RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
RTF1-205ENST00000558298 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
RTF1-205ENST00000558298 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
RTF1-205ENST00000558298 NPATQ14207 1427 aa12.03□□□□□ -0.48
RTF1-205ENST00000558298 KDM5DQ9BY66 1539 aa12.03□□□□□ -0.48
RTF1-205ENST00000558298 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
RTF1-205ENST00000558298 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
RTF1-205ENST00000558298 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
RTF1-205ENST00000558298 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
RTF1-205ENST00000558298 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
RTF1-205ENST00000558298 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
RTF1-205ENST00000558298 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.48
RTF1-205ENST00000558298 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
RTF1-205ENST00000558298 NCOA1Q15788 1441 aa12.02□□□□□ -0.49
RTF1-205ENST00000558298 MYO3AQ8NEV4 1616 aa12.01□□□□□ -0.49
RTF1-205ENST00000558298 STRCQ7RTU9 1775 aa12□□□□□ -0.49
RTF1-205ENST00000558298 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
RTF1-205ENST00000558298 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
RTF1-205ENST00000558298 PTPRKQ15262 1439 aa12□□□□□ -0.49
RTF1-205ENST00000558298 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
RTF1-205ENST00000558298 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
RTF1-205ENST00000558298 KIF15Q9NS87 1388 aa11.99□□□□□ -0.49
RTF1-205ENST00000558298 VWDEQ8N2E2 1590 aa11.99□□□□□ -0.49
RTF1-205ENST00000558298 UHRF1BP1Q6BDS2 1440 aa11.98□□□□□ -0.49
RTF1-205ENST00000558298 ABCC3O15438 1527 aa11.97□□□□□ -0.49
RTF1-205ENST00000558298 PZPP20742 1482 aa11.97□□□□□ -0.49
RTF1-205ENST00000558298 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
RTF1-205ENST00000558298 UNC13BO14795 1591 aa11.96□□□□□ -0.49
RTF1-205ENST00000558298 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.49
RTF1-205ENST00000558298 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.5
RTF1-205ENST00000558298 CEP152O94986 1710 aa11.94□□□□□ -0.5
RTF1-205ENST00000558298 CAMSAP1Q5T5Y3 1602 aa11.94□□□□□ -0.5
RTF1-205ENST00000558298 SPATA31D1Q6ZQQ2 1576 aa11.94□□□□□ -0.5
RTF1-205ENST00000558298 HSPA2P54652 639 aa11.94□□□□□ -0.5
RTF1-205ENST00000558298 KIF3BO15066 747 aa11.93□□□□□ -0.5
RTF1-205ENST00000558298 GGT6Q6P531 493 aa11.93□□□□□ -0.5
RTF1-205ENST00000558298 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
RTF1-205ENST00000558298 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
RTF1-205ENST00000558298 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
RTF1-205ENST00000558298 ARHGAP31Q2M1Z3 1444 aa11.92□□□□□ -0.5
RTF1-205ENST00000558298 HFM1A2PYH4 1435 aa11.91□□□□□ -0.5
RTF1-205ENST00000558298 A2ML1A8K2U0 1454 aa11.9□□□□□ -0.5
RTF1-205ENST00000558298 IQGAP3Q86VI3 1631 aa11.9□□□□□ -0.5
RTF1-205ENST00000558298 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
RTF1-205ENST00000558298 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
RTF1-205ENST00000558298 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
RTF1-205ENST00000558298 TET3O43151 1660 aa11.89□□□□□ -0.51
RTF1-205ENST00000558298 EFCAB6Q5THR3 1501 aa11.89□□□□□ -0.51
RTF1-205ENST00000558298 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
RTF1-205ENST00000558298 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
RTF1-205ENST00000558298 PTPRTO14522 1441 aa11.88□□□□□ -0.51
RTF1-205ENST00000558298 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
RTF1-205ENST00000558298 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
RTF1-205ENST00000558298 NAIPQ13075 1403 aa11.87□□□□□ -0.51
RTF1-205ENST00000558298 NEURL4Q96JN8 1562 aa11.87□□□□□ -0.51
RTF1-205ENST00000558298 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
RTF1-205ENST00000558298 POLR1AO95602 1720 aaPredicted RBP11.86□□□□□ -0.51
RTF1-205ENST00000558298 TNRQ92752 1358 aa11.86□□□□□ -0.51
RTF1-205ENST00000558298 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
RTF1-205ENST00000558298 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
RTF1-205ENST00000558298 KANK1Q14678 1352 aa11.84□□□□□ -0.51
RTF1-205ENST00000558298 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
RTF1-205ENST00000558298 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
RTF1-205ENST00000558298 LTBP4Q8N2S1 1624 aa11.84□□□□□ -0.51
RTF1-205ENST00000558298 SYNMO15061 1565 aa11.83□□□□□ -0.52
RTF1-205ENST00000558298 CHIC2Q9UKJ5 165 aa11.82□□□□□ -0.52
RTF1-205ENST00000558298 UGGT1Q9NYU2 1555 aa11.82□□□□□ -0.52
RTF1-205ENST00000558298 NOS1P29475 1434 aa11.81□□□□□ -0.52
RTF1-205ENST00000558298 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
RTF1-205ENST00000558298 MED14O60244 1454 aa11.8□□□□□ -0.52
RTF1-205ENST00000558298 E9PCH4 1651 aa11.8□□□□□ -0.52
RTF1-205ENST00000558298 ARHGAP23Q9P227 1491 aa11.79□□□□□ -0.52
RTF1-205ENST00000558298 SLIT1O75093 1534 aa11.79□□□□□ -0.52
RTF1-205ENST00000558298 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
RTF1-205ENST00000558298 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
RTF1-205ENST00000558298 PKD2Q13563 968 aa11.77□□□□□ -0.53
RTF1-205ENST00000558298 IQSEC2Q5JU85 1478 aa11.76□□□□□ -0.53
RTF1-205ENST00000558298 SPHKAPQ2M3C7 1700 aa11.76□□□□□ -0.53
RTF1-205ENST00000558298 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
RTF1-205ENST00000558298 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
RTF1-205ENST00000558298 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
RTF1-205ENST00000558298 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
RTF1-205ENST00000558298 NUP155O75694 1391 aa11.73□□□□□ -0.53
RTF1-205ENST00000558298 TRPM2O94759 1503 aa11.73□□□□□ -0.53
RTF1-205ENST00000558298 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
RTF1-205ENST00000558298 SETD5Q9C0A6 1442 aa11.72□□□□□ -0.53
RTF1-205ENST00000558298 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
RTF1-205ENST00000558298 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
RTF1-205ENST00000558298 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
RTF1-205ENST00000558298 NPHP4O75161 1426 aaPredicted RBP11.71□□□□□ -0.53
RTF1-205ENST00000558298 ITGAEP38570 1179 aa11.71□□□□□ -0.53
RTF1-205ENST00000558298 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
RTF1-205ENST00000558298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■□□□□ 11
RTF1-205ENST00000558298 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.54
RTF1-205ENST00000558298 SCAF11Q99590 1463 aaKnown RBP11.7□□□□□ -0.54
RTF1-205ENST00000558298 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
RTF1-205ENST00000558298 ZNF335Q9H4Z2 1342 aaPredicted RBP11.69□□□□□ -0.54
RTF1-205ENST00000558298 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
RTF1-205ENST00000558298 CPS1P31327 1500 aa11.69□□□□□ -0.54
RTF1-205ENST00000558298 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms