.56
CHRNA3-206ENST00000559658 CHGAP10645 457 aaKnown RBP24.76■■□□□ 1.55
CHRNA3-206ENST00000559658 IDI1Q13907 227 aa24.76■■□□□ 1.55
CHRNA3-206ENST00000559658 RIMS1Q86UR5 1692 aaKnown RBP24.76■■□□□ 1.55
CHRNA3-206ENST00000559658 TMEM131LA2VDJ0 1609 aa24.75■■□□□ 1.55
CHRNA3-206ENST00000559658 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
CHRNA3-206ENST00000559658 CEBPAP49715 358 aaPredicted RBP24.75■■□□□ 1.55
CHRNA3-206ENST00000559658 ADAMTSL3P82987 1691 aa24.74■■□□□ 1.55
CHRNA3-206ENST00000559658 PPLO60437 1756 aa24.74■■□□□ 1.55
CHRNA3-206ENST00000559658 HIRIP3Q9BW71 556 aaPredicted RBP24.73■■□□□ 1.55
CHRNA3-206ENST00000559658 ZNF316A6NFI3 1004 aaPredicted RBP24.72■■□□□ 1.55
CHRNA3-206ENST00000559658 RALGAPBQ86X10 1494 aa24.72■■□□□ 1.55
CHRNA3-206ENST00000559658 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.55
CHRNA3-206ENST00000559658 NEXMIFQ5QGS0 1516 aa24.69■■□□□ 1.54
CHRNA3-206ENST00000559658 SLC52A1Q9NWF4 448 aa24.68■■□□□ 1.54
CHRNA3-206ENST00000559658 MYOM2P54296 1465 aa24.66■■□□□ 1.54
CHRNA3-206ENST00000559658 TNRQ92752 1358 aa24.65■■□□□ 1.54
CHRNA3-206ENST00000559658 ADGRF5Q8IZF2 1346 aa24.65■■□□□ 1.54
CHRNA3-206ENST00000559658 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.53
CHRNA3-206ENST00000559658 A2ML1A8K2U0 1454 aa24.62■■□□□ 1.53
CHRNA3-206ENST00000559658 NBPF1Q3BBV0 1214 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms