RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
AP3S2-208ENST00000558999 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
AP3S2-208ENST00000558999 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
AP3S2-208ENST00000558999 THEMISQ8N1K5 641 aaPredicted RBP12.83□□□□□ -0.36
AP3S2-208ENST00000558999 CFDP1Q9UEE9 299 aaPredicted RBP12.83□□□□□ -0.36
AP3S2-208ENST00000558999 DEPDC5O75140 1603 aa12.83□□□□□ -0.36
AP3S2-208ENST00000558999 MED14O60244 1454 aa12.83□□□□□ -0.36
AP3S2-208ENST00000558999 TNRQ92752 1358 aa12.82□□□□□ -0.36
AP3S2-208ENST00000558999 FAM135AQ9P2D6 1515 aa12.82□□□□□ -0.36
AP3S2-208ENST00000558999 FYCO1Q9BQS8 1478 aa12.81□□□□□ -0.36
AP3S2-208ENST00000558999 FOXD1Q16676 465 aa12.81□□□□□ -0.36
AP3S2-208ENST00000558999 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
AP3S2-208ENST00000558999 PZPP20742 1482 aa12.8□□□□□ -0.36
AP3S2-208ENST00000558999 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
AP3S2-208ENST00000558999 DHX29Q7Z478 1369 aaKnown RBP12.8□□□□□ -0.36
AP3S2-208ENST00000558999 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
AP3S2-208ENST00000558999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
AP3S2-208ENST00000558999 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
AP3S2-208ENST00000558999 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
AP3S2-208ENST00000558999 IQGAP1P46940 1657 aa12.78□□□□□ -0.36
AP3S2-208ENST00000558999 STRCP1A6NGW2 1772 aa12.78□□□□□ -0.36
AP3S2-208ENST00000558999 MIA2Q96PC5 1412 aa12.78□□□□□ -0.36
AP3S2-208ENST00000558999 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.36
AP3S2-208ENST00000558999 RNF17Q9BXT8 1623 aaKnown RBP12.77□□□□□ -0.36
AP3S2-208ENST00000558999 RGS17Q9UGC6 210 aaPredicted RBP12.77□□□□□ -0.37
AP3S2-208ENST00000558999 LRRC7Q96NW7 1537 aa12.77□□□□□ -0.37
AP3S2-208ENST00000558999 KDM5DQ9BY66 1539 aa12.77□□□□□ -0.37
AP3S2-208ENST00000558999 SYNMO15061 1565 aa12.77□□□□□ -0.37
AP3S2-208ENST00000558999 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
AP3S2-208ENST00000558999 KIF3BO15066 747 aa12.75□□□□□ -0.37
AP3S2-208ENST00000558999 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
AP3S2-208ENST00000558999 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
AP3S2-208ENST00000558999 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.37
AP3S2-208ENST00000558999 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
AP3S2-208ENST00000558999 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
AP3S2-208ENST00000558999 TIAM1Q13009 1591 aa12.7□□□□□ -0.38
AP3S2-208ENST00000558999 XIRP1Q702N8 1843 aaKnown RBP12.69□□□□□ -0.38
AP3S2-208ENST00000558999 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
AP3S2-208ENST00000558999 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
AP3S2-208ENST00000558999 POTEAQ6S8J7 498 aa12.67□□□□□ -0.38
AP3S2-208ENST00000558999 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
AP3S2-208ENST00000558999 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
AP3S2-208ENST00000558999 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
AP3S2-208ENST00000558999 CEP162Q5TB80 1403 aa12.64□□□□□ -0.39
AP3S2-208ENST00000558999 SCAF11Q99590 1463 aaKnown RBP12.64□□□□□ -0.39
AP3S2-208ENST00000558999 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
AP3S2-208ENST00000558999 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
AP3S2-208ENST00000558999 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
AP3S2-208ENST00000558999 ABCC3O15438 1527 aa12.62□□□□□ -0.39
AP3S2-208ENST00000558999 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
AP3S2-208ENST00000558999 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
AP3S2-208ENST00000558999 SLIT1O75093 1534 aa12.62□□□□□ -0.39
AP3S2-208ENST00000558999 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
AP3S2-208ENST00000558999 TXNDC2Q86VQ3 553 aa12.61□□□□□ -0.39
AP3S2-208ENST00000558999 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
AP3S2-208ENST00000558999 EIF2AK4Q9P2K8 1649 aaKnown RBP12.6□□□□□ -0.39
AP3S2-208ENST00000558999 LTKP29376 864 aa12.6□□□□□ -0.39
AP3S2-208ENST00000558999 ROBO1Q9Y6N7 1651 aa12.6□□□□□ -0.39
AP3S2-208ENST00000558999 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
AP3S2-208ENST00000558999 SETD1AO15047 1707 aaKnown RBP12.58□□□□□ -0.4
AP3S2-208ENST00000558999 CEP152O94986 1710 aa12.58□□□□□ -0.4
AP3S2-208ENST00000558999 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
AP3S2-208ENST00000558999 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
AP3S2-208ENST00000558999 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
AP3S2-208ENST00000558999 MROH1Q8NDA8 1641 aa12.56□□□□□ -0.4
AP3S2-208ENST00000558999 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
AP3S2-208ENST00000558999 KCNA6P17658 529 aa12.55□□□□□ -0.4
AP3S2-208ENST00000558999 KDM5AP29375 1690 aaKnown RBP12.54□□□□□ -0.4
AP3S2-208ENST00000558999 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
AP3S2-208ENST00000558999 JCADQ9P266 1359 aa12.54□□□□□ -0.4
AP3S2-208ENST00000558999 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
AP3S2-208ENST00000558999 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
AP3S2-208ENST00000558999 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
AP3S2-208ENST00000558999 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.45e-8■■■■□ 22.6
AP3S2-208ENST00000558999 PIK3C2BO00750 1634 aa12.52□□□□□ -0.4
AP3S2-208ENST00000558999 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
AP3S2-208ENST00000558999 TET3O43151 1660 aa12.51□□□□□ -0.41
AP3S2-208ENST00000558999 ZNF772Q68DY9 489 aaPredicted RBP12.5□□□□□ -0.41
AP3S2-208ENST00000558999 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
AP3S2-208ENST00000558999 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
AP3S2-208ENST00000558999 MSH6P52701 1360 aa12.5□□□□□ -0.41
AP3S2-208ENST00000558999 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
AP3S2-208ENST00000558999 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
AP3S2-208ENST00000558999 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
AP3S2-208ENST00000558999 EFCAB6Q5THR3 1501 aa12.49□□□□□ -0.41
AP3S2-208ENST00000558999 SPATA31A6Q5VVP1 1343 aa12.48□□□□□ -0.41
AP3S2-208ENST00000558999 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
AP3S2-208ENST00000558999 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
AP3S2-208ENST00000558999 SLC26A8Q96RN1 970 aa12.47□□□□□ -0.41
AP3S2-208ENST00000558999 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.41
AP3S2-208ENST00000558999 IDI1Q13907 227 aa12.46□□□□□ -0.41
AP3S2-208ENST00000558999 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.41
AP3S2-208ENST00000558999 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
AP3S2-208ENST00000558999 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
AP3S2-208ENST00000558999 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
AP3S2-208ENST00000558999 SHPRHQ149N8 1683 aa12.44□□□□□ -0.42
AP3S2-208ENST00000558999 MYOM3Q5VTT5 1437 aa12.44□□□□□ -0.42
AP3S2-208ENST00000558999 ERBINQ96RT1 1412 aa12.44□□□□□ -0.42
AP3S2-208ENST00000558999 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
AP3S2-208ENST00000558999 LRP6O75581 1613 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms