RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 RGL2O15211 777 aa9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 MADDQ8WXG6 1647 aa9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 ZNF777Q9ULD5 760 aaPredicted RBP9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 KIDINS220Q9ULH0 1771 aa9.52□□□□□ -0.88
CTDSPL2-204ENST00000558966 ATP10AO60312 1499 aa9.52□□□□□ -0.89
CTDSPL2-204ENST00000558966 C9orf84Q5VXU9 1444 aa9.52□□□□□ -0.89
CTDSPL2-204ENST00000558966 KIAA1107Q9UPP5 1409 aa9.52□□□□□ -0.89
CTDSPL2-204ENST00000558966 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
CTDSPL2-204ENST00000558966 ARID4BQ4LE39 1312 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-204ENST00000558966 KANK4Q5T7N3 995 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-204ENST00000558966 ZNF644Q9H582 1327 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-204ENST00000558966 REREQ9P2R6 1566 aa9.51□□□□□ -0.89
CTDSPL2-204ENST00000558966 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-204ENST00000558966 HNRNPMP52272 730 aaKnown RBP eCLIP9.5□□□□□ -0.897e-8■■■■■ 82.1
CTDSPL2-204ENST00000558966 PTPRMP28827 1452 aa9.5□□□□□ -0.89
CTDSPL2-204ENST00000558966 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL2-204ENST00000558966 RIMS1Q86UR5 1692 aaKnown RBP9.49□□□□□ -0.89
CTDSPL2-204ENST00000558966 MBD5Q9P267 1494 aa9.49□□□□□ -0.89
CTDSPL2-204ENST00000558966 CAMSAP2Q08AD1 1489 aa9.49□□□□□ -0.89
CTDSPL2-204ENST00000558966 ATP7AQ04656 1500 aa9.48□□□□□ -0.89
CTDSPL2-204ENST00000558966 MYT1LQ9UL68 1186 aa9.48□□□□□ -0.89
CTDSPL2-204ENST00000558966 FER1L4A9Z1Z3 1794 aa9.48□□□□□ -0.89
CTDSPL2-204ENST00000558966 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-204ENST00000558966 SPAG9O60271 1321 aaKnown RBP9.47□□□□□ -0.89
CTDSPL2-204ENST00000558966 AGLP35573 1532 aa9.47□□□□□ -0.89
CTDSPL2-204ENST00000558966 AKT1S1Q96B36 256 aa9.47□□□□□ -0.89
CTDSPL2-204ENST00000558966 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
CTDSPL2-204ENST00000558966 MLECQ14165 292 aa9.46□□□□□ -0.9
CTDSPL2-204ENST00000558966 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
CTDSPL2-204ENST00000558966 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
CTDSPL2-204ENST00000558966 CCDC141Q6ZP82 1450 aa9.45□□□□□ -0.9
CTDSPL2-204ENST00000558966 PLXNC1O60486 1568 aa9.45□□□□□ -0.9
CTDSPL2-204ENST00000558966 ARHGEF5Q12774 1597 aa9.45□□□□□ -0.9
CTDSPL2-204ENST00000558966 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL2-204ENST00000558966 MIA2Q96PC5 1412 aa9.44□□□□□ -0.9
CTDSPL2-204ENST00000558966 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.43□□□□□ -0.9
CTDSPL2-204ENST00000558966 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
CTDSPL2-204ENST00000558966 RTEL1-TNFRSF6BF6WH68 1400 aa9.43□□□□□ -0.9
CTDSPL2-204ENST00000558966 A2MP01023 1474 aa9.43□□□□□ -0.9
CTDSPL2-204ENST00000558966 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-204ENST00000558966 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-204ENST00000558966 PTPN23Q9H3S7 1636 aa9.41□□□□□ -0.9
CTDSPL2-204ENST00000558966 CFAP44Q96MT7 982 aa9.4□□□□□ -0.9
CTDSPL2-204ENST00000558966 MAST1Q9Y2H9 1570 aa9.4□□□□□ -0.9
CTDSPL2-204ENST00000558966 PRR29P0C7W0 189 aa9.4□□□□□ -0.91
CTDSPL2-204ENST00000558966 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.91
CTDSPL2-204ENST00000558966 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
CTDSPL2-204ENST00000558966 LMTK3Q96Q04 1460 aa9.39□□□□□ -0.91
CTDSPL2-204ENST00000558966 NUBP1P53384 320 aa9.39□□□□□ -0.91
CTDSPL2-204ENST00000558966 TCOF1Q13428 1488 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-204ENST00000558966 CROCC2H7BZ55 1655 aa9.38□□□□□ -0.91
CTDSPL2-204ENST00000558966 C3P01024 1663 aa9.38□□□□□ -0.91
CTDSPL2-204ENST00000558966 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-204ENST00000558966 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
CTDSPL2-204ENST00000558966 DHX29Q7Z478 1369 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-204ENST00000558966 CEBPAP49715 358 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-204ENST00000558966 MROH2AA6NES4 1674 aa9.37□□□□□ -0.91
CTDSPL2-204ENST00000558966 TSPY4P0CV99 314 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 TSPY10P0CW01 314 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 DNMT1P26358 1616 aaKnown RBP9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 CLTCQ00610 1675 aaKnown RBP9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 CNTLNQ9NXG0 1405 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 SHANK2Q9UPX8 1470 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 ABCC5O15440 1437 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 GSE1Q14687 1217 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 DCAF8Q5TAQ9 597 aa9.36□□□□□ -0.91
CTDSPL2-204ENST00000558966 PREX1Q8TCU6 1659 aa9.35□□□□□ -0.91
CTDSPL2-204ENST00000558966 DAPK1P53355 1430 aa9.35□□□□□ -0.91
CTDSPL2-204ENST00000558966 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
CTDSPL2-204ENST00000558966 GGT6Q6P531 493 aa9.34□□□□□ -0.91
CTDSPL2-204ENST00000558966 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
CTDSPL2-204ENST00000558966 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
CTDSPL2-204ENST00000558966 RNF17Q9BXT8 1623 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-204ENST00000558966 EIF2AK4Q9P2K8 1649 aaKnown RBP9.33□□□□□ -0.92
CTDSPL2-204ENST00000558966 KIF3BO15066 747 aa9.33□□□□□ -0.92
CTDSPL2-204ENST00000558966 MNX1P50219 401 aaPredicted RBP9.33□□□□□ -0.92
CTDSPL2-204ENST00000558966 VSIG10Q8N0Z9 540 aa9.33□□□□□ -0.92
CTDSPL2-204ENST00000558966 ZMYM3Q14202 1370 aa9.33□□□□□ -0.92
CTDSPL2-204ENST00000558966 HSPA2P54652 639 aa9.32□□□□□ -0.92
CTDSPL2-204ENST00000558966 KDM5DQ9BY66 1539 aa9.32□□□□□ -0.92
CTDSPL2-204ENST00000558966 DUOX2Q9NRD8 1548 aa9.32□□□□□ -0.92
CTDSPL2-204ENST00000558966 FAM135AQ9P2D6 1515 aa9.32□□□□□ -0.92
CTDSPL2-204ENST00000558966 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
CTDSPL2-204ENST00000558966 MROH1Q8NDA8 1641 aa9.32□□□□□ -0.92
CTDSPL2-204ENST00000558966 KIF15Q9NS87 1388 aa9.31□□□□□ -0.92
CTDSPL2-204ENST00000558966 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
CTDSPL2-204ENST00000558966 NPATQ14207 1427 aa9.31□□□□□ -0.92
CTDSPL2-204ENST00000558966 UHRF1BP1Q6BDS2 1440 aa9.31□□□□□ -0.92
CTDSPL2-204ENST00000558966 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
CTDSPL2-204ENST00000558966 PPARGC1BQ86YN6 1023 aaKnown RBP9.3□□□□□ -0.92
CTDSPL2-204ENST00000558966 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
CTDSPL2-204ENST00000558966 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
CTDSPL2-204ENST00000558966 ADGRL2O95490 1459 aa9.29□□□□□ -0.92
CTDSPL2-204ENST00000558966 ERBINQ96RT1 1412 aa9.29□□□□□ -0.92
CTDSPL2-204ENST00000558966 RRP7BPQ9NSQ0 103 aa9.29□□□□□ -0.92
CTDSPL2-204ENST00000558966 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
CTDSPL2-204ENST00000558966 ZC3H13Q5T200 1668 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms