RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 TOM1O60784 492 aa21.05■□□□□ 0.96
TMED3-205ENST00000558562 NEURL4Q96JN8 1562 aa21.05■□□□□ 0.96
TMED3-205ENST00000558562 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
TMED3-205ENST00000558562 TNRQ92752 1358 aa21.04■□□□□ 0.96
TMED3-205ENST00000558562 MBD5Q9P267 1494 aa21.03■□□□□ 0.96
TMED3-205ENST00000558562 SHANK2Q9UPX8 1470 aa21.03■□□□□ 0.96
TMED3-205ENST00000558562 DHX29Q7Z478 1369 aaKnown RBP21.02■□□□□ 0.96
TMED3-205ENST00000558562 KIF3BO15066 747 aa21.02■□□□□ 0.96
TMED3-205ENST00000558562 CPS1P31327 1500 aa21.02■□□□□ 0.96
TMED3-205ENST00000558562 TIAM1Q13009 1591 aa21.02■□□□□ 0.95
TMED3-205ENST00000558562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
TMED3-205ENST00000558562 RTEL1-TNFRSF6BF6WH68 1400 aa20.99■□□□□ 0.95
TMED3-205ENST00000558562 ANKLE2Q86XL3 938 aa20.98■□□□□ 0.95
TMED3-205ENST00000558562 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
TMED3-205ENST00000558562 PZPP20742 1482 aa20.97■□□□□ 0.95
TMED3-205ENST00000558562 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
TMED3-205ENST00000558562 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
TMED3-205ENST00000558562 VWDEQ8N2E2 1590 aa20.96■□□□□ 0.95
TMED3-205ENST00000558562 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
TMED3-205ENST00000558562 THEMISQ8N1K5 641 aaPredicted RBP20.94■□□□□ 0.94
TMED3-205ENST00000558562 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
TMED3-205ENST00000558562 NPHP4O75161 1426 aaPredicted RBP20.93■□□□□ 0.94
TMED3-205ENST00000558562 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
TMED3-205ENST00000558562 MIA2Q96PC5 1412 aa20.93■□□□□ 0.94
TMED3-205ENST00000558562 EHBP1L1Q8N3D4 1523 aa20.93■□□□□ 0.94
TMED3-205ENST00000558562 UGGT1Q9NYU2 1555 aa20.92■□□□□ 0.94
TMED3-205ENST00000558562 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
TMED3-205ENST00000558562 FAM135AQ9P2D6 1515 aa20.89■□□□□ 0.94
TMED3-205ENST00000558562 NLRP1Q9C000 1473 aa20.89■□□□□ 0.94
TMED3-205ENST00000558562 MED14O60244 1454 aa20.88■□□□□ 0.93
TMED3-205ENST00000558562 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
TMED3-205ENST00000558562 DEPDC5O75140 1603 aa20.87■□□□□ 0.93
TMED3-205ENST00000558562 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
TMED3-205ENST00000558562 STRCP1A6NGW2 1772 aa20.86■□□□□ 0.93
TMED3-205ENST00000558562 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
TMED3-205ENST00000558562 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
TMED3-205ENST00000558562 RSPH4AQ5TD94 716 aa20.83■□□□□ 0.93
TMED3-205ENST00000558562 TSPY4P0CV99 314 aa20.8■□□□□ 0.92
TMED3-205ENST00000558562 TSPY10P0CW01 314 aa20.8■□□□□ 0.92
TMED3-205ENST00000558562 ABCC3O15438 1527 aa20.78■□□□□ 0.92
TMED3-205ENST00000558562 RNF17Q9BXT8 1623 aaKnown RBP20.78■□□□□ 0.92
TMED3-205ENST00000558562 ARHGEF5Q12774 1597 aa20.77■□□□□ 0.92
TMED3-205ENST00000558562 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
TMED3-205ENST00000558562 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
TMED3-205ENST00000558562 SYNMO15061 1565 aa20.76■□□□□ 0.91
TMED3-205ENST00000558562 ERVK-7P63135 1459 aa20.75■□□□□ 0.91
TMED3-205ENST00000558562 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
TMED3-205ENST00000558562 ZC3H13Q5T200 1668 aaKnown RBP20.73■□□□□ 0.91
TMED3-205ENST00000558562 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
TMED3-205ENST00000558562 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
TMED3-205ENST00000558562 UBR1Q8IWV7 1749 aa20.72■□□□□ 0.91
TMED3-205ENST00000558562 LTKP29376 864 aa20.71■□□□□ 0.91
TMED3-205ENST00000558562 CEP152O94986 1710 aa20.7■□□□□ 0.9
TMED3-205ENST00000558562 SCAF11Q99590 1463 aaKnown RBP20.7■□□□□ 0.9
TMED3-205ENST00000558562 MROH1Q8NDA8 1641 aa20.7■□□□□ 0.9
TMED3-205ENST00000558562 TXNDC2Q86VQ3 553 aa20.69■□□□□ 0.9
TMED3-205ENST00000558562 APLP2Q06481 763 aa20.68■□□□□ 0.9
TMED3-205ENST00000558562 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
TMED3-205ENST00000558562 XIRP1Q702N8 1843 aaKnown RBP20.67■□□□□ 0.9
TMED3-205ENST00000558562 EIF2AK4Q9P2K8 1649 aaKnown RBP20.67■□□□□ 0.9
TMED3-205ENST00000558562 ARHGAP23Q9P227 1491 aa20.64■□□□□ 0.89
TMED3-205ENST00000558562 SLIT1O75093 1534 aa20.63■□□□□ 0.89
TMED3-205ENST00000558562 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
TMED3-205ENST00000558562 EID1Q9Y6B2 187 aa20.62■□□□□ 0.89
TMED3-205ENST00000558562 POTEAQ6S8J7 498 aa20.61■□□□□ 0.89
TMED3-205ENST00000558562 DUOX2Q9NRD8 1548 aa20.59■□□□□ 0.89
TMED3-205ENST00000558562 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
TMED3-205ENST00000558562 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
TMED3-205ENST00000558562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.89
TMED3-205ENST00000558562 PIK3C2BO00750 1634 aa20.58■□□□□ 0.89
TMED3-205ENST00000558562 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.88
TMED3-205ENST00000558562 TMEM94Q12767 1356 aa20.58■□□□□ 0.88
TMED3-205ENST00000558562 MAP3K1Q13233 1512 aa20.58■□□□□ 0.88
TMED3-205ENST00000558562 STAG3Q9UJ98 1225 aa20.57■□□□□ 0.88
TMED3-205ENST00000558562 TMEM2Q9UHN6 1383 aa20.57■□□□□ 0.88
TMED3-205ENST00000558562 ARHGAP31Q2M1Z3 1444 aa20.56■□□□□ 0.88
TMED3-205ENST00000558562 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
TMED3-205ENST00000558562 PRDM15P57071 1507 aaPredicted RBP20.55■□□□□ 0.88
TMED3-205ENST00000558562 SLC26A8Q96RN1 970 aa20.55■□□□□ 0.88
TMED3-205ENST00000558562 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
TMED3-205ENST00000558562 MYOM3Q5VTT5 1437 aa20.54■□□□□ 0.88
TMED3-205ENST00000558562 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
TMED3-205ENST00000558562 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
TMED3-205ENST00000558562 KCNA6P17658 529 aa20.52■□□□□ 0.88
TMED3-205ENST00000558562 IDI1Q13907 227 aa20.51■□□□□ 0.87
TMED3-205ENST00000558562 EFCAB6Q5THR3 1501 aa20.5■□□□□ 0.87
TMED3-205ENST00000558562 ERBINQ96RT1 1412 aa20.5■□□□□ 0.87
TMED3-205ENST00000558562 ABCC5O15440 1437 aa20.48■□□□□ 0.87
TMED3-205ENST00000558562 TET3O43151 1660 aa20.47■□□□□ 0.87
TMED3-205ENST00000558562 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
TMED3-205ENST00000558562 KANK1Q14678 1352 aa20.46■□□□□ 0.87
TMED3-205ENST00000558562 CROCC2H7BZ55 1655 aa20.46■□□□□ 0.87
TMED3-205ENST00000558562 BCANQ96GW7 911 aa20.46■□□□□ 0.87
TMED3-205ENST00000558562 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
TMED3-205ENST00000558562 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
TMED3-205ENST00000558562 PHLPP1O60346 1717 aa20.42■□□□□ 0.86
TMED3-205ENST00000558562 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
TMED3-205ENST00000558562 MSH6P52701 1360 aa20.42■□□□□ 0.86
TMED3-205ENST00000558562 PTPN23Q9H3S7 1636 aa20.42■□□□□ 0.86
TMED3-205ENST00000558562 DAPK1P53355 1430 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms