RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
HMG20A-208ENST00000559099 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.28
HMG20A-208ENST00000559099 GGT6Q6P531 493 aa13.33□□□□□ -0.28
HMG20A-208ENST00000559099 ATP7AQ04656 1500 aa13.33□□□□□ -0.28
HMG20A-208ENST00000559099 CDK12Q9NYV4 1490 aaPredicted RBP13.32□□□□□ -0.28
HMG20A-208ENST00000559099 FAM135AQ9P2D6 1515 aa13.31□□□□□ -0.28
HMG20A-208ENST00000559099 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
HMG20A-208ENST00000559099 PZPP20742 1482 aa13.3□□□□□ -0.28
HMG20A-208ENST00000559099 SYCP2Q9BX26 1530 aa13.3□□□□□ -0.28
HMG20A-208ENST00000559099 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
HMG20A-208ENST00000559099 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
HMG20A-208ENST00000559099 CDC42BPAQ5VT25 1732 aa13.29□□□□□ -0.28
HMG20A-208ENST00000559099 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
HMG20A-208ENST00000559099 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
HMG20A-208ENST00000559099 JCADQ9P266 1359 aa13.29□□□□□ -0.28
HMG20A-208ENST00000559099 CLIP1P30622 1438 aa13.29□□□□□ -0.28
HMG20A-208ENST00000559099 ZNF772Q68DY9 489 aaPredicted RBP13.28□□□□□ -0.28
HMG20A-208ENST00000559099 KDM5DQ9BY66 1539 aa13.28□□□□□ -0.28
HMG20A-208ENST00000559099 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
HMG20A-208ENST00000559099 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
HMG20A-208ENST00000559099 RXRBP28702 533 aa13.26□□□□□ -0.29
HMG20A-208ENST00000559099 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
HMG20A-208ENST00000559099 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
HMG20A-208ENST00000559099 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
HMG20A-208ENST00000559099 EP400Q96L91 3159 aa13.26□□□□□ -0.29
HMG20A-208ENST00000559099 RGS12O14924 1447 aa13.24□□□□□ -0.29
HMG20A-208ENST00000559099 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
HMG20A-208ENST00000559099 TMEM94Q12767 1356 aa13.22□□□□□ -0.29
HMG20A-208ENST00000559099 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
HMG20A-208ENST00000559099 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
HMG20A-208ENST00000559099 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
HMG20A-208ENST00000559099 HNRNPMP52272 730 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMG20A-208ENST00000559099 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
HMG20A-208ENST00000559099 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
HMG20A-208ENST00000559099 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
HMG20A-208ENST00000559099 FMN1Q68DA7 1419 aa13.19□□□□□ -0.3
HMG20A-208ENST00000559099 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
HMG20A-208ENST00000559099 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
HMG20A-208ENST00000559099 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
HMG20A-208ENST00000559099 TIAM1Q13009 1591 aa13.16□□□□□ -0.3
HMG20A-208ENST00000559099 KIAA1107Q9UPP5 1409 aa13.16□□□□□ -0.3
HMG20A-208ENST00000559099 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
HMG20A-208ENST00000559099 ARHGAP23Q9P227 1491 aa13.16□□□□□ -0.3
HMG20A-208ENST00000559099 LRP5O75197 1615 aa13.15□□□□□ -0.3
HMG20A-208ENST00000559099 LTKP29376 864 aa13.15□□□□□ -0.3
HMG20A-208ENST00000559099 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
HMG20A-208ENST00000559099 NCOA2Q15596 1464 aa13.15□□□□□ -0.3
HMG20A-208ENST00000559099 SLIT1O75093 1534 aa13.14□□□□□ -0.31
HMG20A-208ENST00000559099 GPATCH8Q9UKJ3 1502 aaKnown RBP13.13□□□□□ -0.31
HMG20A-208ENST00000559099 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-208ENST00000559099 DHX29Q7Z478 1369 aaKnown RBP13.12□□□□□ -0.31
HMG20A-208ENST00000559099 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
HMG20A-208ENST00000559099 AFF2P51816 1311 aa13.12□□□□□ -0.31
HMG20A-208ENST00000559099 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
HMG20A-208ENST00000559099 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-208ENST00000559099 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-208ENST00000559099 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-208ENST00000559099 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-208ENST00000559099 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
HMG20A-208ENST00000559099 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
HMG20A-208ENST00000559099 WASHC2CQ9Y4E1 1318 aa13.11□□□□□ -0.31
HMG20A-208ENST00000559099 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
HMG20A-208ENST00000559099 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
HMG20A-208ENST00000559099 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
HMG20A-208ENST00000559099 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
HMG20A-208ENST00000559099 KIF3BO15066 747 aa13.09□□□□□ -0.31
HMG20A-208ENST00000559099 FOXD1Q16676 465 aa13.09□□□□□ -0.31
HMG20A-208ENST00000559099 RBM6P78332 1123 aaKnown RBP13.08□□□□□ -0.32
HMG20A-208ENST00000559099 TXNDC2Q86VQ3 553 aa13.08□□□□□ -0.32
HMG20A-208ENST00000559099 NKTRP30414 1462 aaKnown RBP13.08□□□□□ -0.32
HMG20A-208ENST00000559099 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.32
HMG20A-208ENST00000559099 MSH6P52701 1360 aa13.07□□□□□ -0.32
HMG20A-208ENST00000559099 KCNA6P17658 529 aa13.07□□□□□ -0.32
HMG20A-208ENST00000559099 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
HMG20A-208ENST00000559099 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
HMG20A-208ENST00000559099 ABCC3O15438 1527 aa13.07□□□□□ -0.32
HMG20A-208ENST00000559099 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
HMG20A-208ENST00000559099 MBD5Q9P267 1494 aa13.05□□□□□ -0.32
HMG20A-208ENST00000559099 TET3O43151 1660 aa13.05□□□□□ -0.32
HMG20A-208ENST00000559099 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
HMG20A-208ENST00000559099 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
HMG20A-208ENST00000559099 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
HMG20A-208ENST00000559099 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.33
HMG20A-208ENST00000559099 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
HMG20A-208ENST00000559099 NHSL1Q5SYE7 1610 aa13.01□□□□□ -0.33
HMG20A-208ENST00000559099 TMEM2Q9UHN6 1383 aa13□□□□□ -0.33
HMG20A-208ENST00000559099 ZNF644Q9H582 1327 aaPredicted RBP13□□□□□ -0.33
HMG20A-208ENST00000559099 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
HMG20A-208ENST00000559099 SLC26A8Q96RN1 970 aa12.99□□□□□ -0.33
HMG20A-208ENST00000559099 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
HMG20A-208ENST00000559099 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
HMG20A-208ENST00000559099 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
HMG20A-208ENST00000559099 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
HMG20A-208ENST00000559099 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
HMG20A-208ENST00000559099 CCDC125Q86Z20 511 aa12.97□□□□□ -0.33
HMG20A-208ENST00000559099 MROH1Q8NDA8 1641 aa12.97□□□□□ -0.33
HMG20A-208ENST00000559099 NGLY1Q96IV0 654 aa12.96□□□□□ -0.33
HMG20A-208ENST00000559099 CEP152O94986 1710 aa12.96□□□□□ -0.34
HMG20A-208ENST00000559099 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
HMG20A-208ENST00000559099 EEA1Q15075 1411 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms