RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 DNMT1P26358 1616 aaKnown RBP14.38□□□□□ -0.11
RORA-208ENST00000558904 PLXNC1O60486 1568 aa14.38□□□□□ -0.11
RORA-208ENST00000558904 LRRIQ1Q96JM4 1722 aa14.38□□□□□ -0.11
RORA-208ENST00000558904 SYCP2Q9BX26 1530 aa14.37□□□□□ -0.11
RORA-208ENST00000558904 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
RORA-208ENST00000558904 TNRQ92752 1358 aa14.35□□□□□ -0.11
RORA-208ENST00000558904 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
RORA-208ENST00000558904 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
RORA-208ENST00000558904 INO80Q9ULG1 1556 aaPredicted RBP14.33□□□□□ -0.12
RORA-208ENST00000558904 DHX29Q7Z478 1369 aaKnown RBP14.33□□□□□ -0.12
RORA-208ENST00000558904 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.12
RORA-208ENST00000558904 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
RORA-208ENST00000558904 WASHC2CQ9Y4E1 1318 aa14.32□□□□□ -0.12
RORA-208ENST00000558904 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
RORA-208ENST00000558904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.31□□□□□ -0.12
RORA-208ENST00000558904 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
RORA-208ENST00000558904 MED14O60244 1454 aa14.31□□□□□ -0.12
RORA-208ENST00000558904 KIF3BO15066 747 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 RSPH4AQ5TD94 716 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 MIA2Q96PC5 1412 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 FYCO1Q9BQS8 1478 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 FAM135AQ9P2D6 1515 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
RORA-208ENST00000558904 PZPP20742 1482 aa14.29□□□□□ -0.12
RORA-208ENST00000558904 VWDEQ8N2E2 1590 aa14.28□□□□□ -0.12
RORA-208ENST00000558904 DEPDC5O75140 1603 aa14.27□□□□□ -0.12
RORA-208ENST00000558904 UGGT1Q9NYU2 1555 aa14.26□□□□□ -0.13
RORA-208ENST00000558904 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
RORA-208ENST00000558904 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
RORA-208ENST00000558904 KDM5DQ9BY66 1539 aa14.25□□□□□ -0.13
RORA-208ENST00000558904 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
RORA-208ENST00000558904 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
RORA-208ENST00000558904 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
RORA-208ENST00000558904 MBD5Q9P267 1494 aa14.23□□□□□ -0.13
RORA-208ENST00000558904 ZNF644Q9H582 1327 aaPredicted RBP14.22□□□□□ -0.13
RORA-208ENST00000558904 RNF17Q9BXT8 1623 aaKnown RBP14.22□□□□□ -0.13
RORA-208ENST00000558904 IQGAP1P46940 1657 aa14.21□□□□□ -0.13
RORA-208ENST00000558904 TSPY4P0CV99 314 aa14.21□□□□□ -0.13
RORA-208ENST00000558904 TSPY10P0CW01 314 aa14.21□□□□□ -0.13
RORA-208ENST00000558904 SYNMO15061 1565 aa14.21□□□□□ -0.14
RORA-208ENST00000558904 FAM135BQ49AJ0 1406 aa14.18□□□□□ -0.14
RORA-208ENST00000558904 CCDC141Q6ZP82 1450 aa14.17□□□□□ -0.14
RORA-208ENST00000558904 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
RORA-208ENST00000558904 POTEAQ6S8J7 498 aa14.16□□□□□ -0.14
RORA-208ENST00000558904 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
RORA-208ENST00000558904 TXNDC2Q86VQ3 553 aa14.15□□□□□ -0.14
RORA-208ENST00000558904 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
RORA-208ENST00000558904 STRCP1A6NGW2 1772 aa14.14□□□□□ -0.15
RORA-208ENST00000558904 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
RORA-208ENST00000558904 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
RORA-208ENST00000558904 SCAF11Q99590 1463 aaKnown RBP14.12□□□□□ -0.15
RORA-208ENST00000558904 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
RORA-208ENST00000558904 LTKP29376 864 aa14.1□□□□□ -0.15
RORA-208ENST00000558904 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
RORA-208ENST00000558904 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
RORA-208ENST00000558904 KCNA6P17658 529 aa14.08□□□□□ -0.16
RORA-208ENST00000558904 CAMSAP2Q08AD1 1489 aa14.07□□□□□ -0.16
RORA-208ENST00000558904 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
RORA-208ENST00000558904 ABCC3O15438 1527 aa14.07□□□□□ -0.16
RORA-208ENST00000558904 SLIT1O75093 1534 aa14.07□□□□□ -0.16
RORA-208ENST00000558904 PROSER2Q86WR7 435 aaPredicted RBP14.07□□□□□ -0.16
RORA-208ENST00000558904 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
RORA-208ENST00000558904 UBR1Q8IWV7 1749 aa14.06□□□□□ -0.16
RORA-208ENST00000558904 TMEM94Q12767 1356 aa14.06□□□□□ -0.16
RORA-208ENST00000558904 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
RORA-208ENST00000558904 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
RORA-208ENST00000558904 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
RORA-208ENST00000558904 JCADQ9P266 1359 aa14.04□□□□□ -0.16
RORA-208ENST00000558904 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
RORA-208ENST00000558904 ARHGAP31Q2M1Z3 1444 aa14.03□□□□□ -0.16
RORA-208ENST00000558904 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
RORA-208ENST00000558904 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.16
RORA-208ENST00000558904 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.16
RORA-208ENST00000558904 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
RORA-208ENST00000558904 UPF1Q92900 1129 aaKnown RBP eCLIP14.02□□□□□ -0.17
RORA-208ENST00000558904 SLAIN2Q9P270 581 aa14.02□□□□□ -0.17
RORA-208ENST00000558904 MSH6P52701 1360 aa14.01□□□□□ -0.17
RORA-208ENST00000558904 ROBO1Q9Y6N7 1651 aa14.01□□□□□ -0.17
RORA-208ENST00000558904 SPATA31A6Q5VVP1 1343 aa13.99□□□□□ -0.17
RORA-208ENST00000558904 MAST1Q9Y2H9 1570 aa13.99□□□□□ -0.17
RORA-208ENST00000558904 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
RORA-208ENST00000558904 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
RORA-208ENST00000558904 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
RORA-208ENST00000558904 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
RORA-208ENST00000558904 HDGFP51858 240 aaKnown RBP13.97□□□□□ -0.17
RORA-208ENST00000558904 BCANQ96GW7 911 aa13.97□□□□□ -0.17
RORA-208ENST00000558904 KANK1Q14678 1352 aa13.96□□□□□ -0.17
RORA-208ENST00000558904 DUOX2Q9NRD8 1548 aa13.96□□□□□ -0.17
RORA-208ENST00000558904 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.17
RORA-208ENST00000558904 RXRBP28702 533 aa13.96□□□□□ -0.17
RORA-208ENST00000558904 IDI1Q13907 227 aa13.95□□□□□ -0.18
RORA-208ENST00000558904 FGD6Q6ZV73 1430 aa13.95□□□□□ -0.18
RORA-208ENST00000558904 CEP152O94986 1710 aa13.95□□□□□ -0.18
RORA-208ENST00000558904 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
RORA-208ENST00000558904 PHLPP1O60346 1717 aa13.94□□□□□ -0.18
RORA-208ENST00000558904 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
RORA-208ENST00000558904 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
RORA-208ENST00000558904 SLC52A1Q9NWF4 448 aa13.94□□□□□ -0.18
RORA-208ENST00000558904 MAP3K1Q13233 1512 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms