RNA–Protein interactions for RNA: ENST00000559304.5

KNSTRN-206, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-206ENST00000559304 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
KNSTRN-206ENST00000559304 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
KNSTRN-206ENST00000559304 NUTM2DQ5VT03 806 aaPredicted RBP16.35■□□□□ 0.21
KNSTRN-206ENST00000559304 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
KNSTRN-206ENST00000559304 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
KNSTRN-206ENST00000559304 RGS12O14924 1447 aa16.34■□□□□ 0.21
KNSTRN-206ENST00000559304 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
KNSTRN-206ENST00000559304 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.21
KNSTRN-206ENST00000559304 PHLPP1O60346 1717 aa16.32■□□□□ 0.2
KNSTRN-206ENST00000559304 KIDINS220Q9ULH0 1771 aa16.32■□□□□ 0.2
KNSTRN-206ENST00000559304 LRP5O75197 1615 aa16.31■□□□□ 0.2
KNSTRN-206ENST00000559304 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
KNSTRN-206ENST00000559304 TNRQ92752 1358 aa16.28■□□□□ 0.2
KNSTRN-206ENST00000559304 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
KNSTRN-206ENST00000559304 YY1P25490 414 aa16.28■□□□□ 0.2
KNSTRN-206ENST00000559304 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
KNSTRN-206ENST00000559304 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.2
KNSTRN-206ENST00000559304 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
KNSTRN-206ENST00000559304 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
KNSTRN-206ENST00000559304 GGT6Q6P531 493 aa16.25■□□□□ 0.19
KNSTRN-206ENST00000559304 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
KNSTRN-206ENST00000559304 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
KNSTRN-206ENST00000559304 UGGT1Q9NYU2 1555 aa16.24■□□□□ 0.19
KNSTRN-206ENST00000559304 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
KNSTRN-206ENST00000559304 COL16A1Q07092 1604 aaPredicted RBP16.22■□□□□ 0.19
KNSTRN-206ENST00000559304 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.18
KNSTRN-206ENST00000559304 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
KNSTRN-206ENST00000559304 AFF2P51816 1311 aa16.19■□□□□ 0.18
KNSTRN-206ENST00000559304 KIF14Q15058 1648 aa16.19■□□□□ 0.18
KNSTRN-206ENST00000559304 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
KNSTRN-206ENST00000559304 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
KNSTRN-206ENST00000559304 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
KNSTRN-206ENST00000559304 TMEM94Q12767 1356 aa16.17■□□□□ 0.18
KNSTRN-206ENST00000559304 SENP3-EIF4A1A0A087X0R7 540 aa16.17■□□□□ 0.18
KNSTRN-206ENST00000559304 EP400Q96L91 3159 aa16.17■□□□□ 0.18
KNSTRN-206ENST00000559304 NLRP1Q9C000 1473 aa16.16■□□□□ 0.18
KNSTRN-206ENST00000559304 ATP7AQ04656 1500 aa16.16■□□□□ 0.18
KNSTRN-206ENST00000559304 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
KNSTRN-206ENST00000559304 QTRT2Q9H974 415 aaKnown RBP16.14■□□□□ 0.17
KNSTRN-206ENST00000559304 SHPRHQ149N8 1683 aa16.14■□□□□ 0.17
KNSTRN-206ENST00000559304 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
KNSTRN-206ENST00000559304 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
KNSTRN-206ENST00000559304 A2MP01023 1474 aa16.13■□□□□ 0.17
KNSTRN-206ENST00000559304 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
KNSTRN-206ENST00000559304 PZPP20742 1482 aa16.12■□□□□ 0.17
KNSTRN-206ENST00000559304 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
KNSTRN-206ENST00000559304 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
KNSTRN-206ENST00000559304 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
KNSTRN-206ENST00000559304 CCDC125Q86Z20 511 aa16.1■□□□□ 0.17
KNSTRN-206ENST00000559304 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
KNSTRN-206ENST00000559304 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
KNSTRN-206ENST00000559304 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
KNSTRN-206ENST00000559304 NGLY1Q96IV0 654 aa16.08■□□□□ 0.16
KNSTRN-206ENST00000559304 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
KNSTRN-206ENST00000559304 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
KNSTRN-206ENST00000559304 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
KNSTRN-206ENST00000559304 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
KNSTRN-206ENST00000559304 EEA1Q15075 1411 aa16.05■□□□□ 0.16
KNSTRN-206ENST00000559304 MSH6P52701 1360 aa16.05■□□□□ 0.16
KNSTRN-206ENST00000559304 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
KNSTRN-206ENST00000559304 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
KNSTRN-206ENST00000559304 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
KNSTRN-206ENST00000559304 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
KNSTRN-206ENST00000559304 TIAM1Q13009 1591 aa16.04■□□□□ 0.16
KNSTRN-206ENST00000559304 CLIP1P30622 1438 aa16.02■□□□□ 0.16
KNSTRN-206ENST00000559304 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.16
KNSTRN-206ENST00000559304 HRCP23327 699 aa16.01■□□□□ 0.15
KNSTRN-206ENST00000559304 INO80Q9ULG1 1556 aaPredicted RBP16■□□□□ 0.15
KNSTRN-206ENST00000559304 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
KNSTRN-206ENST00000559304 AHDC1Q5TGY3 1603 aaPredicted RBP16■□□□□ 0.15
KNSTRN-206ENST00000559304 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
KNSTRN-206ENST00000559304 PSDA5PKW4 1024 aaPredicted RBP15.99■□□□□ 0.15
KNSTRN-206ENST00000559304 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
KNSTRN-206ENST00000559304 LTKP29376 864 aa15.97■□□□□ 0.15
KNSTRN-206ENST00000559304 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
KNSTRN-206ENST00000559304 TXNDC2Q86VQ3 553 aa15.97■□□□□ 0.15
KNSTRN-206ENST00000559304 DIP2AQ14689 1571 aa15.96■□□□□ 0.15
KNSTRN-206ENST00000559304 KCNA6P17658 529 aa15.96■□□□□ 0.15
KNSTRN-206ENST00000559304 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
KNSTRN-206ENST00000559304 ABCC3O15438 1527 aa15.95■□□□□ 0.14
KNSTRN-206ENST00000559304 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
KNSTRN-206ENST00000559304 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
KNSTRN-206ENST00000559304 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
KNSTRN-206ENST00000559304 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
KNSTRN-206ENST00000559304 BCL9LQ86UU0 1499 aa15.93■□□□□ 0.14
KNSTRN-206ENST00000559304 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
KNSTRN-206ENST00000559304 KDM5AP29375 1690 aaKnown RBP15.92■□□□□ 0.14
KNSTRN-206ENST00000559304 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
KNSTRN-206ENST00000559304 NCOA2Q15596 1464 aa15.92■□□□□ 0.14
KNSTRN-206ENST00000559304 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
KNSTRN-206ENST00000559304 C1QTNF8P60827 252 aa15.91■□□□□ 0.14
KNSTRN-206ENST00000559304 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
KNSTRN-206ENST00000559304 SLIT1O75093 1534 aa15.9■□□□□ 0.14
KNSTRN-206ENST00000559304 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
KNSTRN-206ENST00000559304 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
KNSTRN-206ENST00000559304 TRPC5Q9UL62 973 aaPredicted RBP15.88■□□□□ 0.13
KNSTRN-206ENST00000559304 KIF3BO15066 747 aa15.87■□□□□ 0.13
KNSTRN-206ENST00000559304 SF3B2Q13435 895 aaKnown RBP15.87■□□□□ 0.13
KNSTRN-206ENST00000559304 ZNF784Q8NCA9 323 aaPredicted RBP15.87■□□□□ 0.13
KNSTRN-206ENST00000559304 USP21Q9UK80 565 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms