RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PHF8Q9UPP1 1060 aa4.48□□□□□ -1.69
GABPB1-209ENST00000559100 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
GABPB1-209ENST00000559100 ITGBL1O95965 494 aaPredicted RBP4.47□□□□□ -1.69
GABPB1-209ENST00000559100 THSD4Q6ZMP0 1018 aa4.47□□□□□ -1.69
GABPB1-209ENST00000559100 ZC3H15Q8WU90 426 aaKnown RBP4.47□□□□□ -1.69
GABPB1-209ENST00000559100 LARP6Q9BRS8 491 aaKnown RBP4.47□□□□□ -1.69
GABPB1-209ENST00000559100 FAM181BA6NEQ2 426 aa4.46□□□□□ -1.7
GABPB1-209ENST00000559100 BRPF1P55201 1214 aaPredicted RBP4.46□□□□□ -1.7
GABPB1-209ENST00000559100 FBXO22Q8NEZ5 403 aa4.46□□□□□ -1.7
GABPB1-209ENST00000559100 SLC24A3Q9HC58 644 aa4.46□□□□□ -1.7
GABPB1-209ENST00000559100 TESPA1A2RU30 521 aaPredicted RBP4.45□□□□□ -1.7
GABPB1-209ENST00000559100 PDE4AP27815 886 aa4.45□□□□□ -1.7
GABPB1-209ENST00000559100 DMRTA1Q5VZB9 504 aa4.45□□□□□ -1.7
GABPB1-209ENST00000559100 ILDR1Q86SU0 546 aaPredicted RBP4.45□□□□□ -1.7
GABPB1-209ENST00000559100 DDX27Q96GQ7 796 aaKnown RBP4.44□□□□□ -1.7
GABPB1-209ENST00000559100 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
GABPB1-209ENST00000559100 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
GABPB1-209ENST00000559100 BTBD11A6QL63 1104 aa4.43□□□□□ -1.7
GABPB1-209ENST00000559100 ARXQ96QS3 562 aa4.43□□□□□ -1.7
GABPB1-209ENST00000559100 NCKAP5LQ9HCH0 1330 aa4.43□□□□□ -1.7
GABPB1-209ENST00000559100 KRI1Q8N9T8 703 aaKnown RBP4.42□□□□□ -1.7
GABPB1-209ENST00000559100 LHX6Q9UPM6 363 aa4.42□□□□□ -1.7
GABPB1-209ENST00000559100 PDZRN3Q9UPQ7 1066 aa4.42□□□□□ -1.7
GABPB1-209ENST00000559100 TMEM92Q6UXU6 159 aa4.41□□□□□ -1.7
GABPB1-209ENST00000559100 PRKD2Q9BZL6 878 aa4.41□□□□□ -1.7
GABPB1-209ENST00000559100 GPIHBP1Q8IV16 184 aa4.4□□□□□ -1.71
GABPB1-209ENST00000559100 ZMYND10O75800 440 aa4.39□□□□□ -1.71
GABPB1-209ENST00000559100 NUDT7P0C024 238 aa4.39□□□□□ -1.71
GABPB1-209ENST00000559100 PSEN2P49810 448 aa4.39□□□□□ -1.71
GABPB1-209ENST00000559100 HOMEZQ8IX15 550 aa4.39□□□□□ -1.71
GABPB1-209ENST00000559100 KCTD17Q8N5Z5 321 aa4.39□□□□□ -1.71
GABPB1-209ENST00000559100 MS4A4AQ96JQ5 239 aa4.39□□□□□ -1.71
GABPB1-209ENST00000559100 NFX1Q12986 1120 aaKnown RBP4.38□□□□□ -1.71
GABPB1-209ENST00000559100 MFSD10Q14728 455 aa4.38□□□□□ -1.71
GABPB1-209ENST00000559100 RBM26Q5T8P6 1007 aaKnown RBP4.38□□□□□ -1.71
GABPB1-209ENST00000559100 CRISPLD2Q9H0B8 497 aa4.38□□□□□ -1.71
GABPB1-209ENST00000559100 SUPT5HO00267 1087 aaKnown RBP4.37□□□□□ -1.71
GABPB1-209ENST00000559100 PPP1R15BQ5SWA1 713 aa4.37□□□□□ -1.71
GABPB1-209ENST00000559100 AK7Q96M32 723 aa4.37□□□□□ -1.71
GABPB1-209ENST00000559100 DAXXQ9UER7 740 aaPredicted RBP4.37□□□□□ -1.71
GABPB1-209ENST00000559100 MLLT3P42568 568 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-209ENST00000559100 MYT1Q01538 1121 aa4.36□□□□□ -1.71
GABPB1-209ENST00000559100 BARGINQ6ZT62 677 aa4.36□□□□□ -1.71
GABPB1-209ENST00000559100 DPYSL4O14531 572 aa4.35□□□□□ -1.71
GABPB1-209ENST00000559100 CAMK2BQ13554 666 aa4.35□□□□□ -1.71
GABPB1-209ENST00000559100 IL27Q8NEV9 243 aa4.35□□□□□ -1.71
GABPB1-209ENST00000559100 TMC2Q8TDI7 906 aa4.35□□□□□ -1.71
GABPB1-209ENST00000559100 WNT2BQ93097 391 aa4.35□□□□□ -1.71
GABPB1-209ENST00000559100 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
GABPB1-209ENST00000559100 GPBP1L1Q9HC44 474 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-209ENST00000559100 ARIH1Q9Y4X5 557 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-209ENST00000559100 KCNC4Q03721 635 aa4.34□□□□□ -1.71
GABPB1-209ENST00000559100 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
GABPB1-209ENST00000559100 KDM4CQ9H3R0 1056 aa4.33□□□□□ -1.72
GABPB1-209ENST00000559100 GPHNQ9NQX3 736 aaPredicted RBP4.33□□□□□ -1.72
GABPB1-209ENST00000559100 NUTM2FA1L443 756 aa4.32□□□□□ -1.72
GABPB1-209ENST00000559100 GOLGA8CPA6NN73 597 aa4.32□□□□□ -1.72
GABPB1-209ENST00000559100 SPDYE16A6NNV3 312 aaPredicted RBP4.32□□□□□ -1.72
GABPB1-209ENST00000559100 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
GABPB1-209ENST00000559100 GRXCR2A6NFK2 248 aa4.31□□□□□ -1.72
GABPB1-209ENST00000559100 PDE4DQ08499 809 aa4.31□□□□□ -1.72
GABPB1-209ENST00000559100 DSG2Q14126 1118 aa4.31□□□□□ -1.72
GABPB1-209ENST00000559100 PKDCCQ504Y2 493 aa4.31□□□□□ -1.72
GABPB1-209ENST00000559100 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
GABPB1-209ENST00000559100 V9GY48 417 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-209ENST00000559100 TRIM66O15016 1216 aa4.3□□□□□ -1.72
GABPB1-209ENST00000559100 MAP3K9P80192 1104 aa4.3□□□□□ -1.72
GABPB1-209ENST00000559100 EMILIN3Q9NT22 766 aa4.3□□□□□ -1.72
GABPB1-209ENST00000559100 PDIA6Q15084 440 aa4.29□□□□□ -1.72
GABPB1-209ENST00000559100 MICALL2Q8IY33 904 aa4.29□□□□□ -1.72
GABPB1-209ENST00000559100 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
GABPB1-209ENST00000559100 PLPP6Q8IY26 295 aa4.28□□□□□ -1.72
GABPB1-209ENST00000559100 UPF1Q92900 1129 aaKnown RBP eCLIP4.28□□□□□ -1.72
GABPB1-209ENST00000559100 VPS9D1Q9Y2B5 631 aa4.28□□□□□ -1.72
GABPB1-209ENST00000559100 FOXK1P85037 733 aa4.27□□□□□ -1.73
GABPB1-209ENST00000559100 TTLL12Q14166 644 aaPredicted RBP4.27□□□□□ -1.73
GABPB1-209ENST00000559100 MINK1Q8N4C8 1332 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-209ENST00000559100 PSDA5PKW4 1024 aaPredicted RBP4.26□□□□□ -1.73
GABPB1-209ENST00000559100 C2orf72A6NCS6 295 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 ZSCAN1Q8NBB4 408 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 CCDC102AQ96A19 550 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 ARID3AQ99856 593 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 FAM117AQ9C073 453 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 ZMYND15Q9H091 742 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 RSPH6AQ9H0K4 717 aa4.26□□□□□ -1.73
GABPB1-209ENST00000559100 DGAT1O75907 488 aa4.25□□□□□ -1.73
GABPB1-209ENST00000559100 FCHSD2O94868 740 aa4.25□□□□□ -1.73
GABPB1-209ENST00000559100 MAP2K5Q13163 448 aa4.25□□□□□ -1.73
GABPB1-209ENST00000559100 DDX12PQ92771 950 aa4.25□□□□□ -1.73
GABPB1-209ENST00000559100 DDRGK1Q96HY6 314 aa4.25□□□□□ -1.73
GABPB1-209ENST00000559100 ATP1B4Q9UN42 357 aaPredicted RBP4.25□□□□□ -1.73
GABPB1-209ENST00000559100 IRF6O14896 467 aa4.24□□□□□ -1.73
GABPB1-209ENST00000559100 GNPATO15228 680 aa4.24□□□□□ -1.73
GABPB1-209ENST00000559100 TBC1D12O60347 775 aa4.23□□□□□ -1.73
GABPB1-209ENST00000559100 HIC1Q14526 733 aa4.23□□□□□ -1.73
GABPB1-209ENST00000559100 GPR37O15354 613 aa4.22□□□□□ -1.73
GABPB1-209ENST00000559100 ST8SIA5O15466 376 aa4.22□□□□□ -1.73
GABPB1-209ENST00000559100 OSBPP22059 807 aa4.22□□□□□ -1.73
GABPB1-209ENST00000559100 PARP9Q8IXQ6 854 aa4.22□□□□□ -1.73
GABPB1-209ENST00000559100 MRPL50Q8N5N7 158 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms