RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 A2ML1A8K2U0 1454 aa24.17■■□□□ 1.46
RPL28-206ENST00000558752 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
RPL28-206ENST00000558752 FAM135AQ9P2D6 1515 aa24.16■■□□□ 1.46
RPL28-206ENST00000558752 TSPY4P0CV99 314 aa24.16■■□□□ 1.46
RPL28-206ENST00000558752 TSPY10P0CW01 314 aa24.16■■□□□ 1.46
RPL28-206ENST00000558752 NCOA2Q15596 1464 aa24.14■■□□□ 1.46
RPL28-206ENST00000558752 WASHC2CQ9Y4E1 1318 aa24.13■■□□□ 1.45
RPL28-206ENST00000558752 TNRQ92752 1358 aa24.12■■□□□ 1.45
RPL28-206ENST00000558752 CAMSAP2Q08AD1 1489 aa24.12■■□□□ 1.45
RPL28-206ENST00000558752 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
RPL28-206ENST00000558752 HSPA1LP34931 641 aa24.09■■□□□ 1.45
RPL28-206ENST00000558752 DNMT1P26358 1616 aaKnown RBP24.09■■□□□ 1.45
RPL28-206ENST00000558752 PZPP20742 1482 aa24.08■■□□□ 1.45
RPL28-206ENST00000558752 THEMISQ8N1K5 641 aaPredicted RBP24.07■■□□□ 1.44
RPL28-206ENST00000558752 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
RPL28-206ENST00000558752 ARHGEF5Q12774 1597 aa24.06■■□□□ 1.44
RPL28-206ENST00000558752 PIP4K2BP78356 416 aa24.05■■□□□ 1.44
RPL28-206ENST00000558752 FBXO31Q5XUX0 539 aaPredicted RBP24.05■■□□□ 1.44
RPL28-206ENST00000558752 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
RPL28-206ENST00000558752 NLRP1Q9C000 1473 aa24.02■■□□□ 1.44
RPL28-206ENST00000558752 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
RPL28-206ENST00000558752 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
RPL28-206ENST00000558752 CPS1P31327 1500 aa24■■□□□ 1.43
RPL28-206ENST00000558752 TOM1O60784 492 aa24■■□□□ 1.43
RPL28-206ENST00000558752 POLR1AO95602 1720 aaPredicted RBP24■■□□□ 1.43
RPL28-206ENST00000558752 LRRC9Q6ZRR7 1453 aa23.98■■□□□ 1.43
RPL28-206ENST00000558752 UGGT1Q9NYU2 1555 aa23.96■■□□□ 1.43
RPL28-206ENST00000558752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
RPL28-206ENST00000558752 SHANK2Q9UPX8 1470 aa23.95■■□□□ 1.42
RPL28-206ENST00000558752 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.42
RPL28-206ENST00000558752 MAST1Q9Y2H9 1570 aa23.94■■□□□ 1.42
RPL28-206ENST00000558752 NEURL4Q96JN8 1562 aa23.93■■□□□ 1.42
RPL28-206ENST00000558752 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
RPL28-206ENST00000558752 MAP3K1Q13233 1512 aa23.92■■□□□ 1.42
RPL28-206ENST00000558752 NPHP4O75161 1426 aaPredicted RBP23.92■■□□□ 1.42
RPL28-206ENST00000558752 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
RPL28-206ENST00000558752 MED14O60244 1454 aa23.9■■□□□ 1.42
RPL28-206ENST00000558752 DEPDC5O75140 1603 aa23.9■■□□□ 1.42
RPL28-206ENST00000558752 EIF2AK4Q9P2K8 1649 aaKnown RBP23.9■■□□□ 1.42
RPL28-206ENST00000558752 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
RPL28-206ENST00000558752 MYOM3Q5VTT5 1437 aa23.89■■□□□ 1.41
RPL28-206ENST00000558752 APLP2Q06481 763 aa23.88■■□□□ 1.41
RPL28-206ENST00000558752 ABCC3O15438 1527 aa23.88■■□□□ 1.41
RPL28-206ENST00000558752 ALKQ9UM73 1620 aa23.87■■□□□ 1.41
RPL28-206ENST00000558752 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
RPL28-206ENST00000558752 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
RPL28-206ENST00000558752 ERVK-7P63135 1459 aa23.83■■□□□ 1.41
RPL28-206ENST00000558752 VWDEQ8N2E2 1590 aa23.82■■□□□ 1.4
RPL28-206ENST00000558752 IQGAP1P46940 1657 aa23.82■■□□□ 1.4
RPL28-206ENST00000558752 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
RPL28-206ENST00000558752 KANK1Q14678 1352 aa23.77■■□□□ 1.4
RPL28-206ENST00000558752 KIF15Q9NS87 1388 aa23.77■■□□□ 1.4
RPL28-206ENST00000558752 EID1Q9Y6B2 187 aa23.76■■□□□ 1.39
RPL28-206ENST00000558752 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
RPL28-206ENST00000558752 ERBINQ96RT1 1412 aa23.76■■□□□ 1.39
RPL28-206ENST00000558752 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
RPL28-206ENST00000558752 CEP152O94986 1710 aa23.75■■□□□ 1.39
RPL28-206ENST00000558752 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
RPL28-206ENST00000558752 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
RPL28-206ENST00000558752 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
RPL28-206ENST00000558752 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
RPL28-206ENST00000558752 RGS17Q9UGC6 210 aaPredicted RBP23.72■■□□□ 1.39
RPL28-206ENST00000558752 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
RPL28-206ENST00000558752 SYNMO15061 1565 aa23.72■■□□□ 1.39
RPL28-206ENST00000558752 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
RPL28-206ENST00000558752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.39
RPL28-206ENST00000558752 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
RPL28-206ENST00000558752 LRRC7Q96NW7 1537 aa23.7■■□□□ 1.38
RPL28-206ENST00000558752 ABCC5O15440 1437 aa23.7■■□□□ 1.38
RPL28-206ENST00000558752 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
RPL28-206ENST00000558752 SLIT1O75093 1534 aa23.68■■□□□ 1.38
RPL28-206ENST00000558752 STRCP1A6NGW2 1772 aa23.68■■□□□ 1.38
RPL28-206ENST00000558752 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
RPL28-206ENST00000558752 DAPK1P53355 1430 aa23.67■■□□□ 1.38
RPL28-206ENST00000558752 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
RPL28-206ENST00000558752 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
RPL28-206ENST00000558752 LTKP29376 864 aa23.65■■□□□ 1.38
RPL28-206ENST00000558752 FGD6Q6ZV73 1430 aa23.62■■□□□ 1.37
RPL28-206ENST00000558752 TMEM2Q9UHN6 1383 aa23.62■■□□□ 1.37
RPL28-206ENST00000558752 CHIC2Q9UKJ5 165 aa23.59■■□□□ 1.37
RPL28-206ENST00000558752 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
RPL28-206ENST00000558752 KDM5AP29375 1690 aaKnown RBP23.58■■□□□ 1.37
RPL28-206ENST00000558752 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
RPL28-206ENST00000558752 EFCAB6Q5THR3 1501 aa23.57■■□□□ 1.36
RPL28-206ENST00000558752 IDI1Q13907 227 aa23.56■■□□□ 1.36
RPL28-206ENST00000558752 SLC52A1Q9NWF4 448 aa23.56■■□□□ 1.36
RPL28-206ENST00000558752 KCNA6P17658 529 aa23.53■■□□□ 1.36
RPL28-206ENST00000558752 POTEAQ6S8J7 498 aa23.53■■□□□ 1.36
RPL28-206ENST00000558752 HDGFP51858 240 aaKnown RBP23.52■■□□□ 1.36
RPL28-206ENST00000558752 BCANQ96GW7 911 aa23.51■■□□□ 1.35
RPL28-206ENST00000558752 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
RPL28-206ENST00000558752 FAM50AQ14320 339 aaKnown RBP23.49■■□□□ 1.35
RPL28-206ENST00000558752 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
RPL28-206ENST00000558752 NOS1P29475 1434 aa23.49■■□□□ 1.35
RPL28-206ENST00000558752 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
RPL28-206ENST00000558752 TMEM94Q12767 1356 aa23.48■■□□□ 1.35
RPL28-206ENST00000558752 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
RPL28-206ENST00000558752 RPRD2Q5VT52 1461 aaKnown RBP23.47■■□□□ 1.35
RPL28-206ENST00000558752 SLC26A8Q96RN1 970 aa23.46■■□□□ 1.35
RPL28-206ENST00000558752 ADGRB3O60242 1522 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms