RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
LRRC28-206ENST00000558471 ERBINQ96RT1 1412 aa19■□□□□ 0.63
LRRC28-206ENST00000558471 ROCK1Q13464 1354 aa19■□□□□ 0.63
LRRC28-206ENST00000558471 CLTCQ00610 1675 aaKnown RBP19■□□□□ 0.63
LRRC28-206ENST00000558471 RNF17Q9BXT8 1623 aaKnown RBP18.99■□□□□ 0.63
LRRC28-206ENST00000558471 CNTLNQ9NXG0 1405 aa18.99■□□□□ 0.63
LRRC28-206ENST00000558471 C3P01024 1663 aa18.98■□□□□ 0.63
LRRC28-206ENST00000558471 ZMYM3Q14202 1370 aa18.96■□□□□ 0.63
LRRC28-206ENST00000558471 MROH2AA6NES4 1674 aa18.96■□□□□ 0.63
LRRC28-206ENST00000558471 ANKRD50Q9ULJ7 1429 aa18.96■□□□□ 0.63
LRRC28-206ENST00000558471 WASHC2CQ9Y4E1 1318 aa18.96■□□□□ 0.63
LRRC28-206ENST00000558471 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
LRRC28-206ENST00000558471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.93■□□□□ 0.62
LRRC28-206ENST00000558471 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
LRRC28-206ENST00000558471 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
LRRC28-206ENST00000558471 SETD1BQ9UPS6 1966 aaKnown RBP18.92■□□□□ 0.62
LRRC28-206ENST00000558471 FAM135AQ9P2D6 1515 aa18.91■□□□□ 0.62
LRRC28-206ENST00000558471 CEP152O94986 1710 aa18.9■□□□□ 0.62
LRRC28-206ENST00000558471 ABCC3O15438 1527 aa18.9■□□□□ 0.62
LRRC28-206ENST00000558471 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
LRRC28-206ENST00000558471 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
LRRC28-206ENST00000558471 NAIPQ13075 1403 aa18.86■□□□□ 0.61
LRRC28-206ENST00000558471 KANK1Q14678 1352 aa18.86■□□□□ 0.61
LRRC28-206ENST00000558471 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
LRRC28-206ENST00000558471 FBXO31Q5XUX0 539 aaPredicted RBP18.85■□□□□ 0.61
LRRC28-206ENST00000558471 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
LRRC28-206ENST00000558471 VWDEQ8N2E2 1590 aa18.85■□□□□ 0.61
LRRC28-206ENST00000558471 NPATQ14207 1427 aa18.84■□□□□ 0.61
LRRC28-206ENST00000558471 CAMSAP1Q5T5Y3 1602 aa18.84■□□□□ 0.61
LRRC28-206ENST00000558471 PZPP20742 1482 aa18.84■□□□□ 0.61
LRRC28-206ENST00000558471 HFM1A2PYH4 1435 aa18.83■□□□□ 0.61
LRRC28-206ENST00000558471 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
LRRC28-206ENST00000558471 UNC13BO14795 1591 aa18.83■□□□□ 0.6
LRRC28-206ENST00000558471 LMTK3Q96Q04 1460 aa18.83■□□□□ 0.6
LRRC28-206ENST00000558471 LMTK2Q8IWU2 1503 aa18.8■□□□□ 0.6
LRRC28-206ENST00000558471 ARHGAP31Q2M1Z3 1444 aa18.78■□□□□ 0.6
LRRC28-206ENST00000558471 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
LRRC28-206ENST00000558471 HSPA2P54652 639 aa18.78■□□□□ 0.6
LRRC28-206ENST00000558471 NUP155O75694 1391 aa18.78■□□□□ 0.6
LRRC28-206ENST00000558471 IQGAP3Q86VI3 1631 aa18.76■□□□□ 0.59
LRRC28-206ENST00000558471 TNRQ92752 1358 aa18.76■□□□□ 0.59
LRRC28-206ENST00000558471 ERVK-7P63135 1459 aa18.75■□□□□ 0.59
LRRC28-206ENST00000558471 SPATA31D1Q6ZQQ2 1576 aa18.75■□□□□ 0.59
LRRC28-206ENST00000558471 TET3O43151 1660 aa18.75■□□□□ 0.59
LRRC28-206ENST00000558471 EFCAB6Q5THR3 1501 aa18.74■□□□□ 0.59
LRRC28-206ENST00000558471 MYO3AQ8NEV4 1616 aa18.74■□□□□ 0.59
LRRC28-206ENST00000558471 TRIM52Q96A61 297 aa18.71■□□□□ 0.59
LRRC28-206ENST00000558471 SETD5Q9C0A6 1442 aa18.71■□□□□ 0.59
LRRC28-206ENST00000558471 E9PCH4 1651 aa18.7■□□□□ 0.58
LRRC28-206ENST00000558471 ZNF142P52746 1687 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-206ENST00000558471 CEP170BQ9Y4F5 1589 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-206ENST00000558471 A2ML1A8K2U0 1454 aa18.69■□□□□ 0.58
LRRC28-206ENST00000558471 RPRD2Q5VT52 1461 aaKnown RBP18.69■□□□□ 0.58
LRRC28-206ENST00000558471 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
LRRC28-206ENST00000558471 NOS1P29475 1434 aa18.67■□□□□ 0.58
LRRC28-206ENST00000558471 SYNMO15061 1565 aa18.65■□□□□ 0.58
LRRC28-206ENST00000558471 RAB3GAP2Q9H2M9 1393 aa18.65■□□□□ 0.58
LRRC28-206ENST00000558471 STRCQ7RTU9 1775 aa18.64■□□□□ 0.57
LRRC28-206ENST00000558471 IDI1Q13907 227 aa18.63■□□□□ 0.57
LRRC28-206ENST00000558471 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
LRRC28-206ENST00000558471 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
LRRC28-206ENST00000558471 PIK3C2BO00750 1634 aa18.61■□□□□ 0.57
LRRC28-206ENST00000558471 PKD2Q13563 968 aa18.61■□□□□ 0.57
LRRC28-206ENST00000558471 THEMISQ8N1K5 641 aaPredicted RBP18.61■□□□□ 0.57
LRRC28-206ENST00000558471 SLC52A1Q9NWF4 448 aa18.61■□□□□ 0.57
LRRC28-206ENST00000558471 UBR1Q8IWV7 1749 aa18.6■□□□□ 0.57
LRRC28-206ENST00000558471 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
LRRC28-206ENST00000558471 MPHOSPH9Q99550 1183 aa18.59■□□□□ 0.57
LRRC28-206ENST00000558471 SPHKAPQ2M3C7 1700 aa18.58■□□□□ 0.57
LRRC28-206ENST00000558471 HRCP23327 699 aa18.58■□□□□ 0.56
LRRC28-206ENST00000558471 PLA2R1Q13018 1463 aa18.58■□□□□ 0.56
LRRC28-206ENST00000558471 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
LRRC28-206ENST00000558471 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
LRRC28-206ENST00000558471 PTPRTO14522 1441 aa18.57■□□□□ 0.56
LRRC28-206ENST00000558471 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
LRRC28-206ENST00000558471 FOXD1Q16676 465 aa18.55■□□□□ 0.56
LRRC28-206ENST00000558471 KDM5AP29375 1690 aaKnown RBP18.54■□□□□ 0.56
LRRC28-206ENST00000558471 MYO5BQ9ULV0 1848 aa18.54■□□□□ 0.56
LRRC28-206ENST00000558471 ANKLE2Q86XL3 938 aa18.53■□□□□ 0.56
LRRC28-206ENST00000558471 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
LRRC28-206ENST00000558471 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.55
LRRC28-206ENST00000558471 ADGRB3O60242 1522 aa18.51■□□□□ 0.55
LRRC28-206ENST00000558471 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
LRRC28-206ENST00000558471 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
LRRC28-206ENST00000558471 TRPM2O94759 1503 aa18.5■□□□□ 0.55
LRRC28-206ENST00000558471 ARHGAP23Q9P227 1491 aa18.5■□□□□ 0.55
LRRC28-206ENST00000558471 SLIT1O75093 1534 aa18.49■□□□□ 0.55
LRRC28-206ENST00000558471 CLTCL1P53675 1640 aa18.49■□□□□ 0.55
LRRC28-206ENST00000558471 LTKP29376 864 aa18.49■□□□□ 0.55
LRRC28-206ENST00000558471 TMEM2Q9UHN6 1383 aa18.49■□□□□ 0.55
LRRC28-206ENST00000558471 NEURL4Q96JN8 1562 aa18.48■□□□□ 0.55
LRRC28-206ENST00000558471 TXNDC2Q86VQ3 553 aa18.48■□□□□ 0.55
LRRC28-206ENST00000558471 KIF1BO60333 1816 aa18.46■□□□□ 0.55
LRRC28-206ENST00000558471 EID1Q9Y6B2 187 aa18.45■□□□□ 0.54
LRRC28-206ENST00000558471 MED14O60244 1454 aa18.45■□□□□ 0.54
LRRC28-206ENST00000558471 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
LRRC28-206ENST00000558471 NPHP4O75161 1426 aaPredicted RBP18.44■□□□□ 0.54
LRRC28-206ENST00000558471 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
LRRC28-206ENST00000558471 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
LRRC28-206ENST00000558471 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms