RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
VPS18-202ENST00000558474 AGLP35573 1532 aa21.97■■□□□ 1.11
VPS18-202ENST00000558474 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
VPS18-202ENST00000558474 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
VPS18-202ENST00000558474 IQGAP3Q86VI3 1631 aa21.95■■□□□ 1.1
VPS18-202ENST00000558474 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
VPS18-202ENST00000558474 NUP155O75694 1391 aa21.92■■□□□ 1.1
VPS18-202ENST00000558474 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
VPS18-202ENST00000558474 PZPP20742 1482 aa21.91■■□□□ 1.1
VPS18-202ENST00000558474 KIF3BO15066 747 aa21.91■■□□□ 1.1
VPS18-202ENST00000558474 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
VPS18-202ENST00000558474 FAM135AQ9P2D6 1515 aa21.9■■□□□ 1.1
VPS18-202ENST00000558474 KANK1Q14678 1352 aa21.89■■□□□ 1.1
VPS18-202ENST00000558474 MROH1Q8NDA8 1641 aa21.89■■□□□ 1.09
VPS18-202ENST00000558474 MPHOSPH9Q99550 1183 aa21.89■■□□□ 1.09
VPS18-202ENST00000558474 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
VPS18-202ENST00000558474 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
VPS18-202ENST00000558474 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
VPS18-202ENST00000558474 ZC3H13Q5T200 1668 aaKnown RBP21.85■■□□□ 1.09
VPS18-202ENST00000558474 TET3O43151 1660 aa21.84■■□□□ 1.09
VPS18-202ENST00000558474 SIGLEC1Q9BZZ2 1709 aa21.81■■□□□ 1.08
VPS18-202ENST00000558474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
VPS18-202ENST00000558474 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
VPS18-202ENST00000558474 GGT6Q6P531 493 aa21.77■■□□□ 1.08
VPS18-202ENST00000558474 CEP152O94986 1710 aa21.77■■□□□ 1.08
VPS18-202ENST00000558474 ABCC3O15438 1527 aa21.76■■□□□ 1.07
VPS18-202ENST00000558474 PKD2Q13563 968 aa21.76■■□□□ 1.07
VPS18-202ENST00000558474 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
VPS18-202ENST00000558474 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
VPS18-202ENST00000558474 E9PCH4 1651 aa21.74■■□□□ 1.07
VPS18-202ENST00000558474 WASHC2CQ9Y4E1 1318 aa21.74■■□□□ 1.07
VPS18-202ENST00000558474 ANKRD30BQ9BXX2 1392 aa21.74■■□□□ 1.07
VPS18-202ENST00000558474 CAMSAP1Q5T5Y3 1602 aa21.73■■□□□ 1.07
VPS18-202ENST00000558474 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
VPS18-202ENST00000558474 ARID4BQ4LE39 1312 aaPredicted RBP21.69■■□□□ 1.06
VPS18-202ENST00000558474 TIMELESSQ9UNS1 1208 aa21.68■■□□□ 1.06
VPS18-202ENST00000558474 CNTLNQ9NXG0 1405 aa21.68■■□□□ 1.06
VPS18-202ENST00000558474 SPHKAPQ2M3C7 1700 aa21.68■■□□□ 1.06
VPS18-202ENST00000558474 PTPRTO14522 1441 aa21.67■■□□□ 1.06
VPS18-202ENST00000558474 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
VPS18-202ENST00000558474 CLTCQ00610 1675 aaKnown RBP21.66■■□□□ 1.06
VPS18-202ENST00000558474 TRPM2O94759 1503 aa21.65■■□□□ 1.06
VPS18-202ENST00000558474 FOXD1Q16676 465 aa21.64■■□□□ 1.05
VPS18-202ENST00000558474 NPATQ14207 1427 aa21.63■■□□□ 1.05
VPS18-202ENST00000558474 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
VPS18-202ENST00000558474 PLA2R1Q13018 1463 aa21.61■■□□□ 1.05
VPS18-202ENST00000558474 FER1L4A9Z1Z3 1794 aa21.61■■□□□ 1.05
VPS18-202ENST00000558474 MLECQ14165 292 aa21.6■■□□□ 1.05
VPS18-202ENST00000558474 CCDC144AA2RUR9 1427 aa21.59■■□□□ 1.05
VPS18-202ENST00000558474 NOS1P29475 1434 aa21.58■■□□□ 1.05
VPS18-202ENST00000558474 SIN3AQ96ST3 1273 aa21.58■■□□□ 1.05
VPS18-202ENST00000558474 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.05
VPS18-202ENST00000558474 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
VPS18-202ENST00000558474 ADAMTSL3P82987 1691 aa21.56■■□□□ 1.04
VPS18-202ENST00000558474 ZMYM3Q14202 1370 aa21.55■■□□□ 1.04
VPS18-202ENST00000558474 SPATA31D1Q6ZQQ2 1576 aa21.54■■□□□ 1.04
VPS18-202ENST00000558474 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
VPS18-202ENST00000558474 TONSLQ96HA7 1378 aa21.53■■□□□ 1.04
VPS18-202ENST00000558474 ERVK-7P63135 1459 aa21.52■■□□□ 1.04
VPS18-202ENST00000558474 PIK3C2BO00750 1634 aa21.52■■□□□ 1.04
VPS18-202ENST00000558474 CLTCL1P53675 1640 aa21.52■■□□□ 1.04
VPS18-202ENST00000558474 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
VPS18-202ENST00000558474 KIF1BO60333 1816 aa21.51■■□□□ 1.03
VPS18-202ENST00000558474 SYNMO15061 1565 aa21.5■■□□□ 1.03
VPS18-202ENST00000558474 SLC52A1Q9NWF4 448 aa21.5■■□□□ 1.03
VPS18-202ENST00000558474 MADDQ8WXG6 1647 aa21.5■■□□□ 1.03
VPS18-202ENST00000558474 C3P01024 1663 aa21.49■■□□□ 1.03
VPS18-202ENST00000558474 RIMS1Q86UR5 1692 aaKnown RBP21.46■■□□□ 1.03
VPS18-202ENST00000558474 SPATA31E1Q6ZUB1 1445 aa21.45■■□□□ 1.02
VPS18-202ENST00000558474 STAC3Q96MF2 364 aa21.43■■□□□ 1.02
VPS18-202ENST00000558474 ADGRB3O60242 1522 aa21.42■■□□□ 1.02
VPS18-202ENST00000558474 KDM5AP29375 1690 aaKnown RBP21.42■■□□□ 1.02
VPS18-202ENST00000558474 UGGT1Q9NYU2 1555 aa21.42■■□□□ 1.02
VPS18-202ENST00000558474 FBXO31Q5XUX0 539 aaPredicted RBP21.41■■□□□ 1.02
VPS18-202ENST00000558474 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
VPS18-202ENST00000558474 L3MBTL2Q969R5 705 aa21.4■■□□□ 1.02
VPS18-202ENST00000558474 TNRQ92752 1358 aa21.39■■□□□ 1.02
VPS18-202ENST00000558474 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
VPS18-202ENST00000558474 IDI1Q13907 227 aa21.37■■□□□ 1.01
VPS18-202ENST00000558474 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
VPS18-202ENST00000558474 RPGRIP1LQ68CZ1 1315 aa21.36■■□□□ 1.01
VPS18-202ENST00000558474 IFT172Q9UG01 1749 aa21.35■■□□□ 1.01
VPS18-202ENST00000558474 UHRF1BP1Q6BDS2 1440 aa21.34■■□□□ 1.01
VPS18-202ENST00000558474 SETD1BQ9UPS6 1966 aaKnown RBP21.33■■□□□ 1.01
VPS18-202ENST00000558474 PTPRMP28827 1452 aa21.32■■□□□ 1
VPS18-202ENST00000558474 PPLO60437 1756 aa21.31■■□□□ 1
VPS18-202ENST00000558474 CEBPAP49715 358 aaPredicted RBP21.31■■□□□ 1
VPS18-202ENST00000558474 RGL3Q3MIN7 710 aa21.31■■□□□ 1
VPS18-202ENST00000558474 MYOM2P54296 1465 aa21.31■■□□□ 1
VPS18-202ENST00000558474 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
VPS18-202ENST00000558474 DCAF11Q8TEB1 546 aa21.3■■□□□ 1
VPS18-202ENST00000558474 MYO3AQ8NEV4 1616 aa21.29■■□□□ 1
VPS18-202ENST00000558474 UBR1Q8IWV7 1749 aa21.29■■□□□ 1
VPS18-202ENST00000558474 A2ML1A8K2U0 1454 aa21.28■■□□□ 1
VPS18-202ENST00000558474 CHGAP10645 457 aaKnown RBP21.27■■□□□ 1
VPS18-202ENST00000558474 ZFYVE9O95405 1425 aa21.27■■□□□ 1
VPS18-202ENST00000558474 NEXMIFQ5QGS0 1516 aa21.26■□□□□ 0.99
VPS18-202ENST00000558474 ZNF142P52746 1687 aaPredicted RBP21.26■□□□□ 0.99
VPS18-202ENST00000558474 ZNF326Q5BKZ1 582 aaKnown RBP21.26■□□□□ 0.99
VPS18-202ENST00000558474 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms