RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PRDM15P57071 1507 aaPredicted RBP22.35■■□□□ 1.17
SNRPA1-207ENST00000559309 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
SNRPA1-207ENST00000559309 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
SNRPA1-207ENST00000559309 FAM135AQ9P2D6 1515 aa22.32■■□□□ 1.16
SNRPA1-207ENST00000559309 KDM5DQ9BY66 1539 aa22.31■■□□□ 1.16
SNRPA1-207ENST00000559309 HRCP23327 699 aa22.3■■□□□ 1.16
SNRPA1-207ENST00000559309 ADAMTSL3P82987 1691 aa22.3■■□□□ 1.16
SNRPA1-207ENST00000559309 LMTK2Q8IWU2 1503 aa22.26■■□□□ 1.15
SNRPA1-207ENST00000559309 RAB3GAP2Q9H2M9 1393 aa22.26■■□□□ 1.15
SNRPA1-207ENST00000559309 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
SNRPA1-207ENST00000559309 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
SNRPA1-207ENST00000559309 KIF3BO15066 747 aa22.25■■□□□ 1.15
SNRPA1-207ENST00000559309 ZC3H13Q5T200 1668 aaKnown RBP22.25■■□□□ 1.15
SNRPA1-207ENST00000559309 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
SNRPA1-207ENST00000559309 ABCC3O15438 1527 aa22.21■■□□□ 1.15
SNRPA1-207ENST00000559309 MROH2AA6NES4 1674 aa22.2■■□□□ 1.15
SNRPA1-207ENST00000559309 PZPP20742 1482 aa22.19■■□□□ 1.14
SNRPA1-207ENST00000559309 FER1L4A9Z1Z3 1794 aa22.19■■□□□ 1.14
SNRPA1-207ENST00000559309 CEP152O94986 1710 aa22.18■■□□□ 1.14
SNRPA1-207ENST00000559309 MADDQ8WXG6 1647 aa22.18■■□□□ 1.14
SNRPA1-207ENST00000559309 PTPRMP28827 1452 aa22.18■■□□□ 1.14
SNRPA1-207ENST00000559309 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
SNRPA1-207ENST00000559309 TET3O43151 1660 aa22.17■■□□□ 1.14
SNRPA1-207ENST00000559309 CLTCQ00610 1675 aaKnown RBP22.16■■□□□ 1.14
SNRPA1-207ENST00000559309 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
SNRPA1-207ENST00000559309 CNTLNQ9NXG0 1405 aa22.15■■□□□ 1.14
SNRPA1-207ENST00000559309 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
SNRPA1-207ENST00000559309 GGT6Q6P531 493 aa22.15■■□□□ 1.14
SNRPA1-207ENST00000559309 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
SNRPA1-207ENST00000559309 EFCAB6Q5THR3 1501 aa22.14■■□□□ 1.13
SNRPA1-207ENST00000559309 NUP155O75694 1391 aa22.12■■□□□ 1.13
SNRPA1-207ENST00000559309 KANK1Q14678 1352 aa22.12■■□□□ 1.13
SNRPA1-207ENST00000559309 RIMS1Q86UR5 1692 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-207ENST00000559309 MLECQ14165 292 aa22.09■■□□□ 1.13
SNRPA1-207ENST00000559309 E9PCH4 1651 aa22.09■■□□□ 1.13
SNRPA1-207ENST00000559309 C3P01024 1663 aa22.08■■□□□ 1.13
SNRPA1-207ENST00000559309 RPRD2Q5VT52 1461 aaKnown RBP22.08■■□□□ 1.12
SNRPA1-207ENST00000559309 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
SNRPA1-207ENST00000559309 NPATQ14207 1427 aa22.06■■□□□ 1.12
SNRPA1-207ENST00000559309 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
SNRPA1-207ENST00000559309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.122e-7■□□□□ 8
SNRPA1-207ENST00000559309 SPATA31D1Q6ZQQ2 1576 aa22.04■■□□□ 1.12
SNRPA1-207ENST00000559309 FBXO41Q8TF61 875 aa22.03■■□□□ 1.12
SNRPA1-207ENST00000559309 PREX1Q8TCU6 1659 aa22.02■■□□□ 1.12
SNRPA1-207ENST00000559309 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
SNRPA1-207ENST00000559309 PTPRTO14522 1441 aa22.02■■□□□ 1.12
SNRPA1-207ENST00000559309 NOS1P29475 1434 aa22.02■■□□□ 1.12
SNRPA1-207ENST00000559309 LMTK3Q96Q04 1460 aa22.01■■□□□ 1.11
SNRPA1-207ENST00000559309 TRIM52Q96A61 297 aa22■■□□□ 1.11
SNRPA1-207ENST00000559309 DHX57Q6P158 1386 aaKnown RBP21.99■■□□□ 1.11
SNRPA1-207ENST00000559309 ERVK-7P63135 1459 aa21.98■■□□□ 1.11
SNRPA1-207ENST00000559309 PLA2R1Q13018 1463 aa21.98■■□□□ 1.11
SNRPA1-207ENST00000559309 SYNMO15061 1565 aa21.97■■□□□ 1.11
SNRPA1-207ENST00000559309 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
SNRPA1-207ENST00000559309 SPHKAPQ2M3C7 1700 aa21.97■■□□□ 1.11
SNRPA1-207ENST00000559309 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
SNRPA1-207ENST00000559309 TRPM2O94759 1503 aa21.95■■□□□ 1.1
SNRPA1-207ENST00000559309 PKD2Q13563 968 aa21.94■■□□□ 1.1
SNRPA1-207ENST00000559309 ESF1Q9H501 851 aaKnown RBP21.94■■□□□ 1.1
SNRPA1-207ENST00000559309 ANKRD30BQ9BXX2 1392 aa21.91■■□□□ 1.1
SNRPA1-207ENST00000559309 CEBPAP49715 358 aaPredicted RBP21.91■■□□□ 1.1
SNRPA1-207ENST00000559309 FBXO31Q5XUX0 539 aaPredicted RBP21.91■■□□□ 1.1
SNRPA1-207ENST00000559309 SETD1BQ9UPS6 1966 aaKnown RBP21.9■■□□□ 1.1
SNRPA1-207ENST00000559309 CFAP65Q6ZU64 1925 aaKnown RBP21.89■■□□□ 1.09
SNRPA1-207ENST00000559309 KDM5AP29375 1690 aaKnown RBP21.87■■□□□ 1.09
SNRPA1-207ENST00000559309 ZNF142P52746 1687 aaPredicted RBP21.86■■□□□ 1.09
SNRPA1-207ENST00000559309 CLTCL1P53675 1640 aa21.86■■□□□ 1.09
SNRPA1-207ENST00000559309 MYO3AQ8NEV4 1616 aa21.86■■□□□ 1.09
SNRPA1-207ENST00000559309 TNRQ92752 1358 aa21.86■■□□□ 1.09
SNRPA1-207ENST00000559309 NLRP1Q9C000 1473 aa21.85■■□□□ 1.09
SNRPA1-207ENST00000559309 FOXD1Q16676 465 aa21.85■■□□□ 1.09
SNRPA1-207ENST00000559309 NEURL4Q96JN8 1562 aa21.85■■□□□ 1.09
SNRPA1-207ENST00000559309 UGGT1Q9NYU2 1555 aa21.84■■□□□ 1.09
SNRPA1-207ENST00000559309 HSPA2P54652 639 aa21.84■■□□□ 1.09
SNRPA1-207ENST00000559309 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
SNRPA1-207ENST00000559309 TMEM131LA2VDJ0 1609 aa21.8■■□□□ 1.08
SNRPA1-207ENST00000559309 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
SNRPA1-207ENST00000559309 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
SNRPA1-207ENST00000559309 UBR1Q8IWV7 1749 aa21.79■■□□□ 1.08
SNRPA1-207ENST00000559309 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
SNRPA1-207ENST00000559309 ADGRB3O60242 1522 aa21.77■■□□□ 1.08
SNRPA1-207ENST00000559309 IDI1Q13907 227 aa21.77■■□□□ 1.08
SNRPA1-207ENST00000559309 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
SNRPA1-207ENST00000559309 SPATA31E1Q6ZUB1 1445 aa21.76■■□□□ 1.07
SNRPA1-207ENST00000559309 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
SNRPA1-207ENST00000559309 KIF1BO60333 1816 aa21.75■■□□□ 1.07
SNRPA1-207ENST00000559309 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
SNRPA1-207ENST00000559309 MYO5BQ9ULV0 1848 aa21.72■■□□□ 1.07
SNRPA1-207ENST00000559309 ARHGAP23Q9P227 1491 aa21.71■■□□□ 1.07
SNRPA1-207ENST00000559309 CERKQ8TCT0 537 aa21.7■■□□□ 1.06
SNRPA1-207ENST00000559309 SLIT1O75093 1534 aa21.7■■□□□ 1.06
SNRPA1-207ENST00000559309 IFT172Q9UG01 1749 aa21.68■■□□□ 1.06
SNRPA1-207ENST00000559309 ZFYVE9O95405 1425 aa21.66■■□□□ 1.06
SNRPA1-207ENST00000559309 NEXMIFQ5QGS0 1516 aa21.65■■□□□ 1.06
SNRPA1-207ENST00000559309 SIN3AQ96ST3 1273 aa21.64■■□□□ 1.05
SNRPA1-207ENST00000559309 PPLO60437 1756 aa21.63■■□□□ 1.05
SNRPA1-207ENST00000559309 DMRT2Q9Y5R5 561 aa21.62■■□□□ 1.05
SNRPA1-207ENST00000559309 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
SNRPA1-207ENST00000559309 THEMISQ8N1K5 641 aaPredicted RBP21.6■■□□□ 1.05
SNRPA1-207ENST00000559309 CCER1Q8TC90 406 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms