RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
SPG11-216ENST00000559347 DUOX2Q9NRD8 1548 aa17.1■□□□□ 0.33
SPG11-216ENST00000559347 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
SPG11-216ENST00000559347 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
SPG11-216ENST00000559347 NPATQ14207 1427 aa17.09■□□□□ 0.33
SPG11-216ENST00000559347 STRCQ7RTU9 1775 aa17.07■□□□□ 0.32
SPG11-216ENST00000559347 CEP152O94986 1710 aa17.07■□□□□ 0.32
SPG11-216ENST00000559347 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
SPG11-216ENST00000559347 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
SPG11-216ENST00000559347 GGT6Q6P531 493 aa17.06■□□□□ 0.32
SPG11-216ENST00000559347 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
SPG11-216ENST00000559347 HSPA2P54652 639 aa17.05■□□□□ 0.32
SPG11-216ENST00000559347 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
SPG11-216ENST00000559347 KIF3BO15066 747 aa17.04■□□□□ 0.32
SPG11-216ENST00000559347 PPP6R1Q9UPN7 881 aa17.04■□□□□ 0.32
SPG11-216ENST00000559347 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
SPG11-216ENST00000559347 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
SPG11-216ENST00000559347 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
SPG11-216ENST00000559347 CEP170BQ9Y4F5 1589 aaPredicted RBP17.03■□□□□ 0.32
SPG11-216ENST00000559347 ABCC3O15438 1527 aa17.03■□□□□ 0.32
SPG11-216ENST00000559347 ADGRL2O95490 1459 aa17.03■□□□□ 0.32
SPG11-216ENST00000559347 PZPP20742 1482 aa17.02■□□□□ 0.32
SPG11-216ENST00000559347 NCOA1Q15788 1441 aa16.96■□□□□ 0.31
SPG11-216ENST00000559347 ANKRD30AQ9BXX3 1397 aa16.96■□□□□ 0.31
SPG11-216ENST00000559347 SPATA31D1Q6ZQQ2 1576 aa16.96■□□□□ 0.31
SPG11-216ENST00000559347 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
SPG11-216ENST00000559347 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
SPG11-216ENST00000559347 A2ML1A8K2U0 1454 aa16.94■□□□□ 0.3
SPG11-216ENST00000559347 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
SPG11-216ENST00000559347 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
SPG11-216ENST00000559347 RRP7BPQ9NSQ0 103 aa16.93■□□□□ 0.3
SPG11-216ENST00000559347 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
SPG11-216ENST00000559347 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
SPG11-216ENST00000559347 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
SPG11-216ENST00000559347 TNRQ92752 1358 aa16.91■□□□□ 0.3
SPG11-216ENST00000559347 UNC13BO14795 1591 aa16.91■□□□□ 0.3
SPG11-216ENST00000559347 ERVK-7P63135 1459 aa16.91■□□□□ 0.3
SPG11-216ENST00000559347 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
SPG11-216ENST00000559347 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
SPG11-216ENST00000559347 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
SPG11-216ENST00000559347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPG11-216ENST00000559347 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
SPG11-216ENST00000559347 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
SPG11-216ENST00000559347 PTPRTO14522 1441 aa16.87■□□□□ 0.29
SPG11-216ENST00000559347 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
SPG11-216ENST00000559347 GCC2Q8IWJ2 1684 aa16.87■□□□□ 0.29
SPG11-216ENST00000559347 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
SPG11-216ENST00000559347 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
SPG11-216ENST00000559347 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
SPG11-216ENST00000559347 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
SPG11-216ENST00000559347 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
SPG11-216ENST00000559347 TET3O43151 1660 aa16.86■□□□□ 0.29
SPG11-216ENST00000559347 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
SPG11-216ENST00000559347 KANK1Q14678 1352 aa16.84■□□□□ 0.29
SPG11-216ENST00000559347 IQGAP3Q86VI3 1631 aa16.83■□□□□ 0.28
SPG11-216ENST00000559347 KDM5AP29375 1690 aaKnown RBP16.82■□□□□ 0.28
SPG11-216ENST00000559347 PIK3C2BO00750 1634 aa16.82■□□□□ 0.28
SPG11-216ENST00000559347 SYNMO15061 1565 aa16.82■□□□□ 0.28
SPG11-216ENST00000559347 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
SPG11-216ENST00000559347 LTBP4Q8N2S1 1624 aa16.8■□□□□ 0.28
SPG11-216ENST00000559347 E9PCH4 1651 aa16.79■□□□□ 0.28
SPG11-216ENST00000559347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPG11-216ENST00000559347 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
SPG11-216ENST00000559347 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
SPG11-216ENST00000559347 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
SPG11-216ENST00000559347 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
SPG11-216ENST00000559347 PKD2Q13563 968 aa16.76■□□□□ 0.27
SPG11-216ENST00000559347 NOS1P29475 1434 aa16.75■□□□□ 0.27
SPG11-216ENST00000559347 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
SPG11-216ENST00000559347 ITGAEP38570 1179 aa16.74■□□□□ 0.27
SPG11-216ENST00000559347 ADGRB3O60242 1522 aa16.74■□□□□ 0.27
SPG11-216ENST00000559347 SLIT1O75093 1534 aa16.74■□□□□ 0.27
SPG11-216ENST00000559347 MED14O60244 1454 aa16.73■□□□□ 0.27
SPG11-216ENST00000559347 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
SPG11-216ENST00000559347 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
SPG11-216ENST00000559347 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
SPG11-216ENST00000559347 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
SPG11-216ENST00000559347 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
SPG11-216ENST00000559347 IQSEC2Q5JU85 1478 aa16.69■□□□□ 0.26
SPG11-216ENST00000559347 NPHP4O75161 1426 aaPredicted RBP16.69■□□□□ 0.26
SPG11-216ENST00000559347 NAIPQ13075 1403 aa16.69■□□□□ 0.26
SPG11-216ENST00000559347 SCAF11Q99590 1463 aaKnown RBP16.68■□□□□ 0.26
SPG11-216ENST00000559347 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
SPG11-216ENST00000559347 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
SPG11-216ENST00000559347 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
SPG11-216ENST00000559347 TMEM131LA2VDJ0 1609 aa16.67■□□□□ 0.26
SPG11-216ENST00000559347 ADRA2BP18089 450 aa16.66■□□□□ 0.26
SPG11-216ENST00000559347 ANKLE2Q86XL3 938 aa16.66■□□□□ 0.26
SPG11-216ENST00000559347 NUP155O75694 1391 aa16.64■□□□□ 0.26
SPG11-216ENST00000559347 CPS1P31327 1500 aa16.64■□□□□ 0.25
SPG11-216ENST00000559347 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
SPG11-216ENST00000559347 IDI1Q13907 227 aa16.62■□□□□ 0.25
SPG11-216ENST00000559347 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
SPG11-216ENST00000559347 LTKP29376 864 aa16.58■□□□□ 0.24
SPG11-216ENST00000559347 ZFYVE9O95405 1425 aa16.58■□□□□ 0.24
SPG11-216ENST00000559347 TRPM2O94759 1503 aa16.58■□□□□ 0.24
SPG11-216ENST00000559347 CLTCL1P53675 1640 aa16.58■□□□□ 0.24
SPG11-216ENST00000559347 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
SPG11-216ENST00000559347 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
SPG11-216ENST00000559347 KIF1BO60333 1816 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms