RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
RORA-207ENST00000558234 TET3O43151 1660 aa17.53■□□□□ 0.4
RORA-207ENST00000558234 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
RORA-207ENST00000558234 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.39
RORA-207ENST00000558234 MADDQ8WXG6 1647 aa17.51■□□□□ 0.39
RORA-207ENST00000558234 ABCC3O15438 1527 aa17.51■□□□□ 0.39
RORA-207ENST00000558234 C3P01024 1663 aa17.5■□□□□ 0.39
RORA-207ENST00000558234 E9PCH4 1651 aa17.5■□□□□ 0.39
RORA-207ENST00000558234 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
RORA-207ENST00000558234 EFCAB6Q5THR3 1501 aa17.48■□□□□ 0.39
RORA-207ENST00000558234 PZPP20742 1482 aa17.47■□□□□ 0.39
RORA-207ENST00000558234 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
RORA-207ENST00000558234 PIK3C2BO00750 1634 aa17.45■□□□□ 0.38
RORA-207ENST00000558234 RIMS1Q86UR5 1692 aaKnown RBP17.44■□□□□ 0.38
RORA-207ENST00000558234 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
RORA-207ENST00000558234 HRCP23327 699 aa17.43■□□□□ 0.38
RORA-207ENST00000558234 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
RORA-207ENST00000558234 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
RORA-207ENST00000558234 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
RORA-207ENST00000558234 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
RORA-207ENST00000558234 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
RORA-207ENST00000558234 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
RORA-207ENST00000558234 KDM5AP29375 1690 aaKnown RBP17.41■□□□□ 0.38
RORA-207ENST00000558234 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
RORA-207ENST00000558234 SYNMO15061 1565 aa17.38■□□□□ 0.37
RORA-207ENST00000558234 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
RORA-207ENST00000558234 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
RORA-207ENST00000558234 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
RORA-207ENST00000558234 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
RORA-207ENST00000558234 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
RORA-207ENST00000558234 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
RORA-207ENST00000558234 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
RORA-207ENST00000558234 MYO3AQ8NEV4 1616 aa17.33■□□□□ 0.37
RORA-207ENST00000558234 PTPRTO14522 1441 aa17.32■□□□□ 0.36
RORA-207ENST00000558234 TRPM2O94759 1503 aa17.32■□□□□ 0.36
RORA-207ENST00000558234 NOS1P29475 1434 aa17.31■□□□□ 0.36
RORA-207ENST00000558234 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
RORA-207ENST00000558234 NPATQ14207 1427 aa17.3■□□□□ 0.36
RORA-207ENST00000558234 PLA2R1Q13018 1463 aa17.3■□□□□ 0.36
RORA-207ENST00000558234 PTPRMP28827 1452 aa17.29■□□□□ 0.36
RORA-207ENST00000558234 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
RORA-207ENST00000558234 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
RORA-207ENST00000558234 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
RORA-207ENST00000558234 UBR1Q8IWV7 1749 aa17.27■□□□□ 0.36
RORA-207ENST00000558234 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
RORA-207ENST00000558234 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
RORA-207ENST00000558234 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
RORA-207ENST00000558234 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
RORA-207ENST00000558234 KIF3BO15066 747 aa17.22■□□□□ 0.35
RORA-207ENST00000558234 ITGAEP38570 1179 aa17.22■□□□□ 0.35
RORA-207ENST00000558234 ADGRB3O60242 1522 aa17.2■□□□□ 0.34
RORA-207ENST00000558234 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
RORA-207ENST00000558234 KIF1BO60333 1816 aa17.19■□□□□ 0.34
RORA-207ENST00000558234 PPLO60437 1756 aa17.18■□□□□ 0.34
RORA-207ENST00000558234 NUP155O75694 1391 aa17.17■□□□□ 0.34
RORA-207ENST00000558234 UGGT1Q9NYU2 1555 aa17.17■□□□□ 0.34
RORA-207ENST00000558234 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
RORA-207ENST00000558234 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
RORA-207ENST00000558234 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
RORA-207ENST00000558234 CFAP65Q6ZU64 1925 aaKnown RBP17.16■□□□□ 0.34
RORA-207ENST00000558234 KANK1Q14678 1352 aa17.15■□□□□ 0.34
RORA-207ENST00000558234 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
RORA-207ENST00000558234 NLRP1Q9C000 1473 aa17.14■□□□□ 0.33
RORA-207ENST00000558234 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
RORA-207ENST00000558234 POLR1AO95602 1720 aaPredicted RBP17.14■□□□□ 0.33
RORA-207ENST00000558234 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
RORA-207ENST00000558234 SLIT1O75093 1534 aa17.12■□□□□ 0.33
RORA-207ENST00000558234 STRCQ7RTU9 1775 aa17.12■□□□□ 0.33
RORA-207ENST00000558234 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
RORA-207ENST00000558234 ARHGAP23Q9P227 1491 aa17.11■□□□□ 0.33
RORA-207ENST00000558234 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
RORA-207ENST00000558234 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
RORA-207ENST00000558234 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
RORA-207ENST00000558234 NEXMIFQ5QGS0 1516 aa17.1■□□□□ 0.33
RORA-207ENST00000558234 GGT6Q6P531 493 aa17.09■□□□□ 0.33
RORA-207ENST00000558234 NRXN3Q9Y4C0 1643 aa17.09■□□□□ 0.33
RORA-207ENST00000558234 WASHC2CQ9Y4E1 1318 aa17.08■□□□□ 0.33
RORA-207ENST00000558234 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
RORA-207ENST00000558234 NRXN1Q9ULB1 1477 aa17.06■□□□□ 0.32
RORA-207ENST00000558234 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
RORA-207ENST00000558234 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
RORA-207ENST00000558234 TNRQ92752 1358 aa17.04■□□□□ 0.32
RORA-207ENST00000558234 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
RORA-207ENST00000558234 MLECQ14165 292 aa17.01■□□□□ 0.31
RORA-207ENST00000558234 FBXO31Q5XUX0 539 aaPredicted RBP17.01■□□□□ 0.31
RORA-207ENST00000558234 PKD2Q13563 968 aa17.01■□□□□ 0.31
RORA-207ENST00000558234 IQGAP1P46940 1657 aa17■□□□□ 0.31
RORA-207ENST00000558234 SETBP1Q9Y6X0 1596 aa16.99■□□□□ 0.31
RORA-207ENST00000558234 MED14O60244 1454 aa16.99■□□□□ 0.31
RORA-207ENST00000558234 MYOM2P54296 1465 aa16.99■□□□□ 0.31
RORA-207ENST00000558234 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
RORA-207ENST00000558234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.31
RORA-207ENST00000558234 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
RORA-207ENST00000558234 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
RORA-207ENST00000558234 LAMC1P11047 1609 aa16.95■□□□□ 0.3
RORA-207ENST00000558234 UHRF1BP1Q6BDS2 1440 aa16.94■□□□□ 0.3
RORA-207ENST00000558234 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
RORA-207ENST00000558234 FOXD1Q16676 465 aa16.93■□□□□ 0.3
RORA-207ENST00000558234 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
RORA-207ENST00000558234 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms