RNA–Protein interactions for RNA: ENST00000557950.5

SLTM-213, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 924 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-213ENST00000557950 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
SLTM-213ENST00000557950 TCOF1Q13428 1488 aaKnown RBP11.85□□□□□ -0.51
SLTM-213ENST00000557950 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
SLTM-213ENST00000557950 SUPT6HQ7KZ85 1726 aaKnown RBP11.85□□□□□ -0.51
SLTM-213ENST00000557950 CASKIN1Q8WXD9 1431 aa11.85□□□□□ -0.51
SLTM-213ENST00000557950 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
SLTM-213ENST00000557950 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
SLTM-213ENST00000557950 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
SLTM-213ENST00000557950 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
SLTM-213ENST00000557950 ATP7AQ04656 1500 aa11.82□□□□□ -0.52
SLTM-213ENST00000557950 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
SLTM-213ENST00000557950 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
SLTM-213ENST00000557950 POLA2Q14181 598 aa11.82□□□□□ -0.52
SLTM-213ENST00000557950 INO80Q9ULG1 1556 aaPredicted RBP11.82□□□□□ -0.52
SLTM-213ENST00000557950 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
SLTM-213ENST00000557950 A2MP01023 1474 aa11.79□□□□□ -0.52
SLTM-213ENST00000557950 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
SLTM-213ENST00000557950 HNRNPMP52272 730 aaKnown RBP eCLIP11.79□□□□□ -0.526e-9■■■■■ 29.9
SLTM-213ENST00000557950 PKD2Q13563 968 aa11.79□□□□□ -0.52
SLTM-213ENST00000557950 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
SLTM-213ENST00000557950 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
SLTM-213ENST00000557950 MED1Q15648 1581 aaPredicted RBP11.76□□□□□ -0.53
SLTM-213ENST00000557950 NEURL4Q96JN8 1562 aa11.76□□□□□ -0.53
SLTM-213ENST00000557950 DNMT1P26358 1616 aaKnown RBP11.76□□□□□ -0.53
SLTM-213ENST00000557950 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
SLTM-213ENST00000557950 GGT6Q6P531 493 aa11.75□□□□□ -0.53
SLTM-213ENST00000557950 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
SLTM-213ENST00000557950 ADGBQ8N7X0 1667 aa11.75□□□□□ -0.53
SLTM-213ENST00000557950 POLR1AO95602 1720 aaPredicted RBP11.74□□□□□ -0.53
SLTM-213ENST00000557950 HSPA1LP34931 641 aa11.74□□□□□ -0.53
SLTM-213ENST00000557950 CFDP1Q9UEE9 299 aaPredicted RBP11.73□□□□□ -0.53
SLTM-213ENST00000557950 ALKQ9UM73 1620 aa11.72□□□□□ -0.53
SLTM-213ENST00000557950 CPS1P31327 1500 aa11.71□□□□□ -0.53
SLTM-213ENST00000557950 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
SLTM-213ENST00000557950 SHANK2Q9UPX8 1470 aa11.71□□□□□ -0.53
SLTM-213ENST00000557950 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
SLTM-213ENST00000557950 VWDEQ8N2E2 1590 aa11.71□□□□□ -0.54
SLTM-213ENST00000557950 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
SLTM-213ENST00000557950 ZNF644Q9H582 1327 aaPredicted RBP11.7□□□□□ -0.54
SLTM-213ENST00000557950 PIP4K2BP78356 416 aa11.7□□□□□ -0.54
SLTM-213ENST00000557950 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
SLTM-213ENST00000557950 TNRQ92752 1358 aa11.69□□□□□ -0.54
SLTM-213ENST00000557950 FBXO31Q5XUX0 539 aaPredicted RBP11.69□□□□□ -0.54
SLTM-213ENST00000557950 PZPP20742 1482 aa11.69□□□□□ -0.54
SLTM-213ENST00000557950 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
SLTM-213ENST00000557950 DHX29Q7Z478 1369 aaKnown RBP11.67□□□□□ -0.54
SLTM-213ENST00000557950 KDM5DQ9BY66 1539 aa11.67□□□□□ -0.54
SLTM-213ENST00000557950 TOM1O60784 492 aa11.67□□□□□ -0.54
SLTM-213ENST00000557950 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
SLTM-213ENST00000557950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
SLTM-213ENST00000557950 STRCP1A6NGW2 1772 aa11.66□□□□□ -0.54
SLTM-213ENST00000557950 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
SLTM-213ENST00000557950 MED14O60244 1454 aa11.65□□□□□ -0.54
SLTM-213ENST00000557950 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
SLTM-213ENST00000557950 KIF3BO15066 747 aa11.64□□□□□ -0.55
SLTM-213ENST00000557950 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
SLTM-213ENST00000557950 NLRP1Q9C000 1473 aa11.63□□□□□ -0.55
SLTM-213ENST00000557950 UGGT1Q9NYU2 1555 aa11.63□□□□□ -0.55
SLTM-213ENST00000557950 NPHP4O75161 1426 aaPredicted RBP11.63□□□□□ -0.55
SLTM-213ENST00000557950 CEP162Q5TB80 1403 aa11.63□□□□□ -0.55
SLTM-213ENST00000557950 MIA2Q96PC5 1412 aa11.63□□□□□ -0.55
SLTM-213ENST00000557950 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
SLTM-213ENST00000557950 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
SLTM-213ENST00000557950 ANKLE2Q86XL3 938 aa11.62□□□□□ -0.55
SLTM-213ENST00000557950 LRRC7Q96NW7 1537 aa11.61□□□□□ -0.55
SLTM-213ENST00000557950 CAMSAP2Q08AD1 1489 aa11.61□□□□□ -0.55
SLTM-213ENST00000557950 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
SLTM-213ENST00000557950 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
SLTM-213ENST00000557950 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
SLTM-213ENST00000557950 SYNMO15061 1565 aa11.59□□□□□ -0.55
SLTM-213ENST00000557950 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
SLTM-213ENST00000557950 ABCC3O15438 1527 aa11.58□□□□□ -0.56
SLTM-213ENST00000557950 CFAP65Q6ZU64 1925 aaKnown RBP11.58□□□□□ -0.56
SLTM-213ENST00000557950 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
SLTM-213ENST00000557950 ARHGEF5Q12774 1597 aa11.57□□□□□ -0.56
SLTM-213ENST00000557950 ERVK-7P63135 1459 aa11.57□□□□□ -0.56
SLTM-213ENST00000557950 XIRP1Q702N8 1843 aaKnown RBP11.56□□□□□ -0.56
SLTM-213ENST00000557950 RGS17Q9UGC6 210 aaPredicted RBP11.56□□□□□ -0.56
SLTM-213ENST00000557950 MROH1Q8NDA8 1641 aa11.56□□□□□ -0.56
SLTM-213ENST00000557950 UBR1Q8IWV7 1749 aa11.55□□□□□ -0.56
SLTM-213ENST00000557950 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
SLTM-213ENST00000557950 CEP152O94986 1710 aa11.52□□□□□ -0.56
SLTM-213ENST00000557950 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
SLTM-213ENST00000557950 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.57
SLTM-213ENST00000557950 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
SLTM-213ENST00000557950 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
SLTM-213ENST00000557950 SLIT1O75093 1534 aa11.5□□□□□ -0.57
SLTM-213ENST00000557950 LTKP29376 864 aa11.5□□□□□ -0.57
SLTM-213ENST00000557950 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
SLTM-213ENST00000557950 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
SLTM-213ENST00000557950 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
SLTM-213ENST00000557950 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
SLTM-213ENST00000557950 POTEAQ6S8J7 498 aa11.47□□□□□ -0.57
SLTM-213ENST00000557950 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
SLTM-213ENST00000557950 PRDM15P57071 1507 aaPredicted RBP11.46□□□□□ -0.57
SLTM-213ENST00000557950 PIK3C2BO00750 1634 aa11.46□□□□□ -0.58
SLTM-213ENST00000557950 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
SLTM-213ENST00000557950 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
SLTM-213ENST00000557950 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
SLTM-213ENST00000557950 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms